justIN           Dashboard       Workflows       Jobs       AWT       Sites       Storages       Docs       Login

Jobsub ID 101240.182@dunegpschedd02.fnal.gov

Jobsub ID101240.182@dunegpschedd02.fnal.gov
Workflow ID4451
Stage ID1
User nameimawby@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes4194304000 (4000 MiB)
Wall seconds limit43200 (12 hours)
Submitted time2025-09-23 10:02:24
SiteUK_Manchester
EntryUBoone_T2_UK_Manchester_ce01
Last heartbeat2025-09-23 10:09:22
From worker nodeHostnamewn1905241.tier2.hep.manchester.ac.uk
cpuinfoAMD EPYC 7513 32-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit257400 (71 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-09-23 10:04:13
Input filesfardet-hd:nu_dune10kt_1x2x6_1100_707_20230826T035159Z_gen_g4_detsim_hitreco__20240229T194423Z_reco2.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-09-23 10:09:22
Saved logsjustin-logs:101240.182-dunegpschedd02.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

321e8bcba3fd0346bc10c6a598eed60a
MRB_SOURCE=/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/srcs
MRB_BUILDDIR=/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/build_slf7.x86_64
MRB_INSTALL=/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/localProducts_larsoft_v10_08_00_e26_prof

PRODUCTS=/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/localProducts_larsoft_v10_08_00_e26_prof:/cvmfs/dune.opensciencegrid.org/products/dune:/cvmfs/larsoft.opensciencegrid.org/products:/cvmfs/larsoft.opensciencegrid.org/packages:/cvmfs/fermilab.opensciencegrid.org/products/common/db/
CETPKG_INSTALL=/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/localProducts_larsoft_v10_08_00_e26_prof

local product directory is /cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/localProducts_larsoft_v10_08_00_e26_prof
----------- this block should be empty ------------------
---------------------------------------------------------
Input PFN = root://se1.farm.particle.cz:1094//dune/RSE/fardet-hd/c6/90/nu_dune10kt_1x2x6_1100_707_20230826T035159Z_gen_g4_detsim_hitreco__20240229T194423Z_reco2.root
../justin-jobscript: line 64:  1305 Segmentation fault      (core dumped) lar -c $FCL_FILE $events_option "$pfn" > ${fname}_reco_${now}.log 2>&1
lar exit code 139
=== Start last 100 lines of lar log file ===
  rns
  solarflash
  spsolve
  trajcluster
  trkshowersplit
  wclsmcnfsp
DuneDeconvolutionService::ctor: DuneDeconvolutionService:
DuneDeconvolutionService::ctor:                LogLevel: 1
DuneRoiBuildingService::ctor: DuneRoiBuildingService:
DuneRoiBuildingService::ctor:     LogLevel: 1
DuneRoiBuildingService::ctor:  NSigmaStart: 3
DuneRoiBuildingService::ctor:    NSigmaEnd: 1
DuneRoiBuildingService::ctor:       PadLow: 50
DuneRoiBuildingService::ctor:      PadHigh: 50
StandardAdcWireBuildingService::ctor: StandardAdcWireBuildingService:
StandardAdcWireBuildingService::ctor:     LogLevel: 1
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_08_00d00/gdml/dune10kt_v6_refactored_1x2x6.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Error: Unsupported GDML Tag Used :gdml_simple_extension. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :extension. Please Check Geometry/Schema.
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1149
Info in <TGeoManager::CloseGeometry>: 67545 nodes/ 5439 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
GeoApaChannelGroupService::ctor: Group 0 (apa00) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 1 (apa01) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 2 (apa02) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 3 (apa03) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 4 (apa04) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 5 (apa05) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 6 (apa06) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 7 (apa07) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 8 (apa08) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 9 (apa09) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 10 (apa10) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 11 (apa11) has 2560 channels from 4/4 readout planes.
DuneToolManager::fclFilename: Taking fcl name from command line: lar -c /cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/kalmanTraining.fcl -n 100 root://se1.farm.particle.cz:1094//dune/RSE/fardet-hd/c6/90/nu_dune10kt_1x2x6_1100_707_20230826T035159Z_gen_g4_detsim_hitreco__20240229T194423Z_reco2.root
AcdDigitReader::ctor:     LogLevel: 1
DuneToolManager::getPrivate: ERROR: Tool name is blank
StandardRawDigitExtractService::ctor: Retrieved digit read tool digitReader
StandardRawDigitExtractService::ctor: StandardRawDigitExtractService:
StandardRawDigitExtractService::ctor:         LogLevel: 1
StandardRawDigitExtractService::ctor:    DigitReadTool: digitReader
StandardRawDigitExtractService::ctor:   PedestalOption: 1
StandardRawDigitExtractService::ctor:     FlagStuckOff: 0
StandardRawDigitExtractService::ctor:      FlagStuckOn: 0
StandardRawDigitPrepService::ctor: Fetching extract service.
StandardRawDigitPrepService::ctor: Fetching channel status provider.
StandardRawDigitPrepService::ctor:   Channel status provider: @0xc4dc940
StandardRawDigitPrepService::ctor:   Extract service: @0xde46f30
StandardRawDigitPrepService::ctor: Fetching deconvolution service.
StandardRawDigitPrepService::ctor:   Deconvolution service: @0x4b9a3c0
StandardRawDigitPrepService::ctor: Fetching ROI building service.
StandardRawDigitPrepService::ctor:   ROI building service: @0xbf40b40
StandardRawDigitPrepService::ctor: Fetching wire building service.
StandardRawDigitPrepService::ctor:   Wire building service: @0x4aee370
StandardRawDigitPrepService::ctor: StandardRawDigitPrepService:
StandardRawDigitPrepService::ctor:              LogLevel: 1
StandardRawDigitPrepService::ctor:               SkipBad: 1
StandardRawDigitPrepService::ctor:             SkipNoisy: 0
StandardRawDigitPrepService::ctor:   ChannelStatusOnline: 0
StandardRawDigitPrepService::ctor:          DoMitigation: 0
StandardRawDigitPrepService::ctor:  DoEarlySignalFinding: 0
StandardRawDigitPrepService::ctor:        DoNoiseRemoval: 0
StandardRawDigitPrepService::ctor:       DoDeconvolution: 1
StandardRawDigitPrepService::ctor:  DoPedestalAdjustment: 0
StandardRawDigitPrepService::ctor:                 DoROI: 1
StandardRawDigitPrepService::ctor:               DoWires: 1
StandardRawDigitPrepService::ctor:                DoDump: 0
StandardRawDigitPrepService::ctor:  DoIntermediateStates: 0
StandardRawDigitPrepService::ctor: No display tools.
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
23-Sep-2025 11:05:04 BST  Initiating request to open input file "root://se1.farm.particle.cz:1094//dune/RSE/fardet-hd/c6/90/nu_dune10kt_1x2x6_1100_707_20230826T035159Z_gen_g4_detsim_hitreco__20240229T194423Z_reco2.root"
23-Sep-2025 11:05:06 BST  Opened input file "root://se1.farm.particle.cz:1094//dune/RSE/fardet-hd/c6/90/nu_dune10kt_1x2x6_1100_707_20230826T035159Z_gen_g4_detsim_hitreco__20240229T194423Z_reco2.root"
Begin processing the 1st record. run: 1100 subRun: 1 event: 70701 at 23-Sep-2025 11:05:08 BST
Loaded the TorchScript model '/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/PandoraNet_Vertex_DUNEFD_HD_Accel_1_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/PandoraNet_Vertex_DUNEFD_HD_Accel_1_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/PandoraNet_Vertex_DUNEFD_HD_Accel_1_W_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/PandoraNet_Vertex_DUNEFD_HD_Accel_2_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/PandoraNet_Vertex_DUNEFD_HD_Accel_2_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/PandoraNet_Vertex_DUNEFD_HD_Accel_2_W_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_U_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_V_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/01f51819321e8bcba3fd0346bc10c6a598eed60a/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_W_v04_13_00.pt'
PandoraMonitoring, only able to use default TApplication (limited functionality).
PandoraMonitoring::InitializeEve(): DISPLAY environment not set
PandoraMonitoring::InitializeEve(): Caught TEveException: TEveManager::Create ROOT is running in batch mode.
PandoraMonitoring::InitializeEve(): Attempt to release ROOT from batch mode.
Failure in algorithm Alg0053, LArVisualMonitoring, unknown exception
23-Sep-2025 11:05:14 BST  Opened output file with pattern "%ifb_reco2.root"
Begin processing the 2nd record. run: 1100 subRun: 1 event: 70702 at 23-Sep-2025 11:08:56 BST
PandoraMonitoring::InitializeEve(): DISPLAY environment not set
=== End last 100 lines of lar log file ===
mv: cannot stat 'CheatingKalmanSplittingU.root': No such file or directory
mv: cannot stat 'CheatingKalmanSplittingV.root': No such file or directory
mv: cannot stat 'CheatingKalmanSplittingW.root': No such file or directory
justIN time: 2025-11-04 18:22:58 UTC       justIN version: 01.05.01