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Jobsub ID 20206.3@dunegpschedd01.fnal.gov

Jobsub ID20206.3@dunegpschedd01.fnal.gov
Workflow ID221
Stage ID1
User nameichong@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes4194304000 (4000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-08-01 14:00:08
SiteNL_NIKHEF
EntryVIRGO_NL_NIKHEF_dissel
Last heartbeat2025-08-01 14:04:02
From worker nodeHostnamewn-pep-007.farm.nikhef.nl
cpuinfoIntel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit129600 (36 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-08-01 14:01:39
Input filesfardet-hd:atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50546594_826_20231202T082119Z_gen_g4_detsim_hitreco__20240507T195656Z_reco2.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-08-01 14:04:02
Saved logsjustin-logs:20206.3-dunegpschedd01.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

record. run: 50546594 subRun: 1 event: 82696 at 01-Aug-2025 16:03:41 CEST
Analysing.

Warning: there was no track found for track-like PFParticle with ID 1
Begin processing the 97th record. run: 50546594 subRun: 1 event: 82697 at 01-Aug-2025 16:03:41 CEST
Analysing.

Warning: there was no track found for track-like PFParticle with ID 1
Begin processing the 98th record. run: 50546594 subRun: 1 event: 82698 at 01-Aug-2025 16:03:41 CEST
Analysing.

Warning: there was no track found for track-like PFParticle with ID 2
Begin processing the 99th record. run: 50546594 subRun: 1 event: 82699 at 01-Aug-2025 16:03:41 CEST
Analysing.

Warning: there was no track found for track-like PFParticle with ID 1
Begin processing the 100th record. run: 50546594 subRun: 1 event: 82700 at 01-Aug-2025 16:03:41 CEST
Analysing.

Warning: there was no track found for track-like PFParticle with ID 2
01-Aug-2025 16:03:41 CEST  Closed input file "root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/fardet-hd/61/a3/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50546594_826_20231202T082119Z_gen_g4_detsim_hitreco__20240507T195656Z_reco2.root"

========================================================================================================================
TimeTracker printout (sec)                Min           Avg           Max         Median          RMS         nEvts   
========================================================================================================================
Full event                            0.00859735     0.0429695     0.368345      0.0183702     0.0702572       100    
------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                0.000459818   0.000730103   0.00136735    0.000711012   0.000179154      100    
end_path:analysistree:AnalysisTree    0.00803315     0.0421303     0.367207      0.0176159     0.0702178       100    
========================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 7328.25 MB
  Peak resident set size usage (VmHWM): 975.323 MB
====================================================================================================
Art has completed and will exit with status 0.
=== End last 100 lines of third lar log file ===
=== Start last 100 lines of lar log file ===
* Association Name:  ShowerTrackAssn          * Instance Name:  * Type: art::Assns<recob::Shower, recob::Track, void>*              *
* Association Name:  ShowerTrackHitAssn       * Instance Name:  * Type: art::Assns<recob::Track, recob::Hit, void>*                 *
* Association Name:  clusterAssociationsbase  * Instance Name:  * Type: art::Assns<recob::Shower, recob::Cluster, void>*            *
* Association Name:  hitAssociationsbase      * Instance Name:  * Type: art::Assns<recob::Shower, recob::Hit, void>*                *
* Association Name:  pfShowerAssociationsbase * Instance Name:  * Type: art::Assns<recob::Shower, recob::PFParticle, void>*         *
* Association Name:  spShowerAssociationsbase * Instance Name:  * Type: art::Assns<recob::Shower, recob::SpacePoint, void>*         *
*************************************************************************************************************************************
01-Aug-2025 16:02:43 CEST  Initiating request to open input file "root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/fardet-hd/61/a3/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50546594_826_20231202T082119Z_gen_g4_detsim_hitreco__20240507T195656Z_reco2.root"
01-Aug-2025 16:02:45 CEST  Opened input file "root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/fardet-hd/61/a3/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50546594_826_20231202T082119Z_gen_g4_detsim_hitreco__20240507T195656Z_reco2.root"
Begin processing the 1st record. run: 50546594 subRun: 1 event: 82601 at 01-Aug-2025 16:02:46 CEST
0 X, 0 U, 0 V bad channels
Finding XUV coincidences...
C:0 T:3 59 XUs and 111 XVs -> 20 XUVs
20 XUVs total
14 collection wire objects
20 potential space points
Neighbour search...
248 tests to find 110 neighbours
Iterating with no regularization...
Begin: 1.59896e+07
0 1.57436e+07
1 1.57431e+07
Now with regularization...
Begin: 1.55531e+07
0 1.55531e+07
---MC-PARTICLE-MONITORING-----------------------------------------------------------------------

BeamNeutrinos: 

--Primary 0, MCPDG 11, Energy 0.680623, Dist. 13.961, nMCHits 48 (15, 19, 14)
MCPDG 11, Energy 0.680623, Dist. 13.961, nMCHits 48 (15, 19, 14)

--Primary 1, MCPDG 2212, Energy 1.06883, Dist. 12.3299, nMCHits 45 (5, 24, 16)
MCPDG 2212, Energy 1.06883, Dist. 12.3299, nMCHits 45 (5, 24, 16)
------------------------------------------------------------------------------------------------
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Atmos_1_U_v04_03_00.pt'
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Atmos_1_V_v04_03_00.pt'
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Atmos_1_W_v04_03_00.pt'
Operating in training mode.
The eid is 0
Graph saved to training1_CaloHitListW_graph.data
Size of file training1_CaloHitListW_graph.data is 828 bytes.
The eid is 0
Graph saved to training1_CaloHitListU_graph.data
Size of file training1_CaloHitListU_graph.data is 596 bytes.
The eid is 0
Graph saved to training1_CaloHitListV_graph.data
Size of file training1_CaloHitListV_graph.data is 1092 bytes.
Operating in inference mode.
Operating in training mode.
The eid is -1
Graph saved to training2_CaloHitListW_graph.data
Size of file training2_CaloHitListW_graph.data is 828 bytes.
The eid is -1
Graph saved to training2_CaloHitListU_graph.data
Size of file training2_CaloHitListU_graph.data is 596 bytes.
The eid is -1
Graph saved to training2_CaloHitListV_graph.data
Size of file training2_CaloHitListV_graph.data is 1092 bytes.
Boundary wire vector sizes: 23, 45, 34
minwire 0: 564
minwire 1: 2942
minwire 2: 0
Used alternate method to get min and max wires due to vertex determination failure: 0, 499
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 499
Used alternate method to get min and max wires due to vertex determination failure: 2379, 2878
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 499
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 499
01-Aug-2025 16:02:49 CEST  Opened output file with pattern "atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50546594_826_20231202T082119Z_gen_g4_detsim_hitreco__20240507T195656Z_reco2_graph_2025-08-01T_140147Z.root"
01-Aug-2025 16:02:56 CEST  Closed input file "root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/fardet-hd/61/a3/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50546594_826_20231202T082119Z_gen_g4_detsim_hitreco__20240507T195656Z_reco2.root"
Malformed TimeTracker database.  The TimeEvent table is empty, but
the TimeModule table is not.  This can happen if an exception has
been thrown from a module while processing the first event.  Any
saved database file is suspect and should not be used.

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 8588.67 MB
  Peak resident set size usage (VmHWM): 1671.1 MB
====================================================================================================
%MSG-s ArtException:  PostEndJob 01-Aug-2025 16:02:57 CEST ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- ScheduleExecutionFailure BEGIN
    Path: ProcessingStopped.
    ---- BadAlloc BEGIN
      A bad_alloc exception was thrown while processing module CVNEvaluator/cvneva run: 50546594 subRun: 1 event: 82601
      The job has probably exhausted the virtual memory available to the process.
    ---- BadAlloc END
    Exception going through path reco
  ---- ScheduleExecutionFailure END
---- EventProcessorFailure END
---- FatalRootError BEGIN
  Fatal Root Error: TTree::SetEntries
  Tree branches have different numbers of entries, eg EventAuxiliary has 0 entries while recob::PCAxisrecob::Showervoidart::Assns_pandoraShower__Reco2. has 100 entries.
  ROOT severity: 2000
---- FatalRootError END
%MSG
Art has completed and will exit with status 1.
=== End last 100 lines of lar log file ===
=== Generated output files ===
20206.3_dunegpschedd01.fnal.gov.logs.tgz
RootOutput-0dd8-fc7d-86e2-48e4.root
ana_tree_hd.root
analysiseid.root
atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50546594_826_20231202T082119Z_gen_g4_detsim_hitreco__20240507T195656Z_reco2_graph_2025-08-01T_140147Z.log
debugprod.log
jobscript.log
reco_hist.root
secondary_atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50546594_826_20231202T082119Z_gen_g4_detsim_hitreco__20240507T195656Z_reco2_graph_2025-08-01T_140147Z.log
third_atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50546594_826_20231202T082119Z_gen_g4_detsim_hitreco__20240507T195656Z_reco2_graph_2025-08-01T_140147Z.log
training1_CaloHitListU.csv
training1_CaloHitListU_graph.data
training1_CaloHitListV.csv
training1_CaloHitListV_graph.data
training1_CaloHitListW.csv
training1_CaloHitListW_graph.data
training2_CaloHitListU.csv
training2_CaloHitListU_graph.data
training2_CaloHitListV.csv
training2_CaloHitListV_graph.data
training2_CaloHitListW.csv
training2_CaloHitListW_graph.data
justIN time: 2025-08-04 14:16:42 UTC       justIN version: 01.04.00