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Jobsub ID 236119.1@dunegpschedd02.fnal.gov

Jobsub ID236119.1@dunegpschedd02.fnal.gov
Workflow ID9405
Stage ID1
User nameykermaid@fnal.gov
HTCondor Groupgroup_dune.prod_mcsim
RequestedProcessors1
GPUNo
RSS bytes4193255424 (3999 MiB)
Wall seconds limit18000 (5 hours)
Submitted time2025-11-01 21:22:42
SiteNL_NIKHEF
EntryVIRGO_NL_NIKHEF_juk
Last heartbeat2025-11-01 21:29:02
From worker nodeHostnamewn-pep-011.farm.nikhef.nl
cpuinfoIntel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit129600 (36 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-11-01 21:24:21
Input filesvd-protodune:np02vd_raw_run040285_0003_df-s04-d2_dw_0_20251028T162653.hdf5
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-11-01 21:29:02
Saved logsjustin-logs:236119.1-dunegpschedd02.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

ter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[22:24:45.989] D [ pgraph ] connect <Node  type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node  type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[22:24:45.989] D [ pgraph ] connect <Node  type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node  type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
Inputer: "wclsRawFrameSource"
Outputer: "wclsFrameSaver:spsaver"
wclsFrameSaver: promising to produce recob::Wires named "gauss"
wclsFrameSaver: promising to produce recob::Wires named "wiener"
db: runtime1761668813
Scale HitLimit based on readout window size 10000
HitLimit = 33333
RawFrameSource: got 12288 raw::RawDigit objects
	input nticks=8000 keeping as is
[22:25:55.747] D [  main  ] executing 1 apps, thread limit 0:
[22:25:55.747] D [  main  ] executing 1 apps, thread limit 0:
[22:25:55.747] D [  main  ] executing app: "Pgrapher"
[22:25:55.747] D [ pgraph ] <Pgrapher:> executing graph 
[22:25:55.747] D [ pgraph ] executing with 26 nodes
[22:25:55.750] D [  glue  ] <FrameFanout:nfsp> call=0: input: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig" ] 0 tagged trace sets:[ ] cmm:[ ] output 0: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig0" ] 0 tagged trace sets:[ ] cmm:[ ] output 1: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig1" ] 0 tagged trace sets:[ ] cmm:[ ] output 2: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig2" ] 0 tagged trace sets:[ ] cmm:[ ] output 3: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig3" ] 0 tagged trace sets:[ ] cmm:[ ] output 4: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig4" ] 0 tagged trace sets:[ ] cmm:[ ] output 5: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] output 6: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output 7: frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]  
[22:25:55.751] W [  glue  ] <ChannelSelector:chsel7> Untagged summary not supported, summary will be dropped. 
[22:25:55.752] D [  glue  ] <ChannelSelector:chsel7> input frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=582 time=0 tick=512 with 1536 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] 
[22:25:55.752] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 input frame: frame: ident=582 time=0 tick=512 with 1536 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] 
[22:25:55.752] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 init nticks=8000 tbinmin=0 tbinmax=8000 
[22:25:55.809] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 0, ntraces=1536, input bad regions: 0 
[22:25:57.291] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 1, ntraces=1536, input bad regions: 0 
[22:25:58.792] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 2, ntraces=1536, input bad regions: 0 
[22:26:36.542] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 0, Qtot=61301101235 Qloss=-15582760939, 6892 indices spanning [15656,22547] "wiener" 
[22:26:36.744] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 0, Qtot=59357855921 Qloss=-15568244561, 6082 indices spanning [22548,28629] "gauss" 
[22:26:37.347] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 1, Qtot=14852665395 Qloss=-5409791063, 5964 indices spanning [28630,34593] "wiener" 
[22:26:37.538] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 1, Qtot=13473660274 Qloss=-5556478065, 5447 indices spanning [34594,40040] "gauss" 
[22:26:37.893] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 2, Qtot=5918150289 Qloss=-3222149370, 17093 indices spanning [40041,57133] "wiener" 
[22:26:38.256] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 2, Qtot=5206697851 Qloss=-2510580890, 19371 indices spanning [57134,76504] "gauss" 
[22:26:38.257] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 produce 76505 traces: 29949 wiener7, 0 decon_charge7, 30900 gauss7, frame tag: sigproc 
[22:26:38.257] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 output frame: frame: ident=582 time=0 tick=512 with 76505 traces.  frame tags:[ "sigproc" ] 4 tagged trace sets:[ "gauss7":30900 [0] "mp2_roi7":11407 [0] "mp3_roi7":4249 [0] "wiener7":29949 [29949] ] cmm:[ ] 
[22:26:44.037] W [  glue  ] <ChannelSelector:chsel6> Untagged summary not supported, summary will be dropped. 
[22:26:44.038] D [  glue  ] <ChannelSelector:chsel6> input frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=582 time=0 tick=512 with 1536 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] 
[22:26:44.039] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 input frame: frame: ident=582 time=0 tick=512 with 1536 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] 
[22:26:44.039] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 init nticks=8000 tbinmin=0 tbinmax=8000 
[22:26:44.075] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 load plane index: 0, ntraces=1536, input bad regions: 0 
[22:26:45.768] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 load plane index: 1, ntraces=1536, input bad regions: 0 
[22:26:47.707] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 load plane index: 2, ntraces=1536, input bad regions: 0 
[22:26:51.200] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 save plane index: 0, Qtot=130139104 Qloss=-21997880, 2226 indices spanning [11192,13417] "wiener" 
[22:26:51.363] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 save plane index: 0, Qtot=126920944 Qloss=-19192292, 1817 indices spanning [13418,15234] "gauss" 
[22:26:51.674] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 save plane index: 1, Qtot=115468701 Qloss=-19498245, 2864 indices spanning [15235,18098] "wiener" 
[22:26:51.839] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 save plane index: 1, Qtot=109835102 Qloss=-16381127, 2402 indices spanning [18099,20500] "gauss" 
[22:26:52.229] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 save plane index: 2, Qtot=105164418 Qloss=-8234988, 4296 indices spanning [20501,24796] "wiener" 
[22:26:52.610] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 save plane index: 2, Qtot=101502947 Qloss=-4497306, 3512 indices spanning [24797,28308] "gauss" 
[22:26:52.611] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 produce 28309 traces: 9386 wiener6, 0 decon_charge6, 7731 gauss6, frame tag: sigproc 
[22:26:52.611] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 output frame: frame: ident=582 time=0 tick=512 with 28309 traces.  frame tags:[ "sigproc" ] 4 tagged trace sets:[ "gauss6":7731 [0] "mp2_roi6":9206 [0] "mp3_roi6":1986 [0] "wiener6":9386 [9386] ] cmm:[ ] 
[22:26:52.642] W [  glue  ] <ChannelSelector:chsel5> Untagged summary not supported, summary will be dropped. 
[22:26:52.643] D [  glue  ] <ChannelSelector:chsel5> input frame: ident=582 time=0 tick=512 with 12288 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=582 time=0 tick=512 with 1536 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] 
[22:26:52.643] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=0 input frame: frame: ident=582 time=0 tick=512 with 1536 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] 
[22:26:52.643] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=0 init nticks=8000 tbinmin=0 tbinmax=8000 
[22:26:52.680] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=0 load plane index: 0, ntraces=1536, input bad regions: 0 
[22:26:54.377] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=0 load plane index: 1, ntraces=1536, input bad regions: 0 
[22:26:56.127] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=0 load plane index: 2, ntraces=1536, input bad regions: 0 
01-Nov-2025 22:28:42 CET  Opened output file with pattern "%ifb_reco_stage1_%tc_keepup.root"
Malformed TimeTracker database.  The TimeEvent table is empty, but
the TimeModule table is not.  This can happen if an exception has
been thrown from a module while processing the first event.  Any
saved database file is suspect and should not be used.

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 8589.82 MB
  Peak resident set size usage (VmHWM): 6627.75 MB
  Details saved in: 'mem.db'
====================================================================================================
%MSG-s ArtException:  PostEndJob 01-Nov-2025 22:28:43 CET ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- ScheduleExecutionFailure BEGIN
    Path: ProcessingStopped.
    ---- BadAlloc BEGIN
      A bad_alloc exception was thrown while processing module WireCellToolkit/wclsdatavd run: 40285 subRun: 1 event: 582
      The job has probably exhausted the virtual memory available to the process.
    ---- BadAlloc END
    Exception going through path produce
  ---- ScheduleExecutionFailure END
---- EventProcessorFailure END
%MSG
Art has completed and will exit with status 1.
Error in reco1
justIN time: 2025-11-04 01:33:50 UTC       justIN version: 01.05.01