justIN           Dashboard       Workflows       Jobs       AWT       Sites       Storages       Docs       Login

Jobsub ID 235700.1@dunegpschedd02.fnal.gov

Jobsub ID235700.1@dunegpschedd02.fnal.gov
Workflow ID9405
Stage ID1
User nameykermaid@fnal.gov
HTCondor Groupgroup_dune.prod_mcsim
RequestedProcessors1
GPUNo
RSS bytes4193255424 (3999 MiB)
Wall seconds limit18000 (5 hours)
Submitted time2025-10-31 09:18:47
SiteNL_NIKHEF
EntryVIRGO_NL_NIKHEF_klomp
Last heartbeat2025-10-31 10:38:19
From worker nodeHostnamewn-pep-012.farm.nikhef.nl
cpuinfoIntel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit129600 (36 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-10-31 09:19:35
Input filesvd-protodune:np02vd_raw_run040270_0780_df-s03-d1_dw_0_20251028T103337.hdf5
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-10-31 10:38:19
Saved logsjustin-logs:235700.1-dunegpschedd02.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

ChannelSelector:chsel7> input frame: ident=144345 time=49 tick=512 with 12288 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=144345 time=49 tick=512 with 1536 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] 
[11:36:02.171] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=24 input frame: frame: ident=144345 time=49 tick=512 with 1536 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] 
[11:36:02.171] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=24 init nticks=8640 tbinmin=0 tbinmax=8640 
[11:36:02.212] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=24 load plane index: 0, ntraces=1536, input bad regions: 0 
[11:36:04.252] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=24 load plane index: 1, ntraces=1536, input bad regions: 0 
[11:36:06.324] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=24 load plane index: 2, ntraces=1536, input bad regions: 0 
[11:36:15.360] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=24 save plane index: 0, Qtot=703573601 Qloss=-73696857, 10578 indices spanning [47903,58480] "wiener" 
[11:36:15.590] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=24 save plane index: 0, Qtot=669030269 Qloss=-59440788, 7905 indices spanning [58481,66385] "gauss" 
[11:36:16.169] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=24 save plane index: 1, Qtot=399106212 Qloss=-41243287, 8732 indices spanning [66386,75117] "wiener" 
[11:36:16.375] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=24 save plane index: 1, Qtot=342636233 Qloss=-30325620, 6563 indices spanning [75118,81680] "gauss" 
[11:36:16.834] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=24 save plane index: 2, Qtot=318342752 Qloss=-27709193, 9391 indices spanning [81681,91071] "wiener" 
[11:36:17.280] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=24 save plane index: 2, Qtot=302975224 Qloss=-12155790, 7515 indices spanning [91072,98586] "gauss" 
[11:36:17.280] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=24 produce 98587 traces: 28701 wiener7, 0 decon_charge7, 21983 gauss7, frame tag: sigproc 
[11:36:17.280] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=24 output frame: frame: ident=144345 time=49 tick=512 with 98587 traces.  frame tags:[ "sigproc" ] 4 tagged trace sets:[ "gauss7":21983 [0] "mp2_roi7":36849 [0] "mp3_roi7":11054 [0] "wiener7":28701 [28701] ] cmm:[ ] 
[11:36:17.963] W [  glue  ] <ChannelSelector:chsel6> Untagged summary not supported, summary will be dropped. 
[11:36:17.963] D [  glue  ] <ChannelSelector:chsel6> input frame: ident=144345 time=49 tick=512 with 12288 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=144345 time=49 tick=512 with 1536 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] 
[11:36:17.964] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=24 input frame: frame: ident=144345 time=49 tick=512 with 1536 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] 
[11:36:17.964] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=24 init nticks=8640 tbinmin=0 tbinmax=8640 
[11:36:17.998] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=24 load plane index: 0, ntraces=1536, input bad regions: 0 
[11:36:20.158] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=24 load plane index: 1, ntraces=1536, input bad regions: 0 
[11:36:22.442] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=24 load plane index: 2, ntraces=1536, input bad regions: 0 
[11:36:39.213] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=24 save plane index: 0, Qtot=1035549782 Qloss=-40529162, 7754 indices spanning [38269,46022] "wiener" 
[11:36:39.448] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=24 save plane index: 0, Qtot=997918956 Qloss=-30587836, 5870 indices spanning [46023,51892] "gauss" 
[11:36:40.092] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=24 save plane index: 1, Qtot=472243204 Qloss=-38954648, 9138 indices spanning [51893,61030] "wiener" 
[11:36:40.325] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=24 save plane index: 1, Qtot=411698248 Qloss=-28055499, 6921 indices spanning [61031,67951] "gauss" 
[11:36:40.781] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=24 save plane index: 2, Qtot=365755891 Qloss=-31178349, 9812 indices spanning [67952,77763] "wiener" 
[11:36:41.221] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=24 save plane index: 2, Qtot=348884702 Qloss=-14198211, 7732 indices spanning [77764,85495] "gauss" 
[11:36:41.221] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=24 produce 85496 traces: 26704 wiener6, 0 decon_charge6, 20523 gauss6, frame tag: sigproc 
[11:36:41.221] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=24 output frame: frame: ident=144345 time=49 tick=512 with 85496 traces.  frame tags:[ "sigproc" ] 4 tagged trace sets:[ "gauss6":20523 [0] "mp2_roi6":29673 [0] "mp3_roi6":8596 [0] "wiener6":26704 [26704] ] cmm:[ ] 
[11:36:42.858] W [  glue  ] <ChannelSelector:chsel5> Untagged summary not supported, summary will be dropped. 
[11:36:42.859] D [  glue  ] <ChannelSelector:chsel5> input frame: ident=144345 time=49 tick=512 with 12288 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=144345 time=49 tick=512 with 1536 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] 
[11:36:42.859] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=24 input frame: frame: ident=144345 time=49 tick=512 with 1536 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] 
[11:36:42.859] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=24 init nticks=8640 tbinmin=0 tbinmax=8640 
[11:36:42.898] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=24 load plane index: 0, ntraces=1536, input bad regions: 0 
[11:36:45.115] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=24 load plane index: 1, ntraces=1536, input bad regions: 0 
[11:36:47.356] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=24 load plane index: 2, ntraces=1536, input bad regions: 0 

==================================================================================================================================
TimeTracker printout (sec)                          Min           Avg           Max         Median          RMS         nEvts   
==================================================================================================================================
Full event                                      6.1986e-05      349.128       2604.35       125.896       669.657        13     
----------------------------------------------------------------------------------------------------------------------------------
source:HDF5RawInput3(read)                      5.1545e-05    9.5729e-05    0.000177871   6.8667e-05    3.97251e-05      13     
produce:tpcrawdecoder:PDVDTPCReader               12.3338       13.2801       15.4616       12.9845       0.83038        13     
produce:triggerrawdecoder:PDVDTriggerReader4     0.289946      0.298223      0.343873      0.291132      0.0142983       13     
produce:pdvddaphne:DAPHNEReaderPDVD             0.00036724    0.000406768   0.000691895   0.000383725   8.27472e-05      13     
produce:ophit:OpHitFinder                       6.0822e-05    0.000101712   0.000481747   7.0005e-05    0.000110023      13     
produce:opflash:OpFlashFinderVerticalDrift      4.5278e-05    6.83258e-05   0.000277715   5.1513e-05    6.05577e-05      13     
produce:wclsdatavd:WireCellToolkit                56.7109       83.0099       146.066       67.035        29.0718        12     
produce:gaushit:GausHitFinder                    0.848972       1.35963       2.21161       1.3122       0.395889        12     
produce:nhitsfilter:NumberOfHitsFilter          0.000277056   0.000394596   0.000531929   0.000386921   7.80954e-05      12     
produce:reco3d:SpacePointSolver                   6.46843       11.4774       22.4374       10.633        4.68359        12     
produce:hitpdune:DisambigFromSpacePoints          0.10678      0.220323      0.569004      0.171389      0.133761        12     
produce:pandora:StandardPandora                   15.6373       262.857       2408.55       26.3502       660.569        12     
produce:pandoraTrack:LArPandoraTrackCreation     0.502933       1.38669       3.71345       1.00681      0.885804        12     
produce:pandoraGnocalo:GnocchiCalorimetry        0.019231      0.0301242     0.0504333     0.0307902    0.00780078       12     
[art]:TriggerResults:TriggerResultInserter      1.9691e-05    3.25199e-05   7.0973e-05    2.9077e-05    1.25159e-05      12     
end_path:out1:RootOutput                         7.088e-06    9.08633e-06   2.4056e-05    7.8435e-06    4.53204e-06      12     
end_path:out1:RootOutput(write)                   3.87128       4.30896       5.42019       4.17019      0.453768        12     
==================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 8589.93 MB
  Peak resident set size usage (VmHWM): 6709.64 MB
  Details saved in: 'mem.db'
====================================================================================================
%MSG-s ArtException:  PostEndJob 31-Oct-2025 11:37:59 CET ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- ScheduleExecutionFailure BEGIN
    Path: ProcessingStopped.
    ---- BadAlloc BEGIN
      A bad_alloc exception was thrown while processing module WireCellToolkit/wclsdatavd run: 40270 subRun: 1 event: 144345
      The job has probably exhausted the virtual memory available to the process.
    ---- BadAlloc END
    Exception going through path produce
  ---- ScheduleExecutionFailure END
---- EventProcessorFailure END
%MSG
Art has completed and will exit with status 1.
Error in reco1
justIN time: 2025-11-05 07:22:07 UTC       justIN version: 01.05.01