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Jobsub ID 226231.7@dunegpschedd02.fnal.gov

Jobsub ID226231.7@dunegpschedd02.fnal.gov
Workflow ID8696
Stage ID1
User namehiguera@fnal.gov
HTCondor Groupgroup_dune.prod_mcsim
RequestedProcessors1
GPUNo
RSS bytes6291456000 (6000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-10-08 16:52:44
SiteUK_Glasgow
EntryCLAS12_T3_UK_ScotGrid_GLA_ce04_scitok
Last heartbeat2025-10-08 20:31:34
From worker nodeHostnamewn-h17-039.beowulf.cluster
cpuinfoIntel(R) Xeon(R) CPU E5-2630 v4 @ 2.20GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes7864320000 (7500 MiB)
Wall seconds limit171000 (47 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-10-08 18:55:50
Input filesmonte-carlo-008696-002472
JobscriptExit code66
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-10-08 20:31:34
Saved logsjustin-logs:226231.7-dunegpschedd02.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

sgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 1 ...
Wed Oct  8 19:56:59 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.0884063 s, 285 MB/s
Wed Oct  8 19:56:59 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 52 ...
Wed Oct  8 19:57:51 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.337548 s, 74.6 MB/s
Wed Oct  8 19:57:51 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 93 ...
Wed Oct  8 19:59:24 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.334645 s, 75.2 MB/s
Wed Oct  8 19:59:25 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 116 ...
Wed Oct  8 20:01:21 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.627296 s, 40.1 MB/s
Wed Oct  8 20:05:19 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 338 ...
Wed Oct  8 20:10:57 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.319446 s, 78.8 MB/s
Wed Oct  8 20:10:58 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 336 ...
Wed Oct  8 20:16:34 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.471426 s, 53.4 MB/s
Wed Oct  8 20:16:34 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 1596 ...
Wed Oct  8 20:43:10 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.579768 s, 43.4 MB/s
Wed Oct  8 20:43:11 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 2479 ...
Wed Oct  8 21:24:30 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.624541 s, 40.3 MB/s

Error in processing gen
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_05_00d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25610 nodes/ 5537 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.557082 s, 45.2 MB/s
Wed Oct  8 19:56:58 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 1 ...
Wed Oct  8 19:56:59 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.0884063 s, 285 MB/s
Wed Oct  8 19:56:59 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 52 ...
Wed Oct  8 19:57:51 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.337548 s, 74.6 MB/s
Wed Oct  8 19:57:51 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 93 ...
Wed Oct  8 19:59:24 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.334645 s, 75.2 MB/s
Wed Oct  8 19:59:25 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 116 ...
Wed Oct  8 20:01:21 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.627296 s, 40.1 MB/s
Wed Oct  8 20:05:19 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 338 ...
Wed Oct  8 20:10:57 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.319446 s, 78.8 MB/s
Wed Oct  8 20:10:58 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 336 ...
Wed Oct  8 20:16:34 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.471426 s, 53.4 MB/s
Wed Oct  8 20:16:34 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 1596 ...
Wed Oct  8 20:43:10 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.579768 s, 43.4 MB/s
Wed Oct  8 20:43:11 2025
 program: dd bs=512k  if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db of=/var/tmp/ifdh_7010_0/p_showers_210061.dbexited status 1
delaying 2479 ...
Wed Oct  8 21:24:30 2025
 retrying...
dd: error reading '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/p_showers_210061.db': Input/output error
48+0 records in
48+0 records out
25165824 bytes (25 MB) copied, 0.624541 s, 40.3 MB/s

Error running. Exiting with 66
justIN time: 2025-11-05 04:51:35 UTC       justIN version: 01.05.01