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Jobsub ID 242448.19@dunegpschedd01.fnal.gov

Jobsub ID242448.19@dunegpschedd01.fnal.gov
Workflow ID9531
Stage ID1
User nameykermaid@fnal.gov
HTCondor Groupgroup_dune.prod_mcsim
RequestedProcessors2
GPUNo
RSS bytes4193255424 (3999 MiB)
Wall seconds limit18000 (5 hours)
Submitted time2025-11-03 17:07:05
SiteUK_RAL-Tier1
EntryLIGO_UK_RAL_arc_ce03
Last heartbeat2025-11-03 19:57:57
From worker nodeHostnamedune001-78872.0-lcg2629.gridpp.rl.ac.uk
cpuinfoAMD EPYC 7763 64-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors2
RSS bytes4194304000 (4000 MiB)
Wall seconds limit216000 (60 hours)
GPU
Inner Apptainer?True
Job stateoutputting_failed
Started2025-11-03 17:17:47
Input filesvd-protodune:np02vd_raw_run040346_2829_df-s04-d3_dw_0_20251103T033850.hdf5
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-11-03 19:57:47
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

--------------------------------------------------------------------------------------------------------------------------
source:HDF5RawInput3(read)                      6.0971e-05    0.000119667   0.000318646   0.000103872   5.36373e-05      23     
produce:tpcrawdecoder:PDVDTPCReader               14.7239       15.6396       16.7187       15.5356      0.632342        23     
produce:triggerrawdecoder:PDVDTriggerReader4     0.681217      0.700411      0.743727      0.695489      0.0177718       23     
produce:pdvddaphne:DAPHNEReaderPDVD             0.000263055   0.000519098   0.00106282    0.000481919   0.000157913      23     
produce:ophit:OpHitFinder                       5.9672e-05    0.000164817   0.000848436   0.000136203   0.000150805      23     
produce:opflash:OpFlashFinderVerticalDrift      6.3371e-05    0.000124533   0.000622592   9.4132e-05    0.000109441      23     
produce:wclsdatavd:WireCellToolkit                54.2969       85.5414       146.526       83.0462       25.902         23     
produce:gaushit:GausHitFinder                    0.964013       1.62778       4.32798       1.34166      0.765068        23     
produce:nhitsfilter:NumberOfHitsFilter          0.000210524   0.000386812   0.000698563   0.000377567   0.000141884      23     
produce:reco3d:SpacePointSolver                   7.3305        17.0141       55.9096       13.2488       10.5036        23     
produce:hitpdune:DisambigFromSpacePoints         0.125058      0.341451       1.06755       0.27557      0.233966        23     
produce:pandora:StandardPandora                   16.9866       284.761       5181.41       35.1052       1046.25        23     
produce:pandoraTrack:LArPandoraTrackCreation     0.536363       2.5691        22.4331       1.31646       4.4234         23     
produce:pandoraGnocalo:GnocchiCalorimetry        0.0233283     0.0438227     0.104193      0.0386325     0.0188445       23     
[art]:TriggerResults:TriggerResultInserter      1.8581e-05    4.55574e-05   0.000150193   4.0711e-05    2.73332e-05      23     
end_path:out1:RootOutput                         4.24e-06     1.09172e-05   5.0551e-05     8.92e-06     8.96772e-06      23     
end_path:out1:RootOutput(write)                   3.66249       5.21742       6.88543       4.97785      0.984356        23     
==================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 6899.68 MB
  Peak resident set size usage (VmHWM): 4576.23 MB
  Details saved in: 'mem.db'
====================================================================================================
Art has completed and will exit with status 0.
Output files:
\tReco: np02vd_raw_run040346_2829_df-s04-d3_dw_0_20251103T033850_reco_stage1_20251103T195715_keepup.root
\tHists: np02vd_raw_run040346_2829_df-s04-d3_dw_0_20251103T033850_reco_stage1_20251103T195715_keepup_hists.root
Forming reco metadata
Successfully opened file np02vd_raw_run040346_2829_df-s04-d3_dw_0_20251103T033850_reco_stage1_20251103T195715_keepup.root
Traceback (most recent call last):
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connection.py", line 169, in _new_conn
    conn = connection.create_connection(
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/util/connection.py", line 96, in create_connection
    raise err
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/util/connection.py", line 86, in create_connection
    sock.connect(sa)
ConnectionRefusedError: [Errno 111] Connection refused

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 699, in urlopen
    httplib_response = self._make_request(
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 382, in _make_request
    self._validate_conn(conn)
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 1010, in _validate_conn
    conn.connect()
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connection.py", line 353, in connect
    conn = self._new_conn()
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connection.py", line 181, in _new_conn
    raise NewConnectionError(
urllib3.exceptions.NewConnectionError: <urllib3.connection.HTTPSConnection object at 0x7feac2ef1520>: Failed to establish a new connection: [Errno 111] Connection refused

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/adapters.py", line 439, in send
    resp = conn.urlopen(
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 755, in urlopen
    retries = retries.increment(
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/util/retry.py", line 574, in increment
    raise MaxRetryError(_pool, url, error or ResponseError(cause))
urllib3.exceptions.MaxRetryError: HTTPSConnectionPool(host='metacat.fnal.gov', port=9443): Max retries exceeded with url: /dune_meta_prod/app/data/file?with_metadata=yes&with_provenance=no&with_datasets=no&name=np02vd_raw_run040346_2829_df-s04-d3_dw_0_20251103T033850.hdf5&namespace=vd-protodune (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7feac2ef1520>: Failed to establish a new connection: [Errno 111] Connection refused'))

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/runpy.py", line 197, in _run_module_as_main
    return _run_code(code, main_globals, None,
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/runpy.py", line 87, in _run_code
    exec(code, run_globals)
  File "/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/ff18e11900bfcc2b467fc81eba35d7e7de647a80/meta_maker.py", line 48, in <module>
    results = inherit_metadata.inherit(args.parent)
  File "/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/ff18e11900bfcc2b467fc81eba35d7e7de647a80/inherit_metadata.py", line 72, in inherit
    'metadata':get_parent_md(parent_name),
  File "/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/ff18e11900bfcc2b467fc81eba35d7e7de647a80/inherit_metadata.py", line 27, in get_parent_md
    parent_file = mc.get_file(did=parent_name, with_metadata=True,
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 1259, in get_file
    return self.get_json(url)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 206, in get_json
    return self.unpack_json_data(self.send_request("get", uri_suffix, headers=headers, stream=True))
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 154, in send_request
    self.LastResponse = response = self.retry_request(method, url, headers=headers, **args)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 131, in retry_request
    response = requests.get(url, timeout=self.Timeout, **args)
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/api.py", line 75, in get
    return request('get', url, params=params, **kwargs)
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/api.py", line 61, in request
    return session.request(method=method, url=url, **kwargs)
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/sessions.py", line 542, in request
    resp = self.send(prep, **send_kwargs)
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/sessions.py", line 655, in send
    r = adapter.send(request, **kwargs)
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/adapters.py", line 516, in send
    raise ConnectionError(e, request=request)
requests.exceptions.ConnectionError: HTTPSConnectionPool(host='metacat.fnal.gov', port=9443): Max retries exceeded with url: /dune_meta_prod/app/data/file?with_metadata=yes&with_provenance=no&with_datasets=no&name=np02vd_raw_run040346_2829_df-s04-d3_dw_0_20251103T033850.hdf5&namespace=vd-protodune (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7feac2ef1520>: Failed to establish a new connection: [Errno 111] Connection refused'))
Error in reco metadata
justIN time: 2025-11-05 05:04:55 UTC       justIN version: 01.05.01