justIN           Dashboard       Workflows       Jobs       AWT       Sites       Storages       Docs       Login

Jobsub ID 20675.15@dunegpschedd01.fnal.gov

Jobsub ID20675.15@dunegpschedd01.fnal.gov
Workflow ID270
Stage ID1
User nameichong@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes4194304000 (4000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-08-03 17:28:47
SiteNL_NIKHEF
EntryVIRGO_NL_NIKHEF_juk
Last heartbeat2025-08-03 17:33:35
From worker nodeHostnamewn-pep-013.farm.nikhef.nl
cpuinfoIntel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit129600 (36 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-08-03 17:29:27
Input filesfardet-hd:atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50573344_655_20231203T083026Z_gen_g4_detsim_hitreco__20240508T035125Z_reco2.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-08-03 17:33:35
Saved logsjustin-logs:20675.15-dunegpschedd01.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

arning: there were 11 reconstructed PFParticle daughters; only the first 10 being stored in tree
Warning: there was no track found for track-like PFParticle with ID 11
Begin processing the 98th record. run: 50573344 subRun: 1 event: 65598 at 03-Aug-2025 19:33:18 CEST
Analysing.

Warning: there was no vertex found for PFParticle with ID 2
Warning: there was no track found for track-like PFParticle with ID 2
Warning: there was no track found for track-like PFParticle with ID 3
Begin processing the 99th record. run: 50573344 subRun: 1 event: 65599 at 03-Aug-2025 19:33:18 CEST
Analysing.

Warning: there was no track found for track-like PFParticle with ID 3
Begin processing the 100th record. run: 50573344 subRun: 1 event: 65600 at 03-Aug-2025 19:33:18 CEST
Analysing.

03-Aug-2025 19:33:18 CEST  Closed input file "root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/fardet-hd/cd/d4/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50573344_655_20231203T083026Z_gen_g4_detsim_hitreco__20240508T035125Z_reco2.root"

========================================================================================================================
TimeTracker printout (sec)                Min           Avg           Max         Median          RMS         nEvts   
========================================================================================================================
Full event                             0.0103304     0.0380118     0.438448      0.0219558     0.0586768       100    
------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                0.000486774   0.000903488   0.00152605    0.000893136   0.000197523      100    
end_path:analysistree:AnalysisTree    0.00937901     0.0369895     0.437607      0.0208826     0.0586572       100    
========================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 7315.17 MB
  Peak resident set size usage (VmHWM): 961.262 MB
====================================================================================================
Art has completed and will exit with status 0.
=== End last 100 lines of third lar log file ===
=== Start last 100 lines of lar log file ===
* Association Name:  PFParticlePCAxisAssn     * Instance Name:  * Type: art::Assns<recob::PFParticle, recob::PCAxis, void>*         *
* Association Name:  ShowerPCAxisAssn         * Instance Name:  * Type: art::Assns<recob::Shower, recob::PCAxis, void>*             *
* Association Name:  ShowerTrackAssn          * Instance Name:  * Type: art::Assns<recob::Shower, recob::Track, void>*              *
* Association Name:  ShowerTrackHitAssn       * Instance Name:  * Type: art::Assns<recob::Track, recob::Hit, void>*                 *
* Association Name:  clusterAssociationsbase  * Instance Name:  * Type: art::Assns<recob::Shower, recob::Cluster, void>*            *
* Association Name:  hitAssociationsbase      * Instance Name:  * Type: art::Assns<recob::Shower, recob::Hit, void>*                *
* Association Name:  pfShowerAssociationsbase * Instance Name:  * Type: art::Assns<recob::Shower, recob::PFParticle, void>*         *
* Association Name:  spShowerAssociationsbase * Instance Name:  * Type: art::Assns<recob::Shower, recob::SpacePoint, void>*         *
*************************************************************************************************************************************
03-Aug-2025 19:30:08 CEST  Initiating request to open input file "root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/fardet-hd/cd/d4/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50573344_655_20231203T083026Z_gen_g4_detsim_hitreco__20240508T035125Z_reco2.root"
03-Aug-2025 19:30:55 CEST  Opened input file "root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/fardet-hd/cd/d4/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50573344_655_20231203T083026Z_gen_g4_detsim_hitreco__20240508T035125Z_reco2.root"
Begin processing the 1st record. run: 50573344 subRun: 1 event: 65501 at 03-Aug-2025 19:30:56 CEST
0 X, 0 U, 0 V bad channels
Finding XUV coincidences...
C:0 T:0 159 XUs and 216 XVs -> 72 XUVs
C:0 T:4 49 XUs and 81 XVs -> 30 XUVs
102 XUVs total
61 collection wire objects
102 potential space points
Neighbour search...
2086 tests to find 1120 neighbours
Iterating with no regularization...
Begin: 7.93743e+06
0 6.43404e+06
1 6.39038e+06
2 6.38908e+06
Now with regularization...
Begin: 5.58846e+06
0 5.588e+06
---MC-PARTICLE-MONITORING-----------------------------------------------------------------------

BeamNeutrinos: 

--Primary 0, MCPDG 11, Energy 0.266608, Dist. 36.2646, nMCHits 318 (137, 80, 101)
MCPDG 11, Energy 0.266608, Dist. 36.2646, nMCHits 318 (137, 80, 101)
------------------------------------------------------------------------------------------------
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Atmos_1_U_v04_03_00.pt'
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Atmos_1_V_v04_03_00.pt'
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Atmos_1_W_v04_03_00.pt'
Operating in training mode.
The eid is 0
Graph saved to training1_CaloHitListW_graph.data
Size of file training1_CaloHitListW_graph.data is 2532 bytes.
The eid is 0
Graph saved to training1_CaloHitListU_graph.data
Size of file training1_CaloHitListU_graph.data is 3396 bytes.
The eid is 0
Graph saved to training1_CaloHitListV_graph.data
Size of file training1_CaloHitListV_graph.data is 2044 bytes.
Operating in inference mode.
Operating in training mode.
The eid is -1
Graph saved to training2_CaloHitListW_graph.data
Size of file training2_CaloHitListW_graph.data is 2532 bytes.
The eid is -1
Graph saved to training2_CaloHitListU_graph.data
Size of file training2_CaloHitListU_graph.data is 3396 bytes.
The eid is -1
Graph saved to training2_CaloHitListV_graph.data
Size of file training2_CaloHitListV_graph.data is 2044 bytes.
Boundary wire vector sizes: 82, 139, 103
minwire 0: 889
minwire 1: 2411
minwire 2: 409
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 499
Used alternate method to get min and max wires due to vertex determination failure: 2379, 2878
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 499
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 499
03-Aug-2025 19:30:59 CEST  Opened output file with pattern "atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50573344_655_20231203T083026Z_gen_g4_detsim_hitreco__20240508T035125Z_reco2_graph_2025-08-03T_172932Z.root"
03-Aug-2025 19:31:05 CEST  Closed input file "root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/fardet-hd/cd/d4/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50573344_655_20231203T083026Z_gen_g4_detsim_hitreco__20240508T035125Z_reco2.root"
Malformed TimeTracker database.  The TimeEvent table is empty, but
the TimeModule table is not.  This can happen if an exception has
been thrown from a module while processing the first event.  Any
saved database file is suspect and should not be used.

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 8587.67 MB
  Peak resident set size usage (VmHWM): 1685.98 MB
====================================================================================================
%MSG-s ArtException:  PostEndJob 03-Aug-2025 19:31:06 CEST ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- ScheduleExecutionFailure BEGIN
    Path: ProcessingStopped.
    ---- BadAlloc BEGIN
      A bad_alloc exception was thrown while processing module CVNEvaluator/cvneva run: 50573344 subRun: 1 event: 65501
      The job has probably exhausted the virtual memory available to the process.
    ---- BadAlloc END
    Exception going through path reco
  ---- ScheduleExecutionFailure END
---- EventProcessorFailure END
---- FatalRootError BEGIN
  Fatal Root Error: TTree::SetEntries
  Tree branches have different numbers of entries, eg EventAuxiliary has 0 entries while recob::PCAxisrecob::Showervoidart::Assns_pandoraShower__Reco2. has 100 entries.
  ROOT severity: 2000
---- FatalRootError END
%MSG
Art has completed and will exit with status 1.
=== End last 100 lines of lar log file ===
=== Generated output files ===
20675.15_dunegpschedd01.fnal.gov.logs.tgz
RootOutput-a443-27a4-4510-ec79.root
ana_tree_hd.root
analysiseid.root
atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50573344_655_20231203T083026Z_gen_g4_detsim_hitreco__20240508T035125Z_reco2_graph_2025-08-03T_172932Z.log
debugprod.log
jobscript.log
reco_hist.root
secondary_atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50573344_655_20231203T083026Z_gen_g4_detsim_hitreco__20240508T035125Z_reco2_graph_2025-08-03T_172932Z.log
third_atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50573344_655_20231203T083026Z_gen_g4_detsim_hitreco__20240508T035125Z_reco2_graph_2025-08-03T_172932Z.log
training1_CaloHitListU.csv
training1_CaloHitListU_graph.data
training1_CaloHitListV.csv
training1_CaloHitListV_graph.data
training1_CaloHitListW.csv
training1_CaloHitListW_graph.data
training2_CaloHitListU.csv
training2_CaloHitListU_graph.data
training2_CaloHitListV.csv
training2_CaloHitListV_graph.data
training2_CaloHitListW.csv
training2_CaloHitListW_graph.data
justIN time: 2025-08-04 14:22:01 UTC       justIN version: 01.04.00