Jobsub ID 18654.5@dunegpschedd01.fnal.gov
| Jobsub ID | 18654.5@dunegpschedd01.fnal.gov |
| Workflow ID | 99 |
| Stage ID | 1 |
| User name | szh2@fnal.gov |
| HTCondor Group | group_dune |
| Requested | Processors | 1 |
| GPU | No |
| RSS bytes | 2097152000 (2000 MiB) |
| Wall seconds limit | 80000 (22 hours) |
| Submitted time | 2025-07-28 18:36:24 |
| Site | NL_NIKHEF |
| Entry | VIRGO_NL_NIKHEF_juk |
| Last heartbeat | 2025-07-28 19:13:25 |
| From worker node | Hostname | wn-choc-026.farm.nikhef.nl |
| cpuinfo | Intel(R) Xeon(R) CPU E5-2650 v4 @ 2.20GHz |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 2097152000 (2000 MiB) |
| Wall seconds limit | 129600 (36 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | none_processed |
| Started | 2025-07-28 18:37:31 |
| Input files | |
| Outputting started | 2025-07-28 19:12:59 |
| Output files | |
| Finished | 2025-07-28 19:13:25 |
| List job events Cached HTCondor job logs |
Jobscript log (last 10,000 characters)
DFastSimExternal@Construction 28-Jul-2025 21:06:15 CEST ModuleConstruction
Photon propagation time model initalized.
%MSG
%MSG-i PDFastSimPVS: PDFastSimPVS:PDFastSimExternal@Construction 28-Jul-2025 21:06:15 CEST ModuleConstruction
Use Lite Photon.
%MSG
%MSG-i PDFastSimPVS: PDFastSimPVS:PDFastSimExternal@Construction 28-Jul-2025 21:06:15 CEST ModuleConstruction
PDFastSimPVS Initialization finish
%MSG
28-Jul-2025 21:06:15 CEST Initiating request to open input file "cosmic_g4_stage1_1.root"
%MSG-i Root_Information: TriggerResultInserter:TriggerResults@Construction TClass::Init() 28-Jul-2025 21:06:17 CEST ModuleConstruction
no dictionary for class sim::IDE is available
ROOT severity: 2000
%MSG
28-Jul-2025 21:06:17 CEST Opened input file "cosmic_g4_stage1_1.root"
IonAndScint beginJob.
Using Correlated algorithm to calculate IS.
%MSG-i ISCalcCorrelated: IonAndScint:IonAndScint@BeginJob 28-Jul-2025 21:06:18 CEST ModuleBeginJob ISCalcCorrelated.cxx:40
IonizationAndScintillation/ISCalcCorrelated Initialize.
%MSG
IonAndScint beginJob.
Using Correlated algorithm to calculate IS.
%MSG-i ISCalcCorrelated: IonAndScint:IonAndScintExternal@BeginJob 28-Jul-2025 21:06:18 CEST ModuleBeginJob ISCalcCorrelated.cxx:40
IonizationAndScintillation/ISCalcCorrelated Initialize.
%MSG
Begin processing the 1st record. run: 1 subRun: 0 event: 1 at 28-Jul-2025 21:06:18 CEST
%MSG-w PhotonBackTrackerService: ProcessEvent 28-Jul-2025 21:06:31 CEST run: 1 subRun: 0 event: 1
Rebuild failed to get the OpDetBTRs. This is expected when running on a generation or simulation step.
%MSG
%MSG-i NuRandomService: IonAndScint:IonAndScint@BeginModule 28-Jul-2025 21:06:31 CEST run: 1 subRun: 0 event: 1
Random seed for this event, engine 'IonAndScint.ISCalcAlg': 139954810
%MSG
IonAndScint Module Producer
Skip SimEnergyDeposit in: LArG4DetectorServicevolTPCActiveOuter
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveInner
%MSG-i NuRandomService: IonAndScint:IonAndScintExternal@BeginModule 28-Jul-2025 21:06:34 CEST run: 1 subRun: 0 event: 1
Random seed for this event, engine 'IonAndScintExternal.ISCalcAlg': 467928911
%MSG
IonAndScint Module Producer
Skip SimEnergyDeposit in: priorSCE
Skip SimEnergyDeposit in:
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveOuter
Skip SimEnergyDeposit in: LArG4DetectorServicevolTPCActiveInner
%MSG-i NuRandomService: PDFastSimPAR:PDFastSim@BeginModule 28-Jul-2025 21:06:34 CEST run: 1 subRun: 0 event: 1
Random seed for this event, engine 'PDFastSim.photon': 160043612
%MSG
%MSG-i NuRandomService: PDFastSimPAR:PDFastSim@BeginModule 28-Jul-2025 21:06:34 CEST run: 1 subRun: 0 event: 1
Random seed for this event, engine 'PDFastSim.scinttime': 714589049
%MSG
%MSG-i NuRandomService: PDFastSimPVS:PDFastSimExternal@BeginModule 28-Jul-2025 21:11:02 CEST run: 1 subRun: 0 event: 1
Random seed for this event, engine 'PDFastSimExternal.photon': 247303978
%MSG
%MSG-i NuRandomService: PDFastSimPVS:PDFastSimExternal@BeginModule 28-Jul-2025 21:11:02 CEST run: 1 subRun: 0 event: 1
Random seed for this event, engine 'PDFastSimExternal.scinttime': 5375463
%MSG
%MSG-i PhotonVisibilityService: PDFastSimPVS:PDFastSimExternal@BeginModule 28-Jul-2025 21:11:05 CEST run: 1 subRun: 0 event: 1
PhotonVisibilityService Loading photon library from file /cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/PhotonPropagation/LibraryData/Photon_library_protoDUNEhd_library_protoDUNEhd_v2_refactored_nonActive.root for 760182 voxels and 160 optical detectors.
%MSG
%MSG-i PhotonLibrary: PDFastSimPVS:PDFastSimExternal@BeginModule 28-Jul-2025 21:11:05 CEST run: 1 subRun: 0 event: 1
Reading photon library from input file: /cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/PhotonPropagation/LibraryData/Photon_library_protoDUNEhd_library_protoDUNEhd_v2_refactored_nonActive.root
%MSG
%MSG-i PhotonLibrary: PDFastSimPVS:PDFastSimExternal@BeginModule 28-Jul-2025 21:11:23 CEST run: 1 subRun: 0 event: 1
Photon lookup table size : 760182 voxels, 160 channels (no voxel geometry included)
%MSG
28-Jul-2025 21:11:24 CEST Opened output file with pattern "cosmic_g4_stage2_1.root"
%MSG-i FastCloning: PostProcessEvent 28-Jul-2025 21:11:24 CEST run: 1 subRun: 0 event: 1
Fast cloning event data products from input file.
%MSG
%MSG-e PassingThrough: PostProcessEvent 28-Jul-2025 21:11:44 CEST run: 1 subRun: 0 event: 1
an exception occurred during current event processing
%MSG
IonAndScint endJob.
IonAndScint endJob.
28-Jul-2025 21:11:44 CEST Closed input file "cosmic_g4_stage1_1.root"
================================================================================================================================
TimeTracker printout (sec) Min Avg Max Median RMS nEvts
================================================================================================================================
Full event 292.87 292.87 292.87 292.87 0 1
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read) 0.000718547 0.000718547 0.000718547 0.000718547 0 1
simulate:rns:RandomNumberSaver 0.000230994 0.000230994 0.000230994 0.000230994 0 1
simulate:IonAndScint:IonAndScint 3.63859 3.63859 3.63859 3.63859 0 1
simulate:IonAndScintExternal:IonAndScint 0.00265085 0.00265085 0.00265085 0.00265085 0 1
simulate:PDFastSim:PDFastSimPAR 267.533 267.533 267.533 267.533 0 1
simulate:PDFastSimExternal:PDFastSimPVS 21.6938 21.6938 21.6938 21.6938 0 1
[art]:TriggerResults:TriggerResultInserter 5.6927e-05 5.6927e-05 5.6927e-05 5.6927e-05 0 1
end_path:out1:RootOutput 1.5786e-05 1.5786e-05 1.5786e-05 1.5786e-05 0 1
================================================================================================================================
%MSG-i NuRandomService: RootOutput:out1@EndJob 28-Jul-2025 21:11:44 CEST ModuleEndJob
Summary of seeds computed by the NuRandomService
Random policy: 'perEvent'
algorithm version: EventTimestamp_v1
Configured value Last value ModuleLabel.InstanceName
(per event) 139954810 IonAndScint.ISCalcAlg
(per event) 467928911 IonAndScintExternal.ISCalcAlg
(per event) 160043612 PDFastSim.photon
(per event) 714589049 PDFastSim.scinttime
(per event) 247303978 PDFastSimExternal.photon
(per event) 5375463 PDFastSimExternal.scinttime
%MSG
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 8276.26 MB
Peak resident set size usage (VmHWM): 7410.54 MB
====================================================================================================
TrigReport ---------- Event summary -------------
TrigReport Events total = 1 passed = 1 failed = 0
TrigReport ---------- Modules in End-path ----------
TrigReport Run Success Error Name
TrigReport 1 1 0 out1
TimeReport ---------- Time summary [sec] -------
TimeReport CPU = 160.385969 Real = 326.025850
MemReport ---------- Memory summary [base-10 MB] ------
MemReport VmPeak = 8276.26 VmHWM = 7410.54
%MSG-s ArtException: PostEndJob 28-Jul-2025 21:12:40 CEST ModuleEndJob
std::bad_alloc---- FatalRootError BEGIN
Fatal Root Error: TTree::SetEntries
Tree branches have different numbers of entries, eg EventAuxiliary has 0 entries while sim::ParticleAncestryMap_largeant__G4Stage1. has 10 entries.
ROOT severity: 2000
---- FatalRootError END
%MSG
Art has completed and will exit with status 1.
G4 Stage 2 done and Stage 1 file removed
total 1.1G
drwxr-xr-x. 3 dune012 dune 4.0K Jul 28 20:37 ..
-rw-r--r--. 1 dune012 dune 28K Jul 28 20:40 time.db
-rw-r--r--. 1 dune012 dune 108K Jul 28 20:40 mem.db
-rw-r--r--. 1 dune012 dune 701K Jul 28 20:40 prod_cosmics_protodunehd_hist.root
-rw-r--r--. 1 dune012 dune 519 Jul 28 20:50 g4_protodunehd_stage1_hist.root
-rw-r--r--. 1 dune012 dune 1.1G Jul 28 21:12 RootOutput-1efc-5db1-5df6-32e5.root
-rw-r--r--. 1 dune012 dune 519 Jul 28 21:12 g4_protodunehd_hist.root
drwxr-xr-x. 2 dune012 dune 4.0K Jul 28 21:12 .
-rw-r--r--. 1 dune012 dune 235K Jul 28 21:12 jobscript.log
htgettoken: Failure getting token from https://htvaultprod.fnal.gov:8200
Mon Jul 28 21:12:42 2025
Notice: Unable to find valid grid or kerberos credentials. Later actions will likely fail.
gfal-copy error: 2 (No such file or directory) - Could not stat the source: errno reported by local system call No such file or directory
Perhaps you forgot a -D to indicate destination is a directory?
Mon Jul 28 21:12:44 2025
program: www_cp.sh /home/workspace/cosmic_g4_stage2_1.root https://fndcadoor.fnal.gov:2880/dune/scratch/users/szh2/MC_pdhd_Michel/MY_production//cosmic_g4_stage2_1.rootexited status 2
delaying 12 ...
htgettoken: Failure getting token from https://htvaultprod.fnal.gov:8200
Mon Jul 28 21:12:57 2025
Notice: Unable to find valid grid or kerberos credentials. Later actions will likely fail.
Mon Jul 28 21:12:57 2025
retrying...
gfal-copy error: 2 (No such file or directory) - Could not stat the source: errno reported by local system call No such file or directory
Perhaps you forgot a -D to indicate destination is a directory?
Final G4 file copied and cleaned up 