justIN           Dashboard       Workflows       Jobs       AWT       Sites       Storages       Docs       Login

Jobsub ID 253259.101@dunegpschedd02.fnal.gov

Jobsub ID253259.101@dunegpschedd02.fnal.gov
Workflow ID10817
Stage ID1
User nameimawby@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes1048576000 (1000 MiB)
Wall seconds limit7200 (2 hours)
Submitted time2025-11-26 18:47:08
SiteES_CIEMAT
EntryDUNE_T2_ES_CIEMAT_condorce2
Last heartbeat2025-11-26 18:50:20
From worker nodeHostnamegaew0218.ciemat.es
cpuinfoIntel(R) Xeon(R) Gold 5218 CPU @ 2.30GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes1048576000 (1000 MiB)
Wall seconds limit232200 (64 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-11-26 18:48:54
Input filesfardet-hd:nu_dune10kt_1x2x6_1410_698_20230826T123358Z_gen_g4_detsim_hitreco__20240229T184813Z_reco2.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-11-26 18:50:20
Saved logsjustin-logs:253259.101-dunegpschedd02.fnal.gov.logs.tgz
List job events     (HTCondor job logs unavailable)

Jobscript log (last 10,000 characters)

---------------------------------------------
Input PFN = root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/fardet-hd/71/cb/nu_dune10kt_1x2x6_1410_698_20230826T123358Z_gen_g4_detsim_hitreco__20240229T184813Z_reco2.root
../justin-jobscript: line 64:  1305 Segmentation fault      (core dumped) lar -c $FCL_FILE $events_option "$pfn" > ${fname}_reco_${now}.log 2>&1
lar exit code 139
=== Start last 100 lines of lar log file ===
Error: Unsupported GDML Tag Used :gdml_simple_extension. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :extension. Please Check Geometry/Schema.
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1149
Info in <TGeoManager::CloseGeometry>: 67545 nodes/ 5439 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
GeoApaChannelGroupService::ctor: Group 0 (apa00) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 1 (apa01) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 2 (apa02) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 3 (apa03) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 4 (apa04) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 5 (apa05) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 6 (apa06) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 7 (apa07) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 8 (apa08) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 9 (apa09) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 10 (apa10) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 11 (apa11) has 2560 channels from 4/4 readout planes.
DuneToolManager::fclFilename: Taking fcl name from command line: lar -c /cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/kalmanAlg.fcl -n 100 root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/fardet-hd/71/cb/nu_dune10kt_1x2x6_1410_698_20230826T123358Z_gen_g4_detsim_hitreco__20240229T184813Z_reco2.root
AcdDigitReader::ctor:     LogLevel: 1
DuneToolManager::getPrivate: ERROR: Tool name is blank
StandardRawDigitExtractService::ctor: Retrieved digit read tool digitReader
StandardRawDigitExtractService::ctor: StandardRawDigitExtractService:
StandardRawDigitExtractService::ctor:         LogLevel: 1
StandardRawDigitExtractService::ctor:    DigitReadTool: digitReader
StandardRawDigitExtractService::ctor:   PedestalOption: 1
StandardRawDigitExtractService::ctor:     FlagStuckOff: 0
StandardRawDigitExtractService::ctor:      FlagStuckOn: 0
StandardRawDigitPrepService::ctor: Fetching extract service.
StandardRawDigitPrepService::ctor: Fetching channel status provider.
StandardRawDigitPrepService::ctor:   Channel status provider: @0xc5ad7e0
StandardRawDigitPrepService::ctor:   Extract service: @0xdf132b0
StandardRawDigitPrepService::ctor: Fetching deconvolution service.
StandardRawDigitPrepService::ctor:   Deconvolution service: @0xc0129d0
StandardRawDigitPrepService::ctor: Fetching ROI building service.
StandardRawDigitPrepService::ctor:   ROI building service: @0xc011bd0
StandardRawDigitPrepService::ctor: Fetching wire building service.
StandardRawDigitPrepService::ctor:   Wire building service: @0xc0129a0
StandardRawDigitPrepService::ctor: StandardRawDigitPrepService:
StandardRawDigitPrepService::ctor:              LogLevel: 1
StandardRawDigitPrepService::ctor:               SkipBad: 1
StandardRawDigitPrepService::ctor:             SkipNoisy: 0
StandardRawDigitPrepService::ctor:   ChannelStatusOnline: 0
StandardRawDigitPrepService::ctor:          DoMitigation: 0
StandardRawDigitPrepService::ctor:  DoEarlySignalFinding: 0
StandardRawDigitPrepService::ctor:        DoNoiseRemoval: 0
StandardRawDigitPrepService::ctor:       DoDeconvolution: 1
StandardRawDigitPrepService::ctor:  DoPedestalAdjustment: 0
StandardRawDigitPrepService::ctor:                 DoROI: 1
StandardRawDigitPrepService::ctor:               DoWires: 1
StandardRawDigitPrepService::ctor:                DoDump: 0
StandardRawDigitPrepService::ctor:  DoIntermediateStates: 0
StandardRawDigitPrepService::ctor: No display tools.
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
26-Nov-2025 19:49:39 CET  Initiating request to open input file "root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/fardet-hd/71/cb/nu_dune10kt_1x2x6_1410_698_20230826T123358Z_gen_g4_detsim_hitreco__20240229T184813Z_reco2.root"
26-Nov-2025 19:49:42 CET  Opened input file "root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/fardet-hd/71/cb/nu_dune10kt_1x2x6_1410_698_20230826T123358Z_gen_g4_detsim_hitreco__20240229T184813Z_reco2.root"
Begin processing the 1st record. run: 1410 subRun: 1 event: 69801 at 26-Nov-2025 19:49:44 CET
---MC-PARTICLE-MONITORING-----------------------------------------------------------------------

BeamNeutrinos: 

--Primary 0, MCPDG 211, Energy 0.762523, Dist. 16.0178, nMCHits 809 (275, 241, 293)
MCPDG 211, Energy 0.762523, Dist. 16.0178, nMCHits 68 (20, 26, 22)
\_ MCPDG 211, Energy 0.619922, Dist. 116.999, nMCHits 633 (210, 187, 236)
   \_ MCPDG 2212, Energy 1.14663, Dist. 27.8323, nMCHits 107 (45, 27, 35)
   \_ MCPDG 2212, Energy 0.956068, Dist. 0.368495, nMCHits 1 (0, 1, 0)
------------------------------------------------------------------------------------------------
PandoraMonitoring, only able to use default TApplication (limited functionality).
PandoraMonitoring::InitializeEve(): DISPLAY environment not set
PandoraMonitoring::InitializeEve(): Caught TEveException: TEveManager::Create ROOT is running in batch mode.
PandoraMonitoring::InitializeEve(): Attempt to release ROOT from batch mode.
Failure in algorithm Alg0003, LArVisualParticleMonitoring, unknown exception
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_Vertex_DUNEFD_HD_Accel_1_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_Vertex_DUNEFD_HD_Accel_1_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_Vertex_DUNEFD_HD_Accel_1_W_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_Vertex_DUNEFD_HD_Accel_2_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_Vertex_DUNEFD_HD_Accel_2_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_Vertex_DUNEFD_HD_Accel_2_W_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_U_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_V_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_W_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/WindowModel_U.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/SplitPosModel_U.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_Hierarchy_DUNEFD_HD_T_Edge_v014_15_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_Hierarchy_DUNEFD_HD_T_Class_v014_15_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_Hierarchy_DUNEFD_HD_S_Class_v014_15_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_Hierarchy_DUNEFD_HD_TT_Edge_v014_15_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_Hierarchy_DUNEFD_HD_TT_Class_v014_15_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_Hierarchy_DUNEFD_HD_TS_Edge_v014_15_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/2401d7e66a71c813bf259d2986daa79e4279f869/PandoraNet_Hierarchy_DUNEFD_HD_TS_Class_v014_15_00.pt'
PandoraMonitoring, only able to use default TApplication (limited functionality).
PandoraMonitoring::InitializeEve(): DISPLAY environment not set
=== End last 100 lines of lar log file ===
mv: cannot stat 'ClusterValidation_WithAlg.root': No such file or directory
mv: cannot stat 'ClusterValidation_WithoutAlg.root': No such file or directory
justIN time: 2025-12-19 04:00:54 UTC       justIN version: 01.05.03