Jobsub ID 240221.84@dunegpschedd01.fnal.gov
| Jobsub ID | 240221.84@dunegpschedd01.fnal.gov |
| Workflow ID | 9375 |
| Stage ID | 1 |
| User name | ykermaid@fnal.gov |
| HTCondor Group | group_dune.prod_mcsim |
| Requested | Processors | 1 |
| GPU | No |
| RSS bytes | 4193255424 (3999 MiB) |
| Wall seconds limit | 18000 (5 hours) |
| Submitted time | 2025-10-29 12:44:27 |
| Site | NL_NIKHEF |
| Entry | VIRGO_NL_NIKHEF_klomp |
| Last heartbeat | 2025-10-29 12:55:15 |
| From worker node | Hostname | wn-sate-048.farm.nikhef.nl |
| cpuinfo | AMD EPYC 7551P 32-Core Processor |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 129600 (36 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | aborted |
| Started | 2025-10-29 12:45:48 |
| Input files | vd-protodune:np02vd_raw_run040267_0075_df-s04-d1_dw_0_20251025T204128.hdf5
|
| Outputting started | |
| Output files | |
| Finished | 2025-10-29 12:55:15 |
| List job events Cached HTCondor job logs |
Jobscript log (last 10,000 characters)
WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[13:46:24.133] D [ pgraph ] connect <Node type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[13:46:24.133] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[13:46:24.133] D [ pgraph ] connect <Node type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[13:46:24.133] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[13:46:24.133] D [ pgraph ] connect <Node type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[13:46:24.133] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[13:46:24.133] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[13:46:24.133] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[13:46:24.133] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
Inputer: "wclsRawFrameSource"
Outputer: "wclsFrameSaver:spsaver"
wclsFrameSaver: promising to produce recob::Wires named "gauss"
wclsFrameSaver: promising to produce recob::Wires named "wiener"
db: runtime1761424887
Scale HitLimit based on readout window size 10000
HitLimit = 33333
RawFrameSource: got 12288 raw::RawDigit objects
input nticks=8642 keeping as is
[13:48:51.054] D [ main ] executing 1 apps, thread limit 0:
[13:48:51.054] D [ main ] executing 1 apps, thread limit 0:
[13:48:51.054] D [ main ] executing app: "Pgrapher"
[13:48:51.054] D [ pgraph ] <Pgrapher:> executing graph
[13:48:51.054] D [ pgraph ] executing with 26 nodes
[13:48:51.056] D [ glue ] <FrameFanout:nfsp> call=0: input: frame: ident=13949 time=0 tick=512 with 12288 traces. frame tags:[ "orig" ] 0 tagged trace sets:[ ] cmm:[ ] output 0: frame: ident=13949 time=0 tick=512 with 12288 traces. frame tags:[ "orig0" ] 0 tagged trace sets:[ ] cmm:[ ] output 1: frame: ident=13949 time=0 tick=512 with 12288 traces. frame tags:[ "orig1" ] 0 tagged trace sets:[ ] cmm:[ ] output 2: frame: ident=13949 time=0 tick=512 with 12288 traces. frame tags:[ "orig2" ] 0 tagged trace sets:[ ] cmm:[ ] output 3: frame: ident=13949 time=0 tick=512 with 12288 traces. frame tags:[ "orig3" ] 0 tagged trace sets:[ ] cmm:[ ] output 4: frame: ident=13949 time=0 tick=512 with 12288 traces. frame tags:[ "orig4" ] 0 tagged trace sets:[ ] cmm:[ ] output 5: frame: ident=13949 time=0 tick=512 with 12288 traces. frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] output 6: frame: ident=13949 time=0 tick=512 with 12288 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output 7: frame: ident=13949 time=0 tick=512 with 12288 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[13:48:51.057] W [ glue ] <ChannelSelector:chsel7> Untagged summary not supported, summary will be dropped.
[13:48:51.057] D [ glue ] <ChannelSelector:chsel7> input frame: ident=13949 time=0 tick=512 with 12288 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=13949 time=0 tick=512 with 1536 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[13:48:51.057] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 input frame: frame: ident=13949 time=0 tick=512 with 1536 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[13:48:51.058] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 init nticks=8642 tbinmin=0 tbinmax=8642
[13:48:51.117] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 0, ntraces=1536, input bad regions: 0
[13:48:53.775] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 1, ntraces=1536, input bad regions: 0
[13:48:56.485] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 2, ntraces=1536, input bad regions: 0
[13:49:51.362] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 0, Qtot=54267974378 Qloss=-33316713206, 6521 indices spanning [18529,25049] "wiener"
[13:49:51.691] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 0, Qtot=52339816899 Qloss=-33473568283, 6038 indices spanning [25050,31087] "gauss"
[13:49:52.937] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 1, Qtot=30052481178 Qloss=-7769339757, 11231 indices spanning [31088,42318] "wiener"
[13:49:53.251] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 1, Qtot=25451737593 Qloss=-8002636874, 10719 indices spanning [42319,53037] "gauss"
[13:49:53.783] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 2, Qtot=3586063698 Qloss=-2371347032, 12876 indices spanning [53038,65913] "wiener"
[13:49:54.330] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 2, Qtot=3037190310 Qloss=-1827440342, 15129 indices spanning [65914,81042] "gauss"
[13:49:54.331] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 produce 81043 traces: 30628 wiener7, 0 decon_charge7, 31886 gauss7, frame tag: sigproc
[13:49:54.331] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 output frame: frame: ident=13949 time=0 tick=512 with 81043 traces. frame tags:[ "sigproc" ] 4 tagged trace sets:[ "gauss7":31886 [0] "mp2_roi7":13180 [0] "mp3_roi7":5349 [0] "wiener7":30628 [30628] ] cmm:[ ]
[13:49:59.443] W [ glue ] <ChannelSelector:chsel6> Untagged summary not supported, summary will be dropped.
[13:49:59.444] D [ glue ] <ChannelSelector:chsel6> input frame: ident=13949 time=0 tick=512 with 12288 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=13949 time=0 tick=512 with 1536 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ]
[13:49:59.444] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 input frame: frame: ident=13949 time=0 tick=512 with 1536 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ]
[13:49:59.444] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 init nticks=8642 tbinmin=0 tbinmax=8642
[13:49:59.481] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 load plane index: 0, ntraces=1536, input bad regions: 0
[13:50:02.400] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 load plane index: 1, ntraces=1536, input bad regions: 0
[13:50:05.545] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 load plane index: 2, ntraces=1536, input bad regions: 0
29-Oct-2025 13:51:36 CET Opened output file with pattern "%ifb_reco_stage1_%tc_keepup.root"
Malformed TimeTracker database. The TimeEvent table is empty, but
the TimeModule table is not. This can happen if an exception has
been thrown from a module while processing the first event. Any
saved database file is suspect and should not be used.
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 8589.81 MB
Peak resident set size usage (VmHWM): 6596.91 MB
Details saved in: 'mem.db'
====================================================================================================
%MSG-s ArtException: PostEndJob 29-Oct-2025 13:51:38 CET ModuleEndJob
---- EventProcessorFailure BEGIN
EventProcessor: an exception occurred during current event processing
---- ScheduleExecutionFailure BEGIN
Path: ProcessingStopped.
---- BadAlloc BEGIN
A bad_alloc exception was thrown while processing module WireCellToolkit/wclsdatavd run: 40267 subRun: 1 event: 13949
The job has probably exhausted the virtual memory available to the process.
---- BadAlloc END
Exception going through path produce
---- ScheduleExecutionFailure END
---- EventProcessorFailure END
%MSG
Art has completed and will exit with status 1.
Error in reco1 