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Jobsub ID 20678.1@dunegpschedd01.fnal.gov

Jobsub ID20678.1@dunegpschedd01.fnal.gov
Workflow ID270
Stage ID1
User nameichong@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes4194304000 (4000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-08-03 17:38:48
SiteNL_NIKHEF
EntryVIRGO_NL_NIKHEF_juk
Last heartbeat2025-08-03 17:41:21
From worker nodeHostnamewn-pep-013.farm.nikhef.nl
cpuinfoIntel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit129600 (36 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-08-03 17:39:30
Input filesfardet-hd:atmnu_max_weighted_randompolicy_dune10kt_1x2x6_74577407_63_20231208T053307Z_gen_g4_detsim_hitreco__20240510T055611Z_reco2.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-08-03 17:41:21
Saved logsjustin-logs:20678.1-dunegpschedd01.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

rack-like PFParticle with ID 4
Begin processing the 94th record. run: 74577407 subRun: 1 event: 6394 at 03-Aug-2025 19:41:03 CEST
Analysing.

Warning: there was no vertex found for PFParticle with ID 2
Warning: there was no track found for track-like PFParticle with ID 2
Warning: there was no track found for track-like PFParticle with ID 3
Begin processing the 95th record. run: 74577407 subRun: 1 event: 6395 at 03-Aug-2025 19:41:03 CEST
Analysing.

Warning: there was no track found for track-like PFParticle with ID 5
Begin processing the 96th record. run: 74577407 subRun: 1 event: 6396 at 03-Aug-2025 19:41:03 CEST
Analysing.

Begin processing the 97th record. run: 74577407 subRun: 1 event: 6397 at 03-Aug-2025 19:41:03 CEST
Analysing.

Begin processing the 98th record. run: 74577407 subRun: 1 event: 6398 at 03-Aug-2025 19:41:03 CEST
Analysing.

Warning: there was no track found for track-like PFParticle with ID 2
Begin processing the 99th record. run: 74577407 subRun: 1 event: 6399 at 03-Aug-2025 19:41:03 CEST
Analysing.

Warning: there was no track found for track-like PFParticle with ID 1
Begin processing the 100th record. run: 74577407 subRun: 1 event: 6400 at 03-Aug-2025 19:41:03 CEST
Analysing.

Warning: there was no vertex found for PFParticle with ID 0
Warning: there was no track found for track-like PFParticle with ID 0
Warning: there was no track found for track-like PFParticle with ID 1
03-Aug-2025 19:41:03 CEST  Closed input file "root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/fardet-hd/ae/cc/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_74577407_63_20231208T053307Z_gen_g4_detsim_hitreco__20240510T055611Z_reco2.root"

========================================================================================================================
TimeTracker printout (sec)                Min           Avg           Max         Median          RMS         nEvts   
========================================================================================================================
Full event                            0.00803368     0.0369825     0.310409      0.0174308     0.0552546       100    
------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                0.000414432   0.000670423   0.00121034    0.000666244   0.000173468      100    
end_path:analysistree:AnalysisTree    0.00745631     0.036194      0.309685      0.0166201     0.0552435       100    
========================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 7285.51 MB
  Peak resident set size usage (VmHWM): 931.443 MB
====================================================================================================
Art has completed and will exit with status 0.
=== End last 100 lines of third lar log file ===
=== Start last 100 lines of lar log file ===
* Association Name:  spShowerAssociationsbase * Instance Name:  * Type: art::Assns<recob::Shower, recob::SpacePoint, void>*         *
*************************************************************************************************************************************
03-Aug-2025 19:40:10 CEST  Initiating request to open input file "root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/fardet-hd/ae/cc/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_74577407_63_20231208T053307Z_gen_g4_detsim_hitreco__20240510T055611Z_reco2.root"
03-Aug-2025 19:40:13 CEST  Opened input file "root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/fardet-hd/ae/cc/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_74577407_63_20231208T053307Z_gen_g4_detsim_hitreco__20240510T055611Z_reco2.root"
Begin processing the 1st record. run: 74577407 subRun: 1 event: 6301 at 03-Aug-2025 19:40:13 CEST
0 X, 0 U, 0 V bad channels
Finding XUV coincidences...
C:0 T:7 388 XUs and 292 XVs -> 110 XUVs
C:0 T:11 255 XUs and 276 XVs -> 119 XUVs
229 XUVs total
114 collection wire objects
229 potential space points
Neighbour search...
9055 tests to find 5046 neighbours
Iterating with no regularization...
Begin: 2.65073e+07
0 2.36656e+07
1 2.35447e+07
2 2.35137e+07
3 2.3501e+07
Now with regularization...
Begin: 2.00912e+07
0 2.00805e+07
---MC-PARTICLE-MONITORING-----------------------------------------------------------------------

BeamNeutrinos: 

--Primary 0, MCPDG 22, Energy 0.240107, Dist. 47.9344, nMCHits 233 (79, 97, 57)
MCPDG 22, Energy 0.240107, Dist. 47.9344, nMCHits 233 (79, 97, 57)

--Primary 1, MCPDG 11, Energy 0.141757, Dist. 24.6394, nMCHits 228 (92, 61, 75)
MCPDG 11, Energy 0.141757, Dist. 24.6394, nMCHits 228 (92, 61, 75)

--Primary 2, MCPDG 22, Energy 0.0588336, Dist. 9.64945, nMCHits 77 (29, 28, 20)
MCPDG 22, Energy 0.0588336, Dist. 9.64945, nMCHits 77 (29, 28, 20)
------------------------------------------------------------------------------------------------
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Atmos_1_U_v04_03_00.pt'
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Atmos_1_V_v04_03_00.pt'
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Atmos_1_W_v04_03_00.pt'
Operating in training mode.
The eid is 0
Graph saved to training1_CaloHitListW_graph.data
Size of file training1_CaloHitListW_graph.data is 3892 bytes.
The eid is 0
Graph saved to training1_CaloHitListU_graph.data
Size of file training1_CaloHitListU_graph.data is 5212 bytes.
The eid is 0
Graph saved to training1_CaloHitListV_graph.data
Size of file training1_CaloHitListV_graph.data is 4852 bytes.
Operating in inference mode.
Operating in training mode.
The eid is -1
Graph saved to training2_CaloHitListW_graph.data
Size of file training2_CaloHitListW_graph.data is 3892 bytes.
The eid is -1
Graph saved to training2_CaloHitListU_graph.data
Size of file training2_CaloHitListU_graph.data is 5212 bytes.
The eid is -1
Graph saved to training2_CaloHitListV_graph.data
Size of file training2_CaloHitListV_graph.data is 4852 bytes.
Boundary wire vector sizes: 211, 198, 158
minwire 0: 834
minwire 1: 1604
minwire 2: 825
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 499
Used alternate method to get min and max wires due to vertex determination failure: 2379, 2878
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 499
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 499
03-Aug-2025 19:40:16 CEST  Opened output file with pattern "atmnu_max_weighted_randompolicy_dune10kt_1x2x6_74577407_63_20231208T053307Z_gen_g4_detsim_hitreco__20240510T055611Z_reco2_graph_2025-08-03T_173934Z.root"
03-Aug-2025 19:40:21 CEST  Closed input file "root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/fardet-hd/ae/cc/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_74577407_63_20231208T053307Z_gen_g4_detsim_hitreco__20240510T055611Z_reco2.root"
Malformed TimeTracker database.  The TimeEvent table is empty, but
the TimeModule table is not.  This can happen if an exception has
been thrown from a module while processing the first event.  Any
saved database file is suspect and should not be used.

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 8587.58 MB
  Peak resident set size usage (VmHWM): 1686.1 MB
====================================================================================================
%MSG-s ArtException:  PostEndJob 03-Aug-2025 19:40:22 CEST ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- ScheduleExecutionFailure BEGIN
    Path: ProcessingStopped.
    ---- BadAlloc BEGIN
      A bad_alloc exception was thrown while processing module CVNEvaluator/cvneva run: 74577407 subRun: 1 event: 6301
      The job has probably exhausted the virtual memory available to the process.
    ---- BadAlloc END
    Exception going through path reco
  ---- ScheduleExecutionFailure END
---- EventProcessorFailure END
---- FatalRootError BEGIN
  Fatal Root Error: TTree::SetEntries
  Tree branches have different numbers of entries, eg EventAuxiliary has 0 entries while recob::PCAxisrecob::Showervoidart::Assns_pandoraShower__Reco2. has 100 entries.
  ROOT severity: 2000
---- FatalRootError END
%MSG
Art has completed and will exit with status 1.
=== End last 100 lines of lar log file ===
=== Generated output files ===
20678.1_dunegpschedd01.fnal.gov.logs.tgz
RootOutput-d159-4a2a-c28d-60cc.root
ana_tree_hd.root
analysiseid.root
atmnu_max_weighted_randompolicy_dune10kt_1x2x6_74577407_63_20231208T053307Z_gen_g4_detsim_hitreco__20240510T055611Z_reco2_graph_2025-08-03T_173934Z.log
debugprod.log
jobscript.log
reco_hist.root
secondary_atmnu_max_weighted_randompolicy_dune10kt_1x2x6_74577407_63_20231208T053307Z_gen_g4_detsim_hitreco__20240510T055611Z_reco2_graph_2025-08-03T_173934Z.log
third_atmnu_max_weighted_randompolicy_dune10kt_1x2x6_74577407_63_20231208T053307Z_gen_g4_detsim_hitreco__20240510T055611Z_reco2_graph_2025-08-03T_173934Z.log
training1_CaloHitListU.csv
training1_CaloHitListU_graph.data
training1_CaloHitListV.csv
training1_CaloHitListV_graph.data
training1_CaloHitListW.csv
training1_CaloHitListW_graph.data
training2_CaloHitListU.csv
training2_CaloHitListU_graph.data
training2_CaloHitListV.csv
training2_CaloHitListV_graph.data
training2_CaloHitListW.csv
training2_CaloHitListW_graph.data
justIN time: 2025-08-04 16:06:05 UTC       justIN version: 01.04.00