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Jobsub ID 241045.0@dunegpschedd01.fnal.gov

Jobsub ID241045.0@dunegpschedd01.fnal.gov
Workflow ID9404
Stage ID1
User nameykermaid@fnal.gov
HTCondor Groupgroup_dune.prod_mcsim
RequestedProcessors1
GPUNo
RSS bytes4193255424 (3999 MiB)
Wall seconds limit18000 (5 hours)
Submitted time2025-10-30 17:05:54
SiteNL_NIKHEF
EntryVIRGO_NL_NIKHEF_juk
Last heartbeat2025-10-30 17:12:15
From worker nodeHostnamewn-pep-012.farm.nikhef.nl
cpuinfoIntel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit129600 (36 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-10-30 17:07:55
Input filesvd-protodune:np02vd_raw_run040270_0001_df-s03-d3_dw_0_20251027T123041.hdf5
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-10-30 17:12:15
Saved logsjustin-logs:241045.0-dunegpschedd01.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

ell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[18:08:27.365] D [ pgraph ] connect <Node  type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node  type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[18:08:27.365] D [ pgraph ] connect <Node  type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node  type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[18:08:27.365] D [ pgraph ] connect <Node  type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node  type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[18:08:27.365] D [ pgraph ] connect <Node  type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node  type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[18:08:27.365] D [ pgraph ] connect <Node  type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node  type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[18:08:27.365] D [ pgraph ] connect <Node  type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node  type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[18:08:27.365] D [ pgraph ] connect <Node  type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node  type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[18:08:27.365] D [ pgraph ] connect <Node  type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node  type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[18:08:27.366] D [ pgraph ] connect <Node  type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node  type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
Inputer: "wclsRawFrameSource"
Outputer: "wclsFrameSaver:spsaver"
wclsFrameSaver: promising to produce recob::Wires named "gauss"
wclsFrameSaver: promising to produce recob::Wires named "wiener"
db: runtime1761568239
Scale HitLimit based on readout window size 10000
HitLimit = 33333
RawFrameSource: got 12288 raw::RawDigit objects
	input nticks=8000 keeping as is
[18:08:56.988] D [  main  ] executing 1 apps, thread limit 0:
[18:08:56.989] D [  main  ] executing 1 apps, thread limit 0:
[18:08:56.989] D [  main  ] executing app: "Pgrapher"
[18:08:56.989] D [ pgraph ] <Pgrapher:> executing graph 
[18:08:56.989] D [ pgraph ] executing with 26 nodes
[18:08:56.992] D [  glue  ] <FrameFanout:nfsp> call=0: input: frame: ident=195 time=0 tick=512 with 12288 traces.  frame tags:[ "orig" ] 0 tagged trace sets:[ ] cmm:[ ] output 0: frame: ident=195 time=0 tick=512 with 12288 traces.  frame tags:[ "orig0" ] 0 tagged trace sets:[ ] cmm:[ ] output 1: frame: ident=195 time=0 tick=512 with 12288 traces.  frame tags:[ "orig1" ] 0 tagged trace sets:[ ] cmm:[ ] output 2: frame: ident=195 time=0 tick=512 with 12288 traces.  frame tags:[ "orig2" ] 0 tagged trace sets:[ ] cmm:[ ] output 3: frame: ident=195 time=0 tick=512 with 12288 traces.  frame tags:[ "orig3" ] 0 tagged trace sets:[ ] cmm:[ ] output 4: frame: ident=195 time=0 tick=512 with 12288 traces.  frame tags:[ "orig4" ] 0 tagged trace sets:[ ] cmm:[ ] output 5: frame: ident=195 time=0 tick=512 with 12288 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] output 6: frame: ident=195 time=0 tick=512 with 12288 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output 7: frame: ident=195 time=0 tick=512 with 12288 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]  
[18:08:56.993] W [  glue  ] <ChannelSelector:chsel7> Untagged summary not supported, summary will be dropped. 
[18:08:56.995] D [  glue  ] <ChannelSelector:chsel7> input frame: ident=195 time=0 tick=512 with 12288 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=195 time=0 tick=512 with 1536 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] 
[18:08:56.995] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 input frame: frame: ident=195 time=0 tick=512 with 1536 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] 
[18:08:56.995] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 init nticks=8000 tbinmin=0 tbinmax=8000 
[18:08:57.066] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 0, ntraces=1536, input bad regions: 0 
[18:08:58.751] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 1, ntraces=1536, input bad regions: 0 
[18:09:00.483] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 2, ntraces=1536, input bad regions: 0 
[18:10:09.210] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 0, Qtot=102727753203 Qloss=-96410327616, 7834 indices spanning [18882,26715] "wiener" 
[18:10:09.452] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 0, Qtot=100294081004 Qloss=-97022574301, 7132 indices spanning [26716,33847] "gauss" 
[18:10:11.033] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 1, Qtot=46138087470 Qloss=-12940778029, 16858 indices spanning [33848,50705] "wiener" 
[18:10:11.269] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 1, Qtot=39393973406 Qloss=-13292886031, 16438 indices spanning [50706,67143] "gauss" 
[18:10:11.701] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 2, Qtot=5752356979 Qloss=-2965006043, 14489 indices spanning [67144,81632] "wiener" 
[18:10:12.131] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 save plane index: 2, Qtot=5070275437 Qloss=-2282881527, 16531 indices spanning [81633,98163] "gauss" 
[18:10:12.132] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 produce 98164 traces: 39181 wiener7, 0 decon_charge7, 40101 gauss7, frame tag: sigproc 
[18:10:12.132] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 output frame: frame: ident=195 time=0 tick=512 with 98164 traces.  frame tags:[ "sigproc" ] 4 tagged trace sets:[ "gauss7":40101 [0] "mp2_roi7":12363 [0] "mp3_roi7":6519 [0] "wiener7":39181 [39181] ] cmm:[ ] 
[18:10:25.123] W [  glue  ] <ChannelSelector:chsel6> Untagged summary not supported, summary will be dropped. 
[18:10:25.124] D [  glue  ] <ChannelSelector:chsel6> input frame: ident=195 time=0 tick=512 with 12288 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=195 time=0 tick=512 with 1536 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] 
[18:10:25.125] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 input frame: frame: ident=195 time=0 tick=512 with 1536 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] 
[18:10:25.125] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 init nticks=8000 tbinmin=0 tbinmax=8000 
[18:10:25.173] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 load plane index: 0, ntraces=1536, input bad regions: 0 
[18:10:27.405] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 load plane index: 1, ntraces=1536, input bad regions: 0 
[18:10:29.692] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=0 load plane index: 2, ntraces=1536, input bad regions: 0 
30-Oct-2025 18:11:43 CET  Opened output file with pattern "%ifb_reco_stage1_%tc_keepup.root"
Malformed TimeTracker database.  The TimeEvent table is empty, but
the TimeModule table is not.  This can happen if an exception has
been thrown from a module while processing the first event.  Any
saved database file is suspect and should not be used.

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 8589.46 MB
  Peak resident set size usage (VmHWM): 6670.55 MB
  Details saved in: 'mem.db'
====================================================================================================
%MSG-s ArtException:  PostEndJob 30-Oct-2025 18:11:45 CET ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- ScheduleExecutionFailure BEGIN
    Path: ProcessingStopped.
    ---- BadAlloc BEGIN
      A bad_alloc exception was thrown while processing module WireCellToolkit/wclsdatavd run: 40270 subRun: 1 event: 195
      The job has probably exhausted the virtual memory available to the process.
    ---- BadAlloc END
    Exception going through path produce
  ---- ScheduleExecutionFailure END
---- EventProcessorFailure END
%MSG
Art has completed and will exit with status 1.
Error in reco1
justIN time: 2025-11-05 07:24:46 UTC       justIN version: 01.05.01