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Jobsub ID 252944.20@dunegpschedd02.fnal.gov

Jobsub ID252944.20@dunegpschedd02.fnal.gov
Workflow ID10785
Stage ID1
User nameimawby@fnal.gov
RequestedProcessors1
GPUNo
RSS bytes1048576000 (1000 MiB)
Wall seconds limit7200 (2 hours)
Submitted time2025-11-26 10:49:27
SiteUS_PuertoRico
EntryCMS_T3_US_PuertoRico_UPRM
Last heartbeat2025-11-26 11:12:12
From worker nodeHostnamecompute-2-5.local
cpuinfoIntel(R) Xeon(R) CPU W3550 @ 3.07GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes1048576000 (1000 MiB)
Wall seconds limit171000 (47 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-11-26 10:52:11
Input filesfardet-hd:nu_dune10kt_1x2x6_1429_713_20230828T004108Z_gen_g4_detsim_hitreco__20240222T223931Z_reco2.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-11-26 11:12:03
Saved logsjustin-logs:252944.20-dunegpschedd02.fnal.gov.logs.tgz
List job events     (HTCondor job logs unavailable)

Jobscript log (last 10,000 characters)

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Input PFN = root://fndcadoor.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-hd/d7/61/nu_dune10kt_1x2x6_1429_713_20230828T004108Z_gen_g4_detsim_hitreco__20240222T223931Z_reco2.root
../justin-jobscript: line 64:  1044 Segmentation fault      lar -c $FCL_FILE $events_option "$pfn" > ${fname}_reco_${now}.log 2>&1
lar exit code 139
=== Start last 100 lines of lar log file ===
Begin processing the 2nd record. run: 1429 subRun: 1 event: 71302 at 26-Nov-2025 07:00:45 AST
Begin processing the 3rd record. run: 1429 subRun: 1 event: 71303 at 26-Nov-2025 07:00:53 AST
Begin processing the 4th record. run: 1429 subRun: 1 event: 71304 at 26-Nov-2025 07:01:00 AST
Begin processing the 5th record. run: 1429 subRun: 1 event: 71305 at 26-Nov-2025 07:01:06 AST
Begin processing the 6th record. run: 1429 subRun: 1 event: 71306 at 26-Nov-2025 07:01:20 AST
Begin processing the 7th record. run: 1429 subRun: 1 event: 71307 at 26-Nov-2025 07:01:27 AST
Begin processing the 8th record. run: 1429 subRun: 1 event: 71308 at 26-Nov-2025 07:01:33 AST
Begin processing the 9th record. run: 1429 subRun: 1 event: 71309 at 26-Nov-2025 07:01:52 AST
Begin processing the 10th record. run: 1429 subRun: 1 event: 71310 at 26-Nov-2025 07:01:58 AST
Begin processing the 11th record. run: 1429 subRun: 1 event: 71311 at 26-Nov-2025 07:02:09 AST
Begin processing the 12th record. run: 1429 subRun: 1 event: 71312 at 26-Nov-2025 07:02:15 AST
Begin processing the 13th record. run: 1429 subRun: 1 event: 71313 at 26-Nov-2025 07:02:21 AST
Begin processing the 14th record. run: 1429 subRun: 1 event: 71314 at 26-Nov-2025 07:02:33 AST
Begin processing the 15th record. run: 1429 subRun: 1 event: 71315 at 26-Nov-2025 07:02:41 AST
Begin processing the 16th record. run: 1429 subRun: 1 event: 71316 at 26-Nov-2025 07:02:50 AST
Begin processing the 17th record. run: 1429 subRun: 1 event: 71317 at 26-Nov-2025 07:02:57 AST
Begin processing the 18th record. run: 1429 subRun: 1 event: 71318 at 26-Nov-2025 07:03:03 AST
Begin processing the 19th record. run: 1429 subRun: 1 event: 71319 at 26-Nov-2025 07:03:09 AST
Begin processing the 20th record. run: 1429 subRun: 1 event: 71320 at 26-Nov-2025 07:03:16 AST
Begin processing the 21st record. run: 1429 subRun: 1 event: 71321 at 26-Nov-2025 07:03:22 AST
Begin processing the 22nd record. run: 1429 subRun: 1 event: 71322 at 26-Nov-2025 07:03:28 AST
Begin processing the 23rd record. run: 1429 subRun: 1 event: 71323 at 26-Nov-2025 07:03:34 AST
Begin processing the 24th record. run: 1429 subRun: 1 event: 71324 at 26-Nov-2025 07:03:44 AST
Begin processing the 25th record. run: 1429 subRun: 1 event: 71325 at 26-Nov-2025 07:03:52 AST
Begin processing the 26th record. run: 1429 subRun: 1 event: 71326 at 26-Nov-2025 07:03:59 AST
PandoraContentApi::GetList(*this, m_inputHitListName, pCaloHitList) return STATUS_CODE_NOT_INITIALIZED
    in function: GetVolumeIdToHitListMap
    in file:     /exp/dune/app/users/imawby/dunesw_splitting/srcs/larpandoracontent/larpandoracontent/LArControlFlow/MasterAlgorithm.cc line#: 271
this->GetVolumeIdToHitListMap(volumeIdToHitListMap) return STATUS_CODE_NOT_INITIALIZED
    in function: Run
    in file:     /exp/dune/app/users/imawby/dunesw_splitting/srcs/larpandoracontent/larpandoracontent/LArControlFlow/MasterAlgorithm.cc line#: 165
iter->second->Run() throw STATUS_CODE_NOT_INITIALIZED
    in function: RunAlgorithm
    in file:     /scratch/workspace/build-larbase/BUILDTYPE/prof/QUAL/s131-e26/label1/swarm/label2/SLF7/build/pandora/v03_16_00l/src/pandora-v03-16-00/PandoraSDK-v03-04-01/src/Api/PandoraContentApiImpl.cc line#: 235
Failure in algorithm Alg0002, LArDLMaster, STATUS_CODE_NOT_INITIALIZED
Begin processing the 27th record. run: 1429 subRun: 1 event: 71327 at 26-Nov-2025 07:04:01 AST
Begin processing the 28th record. run: 1429 subRun: 1 event: 71328 at 26-Nov-2025 07:04:08 AST
Begin processing the 29th record. run: 1429 subRun: 1 event: 71329 at 26-Nov-2025 07:04:14 AST
Begin processing the 30th record. run: 1429 subRun: 1 event: 71330 at 26-Nov-2025 07:04:20 AST
Begin processing the 31st record. run: 1429 subRun: 1 event: 71331 at 26-Nov-2025 07:04:37 AST
PandoraContentApi::GetList(*this, listname, pCaloHitList) return STATUS_CODE_NOT_INITIALIZED
    in function: Infer
    in file:     /exp/dune/app/users/imawby/dunesw_splitting/srcs/larpandoracontent/larpandoradlcontent/LArVertex/DlVertexingAlgorithm.cc line#: 192
iter->second->Run() throw STATUS_CODE_NOT_INITIALIZED
    in function: RunAlgorithm
    in file:     /scratch/workspace/build-larbase/BUILDTYPE/prof/QUAL/s131-e26/label1/swarm/label2/SLF7/build/pandora/v03_16_00l/src/pandora-v03-16-00/PandoraSDK-v03-04-01/src/Api/PandoraContentApiImpl.cc line#: 235
Failure in algorithm Alg0002, LArDLVertexing, STATUS_CODE_NOT_INITIALIZED
DLVertexing: Input vertex list is empty! Can't perform pass 2
PandoraContentApi::GetList(*this, listname, pCaloHitList) return STATUS_CODE_NOT_INITIALIZED
    in function: Infer
    in file:     /exp/dune/app/users/imawby/dunesw_splitting/srcs/larpandoracontent/larpandoradlcontent/LArVertex/DlSecondaryVertexingAlgorithm.cc line#: 186
iter->second->Run() throw STATUS_CODE_NOT_INITIALIZED
    in function: RunAlgorithm
    in file:     /scratch/workspace/build-larbase/BUILDTYPE/prof/QUAL/s131-e26/label1/swarm/label2/SLF7/build/pandora/v03_16_00l/src/pandora-v03-16-00/PandoraSDK-v03-04-01/src/Api/PandoraContentApiImpl.cc line#: 235
Failure in algorithm Alg0004, LArDLSecondaryVertexing, STATUS_CODE_NOT_INITIALIZED
PandoraContentApi::GetList(*this, m_caloHitListNameU, m_pCaloHitListU) return STATUS_CODE_NOT_INITIALIZED
    in function: GetLists
    in file:     /exp/dune/app/users/imawby/dunesw_splitting/srcs/larpandoracontent/larpandoradlcontent/LArTwoDReco/DLThreeDClusterSplittingAlgorithm.cc line#: 286
Begin processing the 32nd record. run: 1429 subRun: 1 event: 71332 at 26-Nov-2025 07:04:39 AST
Begin processing the 33rd record. run: 1429 subRun: 1 event: 71333 at 26-Nov-2025 07:04:47 AST
Begin processing the 34th record. run: 1429 subRun: 1 event: 71334 at 26-Nov-2025 07:04:54 AST
Begin processing the 35th record. run: 1429 subRun: 1 event: 71335 at 26-Nov-2025 07:05:00 AST
Begin processing the 36th record. run: 1429 subRun: 1 event: 71336 at 26-Nov-2025 07:05:07 AST
Begin processing the 37th record. run: 1429 subRun: 1 event: 71337 at 26-Nov-2025 07:05:12 AST
Begin processing the 38th record. run: 1429 subRun: 1 event: 71338 at 26-Nov-2025 07:05:19 AST
Begin processing the 39th record. run: 1429 subRun: 1 event: 71339 at 26-Nov-2025 07:05:26 AST
Begin processing the 40th record. run: 1429 subRun: 1 event: 71340 at 26-Nov-2025 07:05:32 AST
Begin processing the 41st record. run: 1429 subRun: 1 event: 71341 at 26-Nov-2025 07:05:38 AST
Begin processing the 42nd record. run: 1429 subRun: 1 event: 71342 at 26-Nov-2025 07:05:47 AST
Begin processing the 43rd record. run: 1429 subRun: 1 event: 71343 at 26-Nov-2025 07:05:57 AST
Begin processing the 44th record. run: 1429 subRun: 1 event: 71344 at 26-Nov-2025 07:06:04 AST
Begin processing the 45th record. run: 1429 subRun: 1 event: 71345 at 26-Nov-2025 07:06:10 AST
Begin processing the 46th record. run: 1429 subRun: 1 event: 71346 at 26-Nov-2025 07:06:22 AST
Begin processing the 47th record. run: 1429 subRun: 1 event: 71347 at 26-Nov-2025 07:06:30 AST
Begin processing the 48th record. run: 1429 subRun: 1 event: 71348 at 26-Nov-2025 07:06:36 AST
Begin processing the 49th record. run: 1429 subRun: 1 event: 71349 at 26-Nov-2025 07:06:43 AST
Begin processing the 50th record. run: 1429 subRun: 1 event: 71350 at 26-Nov-2025 07:07:28 AST
Begin processing the 51st record. run: 1429 subRun: 1 event: 71351 at 26-Nov-2025 07:07:39 AST
Begin processing the 52nd record. run: 1429 subRun: 1 event: 71352 at 26-Nov-2025 07:07:47 AST
Begin processing the 53rd record. run: 1429 subRun: 1 event: 71353 at 26-Nov-2025 07:07:58 AST
PandoraContentApi::GetList(*this, listname, pCaloHitList) return STATUS_CODE_NOT_INITIALIZED
    in function: Infer
    in file:     /exp/dune/app/users/imawby/dunesw_splitting/srcs/larpandoracontent/larpandoradlcontent/LArVertex/DlVertexingAlgorithm.cc line#: 192
iter->second->Run() throw STATUS_CODE_NOT_INITIALIZED
    in function: RunAlgorithm
    in file:     /scratch/workspace/build-larbase/BUILDTYPE/prof/QUAL/s131-e26/label1/swarm/label2/SLF7/build/pandora/v03_16_00l/src/pandora-v03-16-00/PandoraSDK-v03-04-01/src/Api/PandoraContentApiImpl.cc line#: 235
Failure in algorithm Alg0002, LArDLVertexing, STATUS_CODE_NOT_INITIALIZED
DLVertexing: Input vertex list is empty! Can't perform pass 2
PandoraContentApi::GetList(*this, listname, pCaloHitList) return STATUS_CODE_NOT_INITIALIZED
    in function: Infer
    in file:     /exp/dune/app/users/imawby/dunesw_splitting/srcs/larpandoracontent/larpandoradlcontent/LArVertex/DlSecondaryVertexingAlgorithm.cc line#: 186
iter->second->Run() throw STATUS_CODE_NOT_INITIALIZED
    in function: RunAlgorithm
    in file:     /scratch/workspace/build-larbase/BUILDTYPE/prof/QUAL/s131-e26/label1/swarm/label2/SLF7/build/pandora/v03_16_00l/src/pandora-v03-16-00/PandoraSDK-v03-04-01/src/Api/PandoraContentApiImpl.cc line#: 235
Failure in algorithm Alg0004, LArDLSecondaryVertexing, STATUS_CODE_NOT_INITIALIZED
PandoraContentApi::GetList(*this, m_caloHitListNameU, m_pCaloHitListU) return STATUS_CODE_NOT_INITIALIZED
    in function: GetLists
    in file:     /exp/dune/app/users/imawby/dunesw_splitting/srcs/larpandoracontent/larpandoradlcontent/LArTwoDReco/DLThreeDClusterSplittingAlgorithm.cc line#: 286
Begin processing the 54th record. run: 1429 subRun: 1 event: 71354 at 26-Nov-2025 07:08:00 AST
Begin processing the 55th record. run: 1429 subRun: 1 event: 71355 at 26-Nov-2025 07:08:07 AST
=== End last 100 lines of lar log file ===
mv: cannot stat 'ClusterValidation_WithAlg.root': No such file or directory
mv: cannot stat 'ClusterValidation_WithoutAlg.root': No such file or directory
justIN time: 2026-02-04 04:53:19 UTC       justIN version: 01.06.00