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Jobsub ID 236112.5@dunegpschedd02.fnal.gov

Jobsub ID236112.5@dunegpschedd02.fnal.gov
Workflow ID9405
Stage ID1
User nameykermaid@fnal.gov
HTCondor Groupgroup_dune.prod_mcsim
RequestedProcessors1
GPUNo
RSS bytes4193255424 (3999 MiB)
Wall seconds limit18000 (5 hours)
Submitted time2025-11-01 20:58:41
SiteNL_NIKHEF
EntryVIRGO_NL_NIKHEF_juk
Last heartbeat2025-11-01 21:07:46
From worker nodeHostnamewn-pep-011.farm.nikhef.nl
cpuinfoIntel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit129600 (36 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-11-01 21:03:33
Input filesvd-protodune:np02vd_raw_run040285_0003_df-s04-d2_dw_0_20251028T162653.hdf5
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-11-01 21:07:46
Saved logsjustin-logs:236112.5-dunegpschedd02.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

ter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[22:03:58.125] D [ pgraph ] connect <Node  type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node  type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[22:03:58.125] D [ pgraph ] connect <Node  type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node  type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
Inputer: "wclsRawFrameSource"
Outputer: "wclsFrameSaver:spsaver"
wclsFrameSaver: promising to produce recob::Wires named "gauss"
wclsFrameSaver: promising to produce recob::Wires named "wiener"
db: runtime1761668813
Scale HitLimit based on readout window size 10000
HitLimit = 33333
RawFrameSource: got 12288 raw::RawDigit objects
	input nticks=8000 keeping as is
[22:05:28.639] D [  main  ] executing 1 apps, thread limit 0:
[22:05:28.639] D [  main  ] executing 1 apps, thread limit 0:
[22:05:28.639] D [  main  ] executing app: "Pgrapher"
[22:05:28.639] D [ pgraph ] <Pgrapher:> executing graph 
[22:05:28.639] D [ pgraph ] executing with 26 nodes
[22:05:28.642] D [  glue  ] <FrameFanout:nfsp> call=0: input: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig" ] 0 tagged trace sets:[ ] cmm:[ ] output 0: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig0" ] 0 tagged trace sets:[ ] cmm:[ ] output 1: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig1" ] 0 tagged trace sets:[ ] cmm:[ ] output 2: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig2" ] 0 tagged trace sets:[ ] cmm:[ ] output 3: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig3" ] 0 tagged trace sets:[ ] cmm:[ ] output 4: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig4" ] 0 tagged trace sets:[ ] cmm:[ ] output 5: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] output 6: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output 7: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]  
[22:05:28.643] W [  glue  ] <ChannelSelector:chsel7> Untagged summary not supported, summary will be dropped. 
[22:05:28.644] D [  glue  ] <ChannelSelector:chsel7> input frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=582 time=0 tick=512 with 1536 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] 
[22:05:28.644] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 input frame: frame: ident=582 time=0 tick=512 with 1536 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] 
[22:05:28.644] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 init nticks=8000 tbinmin=0 tbinmax=8000 
[22:05:28.701] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 0, ntraces=1536, input bad regions: 0 
[22:05:30.170] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 1, ntraces=1536, input bad regions: 0 
[22:05:31.672] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 2, ntraces=1536, input bad regions: 0 
[22:06:07.070] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 0, Qtot=60446201237 Qloss=-53249355319, 6611 indices spanning [15432,22042] "wiener" 
[22:06:07.273] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 0, Qtot=58718293154 Qloss=-53221847739, 5887 indices spanning [22043,27929] "gauss" 
[22:06:07.894] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 1, Qtot=13413318881 Qloss=-4887322082, 5894 indices spanning [27930,33823] "wiener" 
[22:06:08.084] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 1, Qtot=11932177047 Qloss=-5030178355, 5325 indices spanning [33824,39148] "gauss" 
[22:06:08.446] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 2, Qtot=5711763347 Qloss=-3322314656, 17040 indices spanning [39149,56188] "wiener" 
[22:06:08.812] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 2, Qtot=5003109623 Qloss=-2613975746, 18766 indices spanning [56189,74954] "gauss" 
[22:06:08.813] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 produce 74955 traces: 29545 wiener7, 0 decon_charge7, 29978 gauss7, frame tag: sigproc 
[22:06:08.813] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 output frame: frame: ident=582 time=0 tick=512 with 74955 traces.  frame tags:[ "sigproc" ] 4 tagged trace sets:[ "gauss7":29978 [0] "mp2_roi7":11286 [0] "mp3_roi7":4146 [0] "wiener7":29545 [29545] ] cmm:[ ] 
[22:06:14.388] W [  glue  ] <ChannelSelector:chsel6> Untagged summary not supported, summary will be dropped. 
[22:06:14.389] D [  glue  ] <ChannelSelector:chsel6> input frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=582 time=0 tick=512 with 1536 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] 
[22:06:14.389] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 input frame: frame: ident=582 time=0 tick=512 with 1536 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] 
[22:06:14.390] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 init nticks=8000 tbinmin=0 tbinmax=8000 
[22:06:14.434] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 load plane index: 0, ntraces=1536, input bad regions: 0 
[22:06:16.231] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 load plane index: 1, ntraces=1536, input bad regions: 0 
[22:06:18.104] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 load plane index: 2, ntraces=1536, input bad regions: 0 
[22:06:21.654] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 save plane index: 0, Qtot=130139104 Qloss=-21997880, 2226 indices spanning [11192,13417] "wiener" 
[22:06:21.839] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 save plane index: 0, Qtot=126920944 Qloss=-19192292, 1817 indices spanning [13418,15234] "gauss" 
[22:06:22.175] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 save plane index: 1, Qtot=115468701 Qloss=-19498245, 2864 indices spanning [15235,18098] "wiener" 
[22:06:22.361] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 save plane index: 1, Qtot=109835102 Qloss=-16381127, 2402 indices spanning [18099,20500] "gauss" 
[22:06:22.752] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 save plane index: 2, Qtot=105164418 Qloss=-8234988, 4296 indices spanning [20501,24796] "wiener" 
[22:06:23.133] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 save plane index: 2, Qtot=101502947 Qloss=-4497306, 3512 indices spanning [24797,28308] "gauss" 
[22:06:23.133] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 produce 28309 traces: 9386 wiener6, 0 decon_charge6, 7731 gauss6, frame tag: sigproc 
[22:06:23.133] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 output frame: frame: ident=582 time=0 tick=512 with 28309 traces.  frame tags:[ "sigproc" ] 4 tagged trace sets:[ "gauss6":7731 [0] "mp2_roi6":9206 [0] "mp3_roi6":1986 [0] "wiener6":9386 [9386] ] cmm:[ ] 
[22:06:23.165] W [  glue  ] <ChannelSelector:chsel5> Untagged summary not supported, summary will be dropped. 
[22:06:23.166] D [  glue  ] <ChannelSelector:chsel5> input frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=582 time=0 tick=512 with 1536 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] 
[22:06:23.166] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=0 input frame: frame: ident=582 time=0 tick=512 with 1536 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] 
[22:06:23.167] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=0 init nticks=8000 tbinmin=0 tbinmax=8000 
[22:06:23.204] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=0 load plane index: 0, ntraces=1536, input bad regions: 0 
[22:06:24.955] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=0 load plane index: 1, ntraces=1536, input bad regions: 0 
[22:06:26.797] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=0 load plane index: 2, ntraces=1536, input bad regions: 0 
01-Nov-2025 22:07:27 CET  Opened output file with pattern "%ifb_reco_stage1_%tc_keepup.root"
Malformed TimeTracker database.  The TimeEvent table is empty, but
the TimeModule table is not.  This can happen if an exception has
been thrown from a module while processing the first event.  Any
saved database file is suspect and should not be used.

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 8589.36 MB
  Peak resident set size usage (VmHWM): 6525.82 MB
  Details saved in: 'mem.db'
====================================================================================================
%MSG-s ArtException:  PostEndJob 01-Nov-2025 22:07:28 CET ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- ScheduleExecutionFailure BEGIN
    Path: ProcessingStopped.
    ---- BadAlloc BEGIN
      A bad_alloc exception was thrown while processing module WireCellToolkit/wclsdatavd run: 40285 subRun: 1 event: 582
      The job has probably exhausted the virtual memory available to the process.
    ---- BadAlloc END
    Exception going through path produce
  ---- ScheduleExecutionFailure END
---- EventProcessorFailure END
%MSG
Art has completed and will exit with status 1.
Error in reco1
justIN time: 2025-11-04 01:29:12 UTC       justIN version: 01.05.01