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Jobsub ID 258334.18@dunegpschedd01.fnal.gov

Jobsub ID258334.18@dunegpschedd01.fnal.gov
Workflow ID10765
Stage ID1
User namehiguera@fnal.gov
RequestedProcessors1
GPUNo
RSS bytes4194304000 (4000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-11-26 04:55:05
SiteBR_CBPF
EntryDUNE_BR_CBPF_ce04
Last heartbeat2025-11-26 08:52:12
From worker nodeHostnamewn121.cat.cbpf.br
cpuinfoAMD EPYC 7713P 64-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit257400 (71 hours)
GPU
Inner Apptainer?True
Job stateoutputting_failed
Started2025-11-26 04:56:36
Input fileshd-protodune:pdhd_prod_beam__238386_50_1_20251106T072853Z_gen_g4_IonScintPDExt.root_255412_191_1_20251122T175422Z_PDInt.root
JobscriptExit code0
Real time3h (13879s)
CPU time2h (9274s = 66%)
Max RSS bytes4259205120 (4061 MiB)
Outputting started2025-11-26 08:47:57
Output files
Finished2025-11-26 08:52:12
List job events     (HTCondor job logs unavailable)

Jobscript log (last 10,000 characters)

races tagged "wiener"
FrameSaver: q=3.63187e+06 n=1496036 tag=wiener
0 X, 0 U, 0 V bad channels
Finding XUV coincidences...
C:0 T:0 20571 XUs and 15154 XVs -> 202 XUVs
C:0 T:1 111057 XUs and 75928 XVs -> 2739 XUVs
C:0 T:2 35342 XUs and 35113 XVs -> 991 XUVs
C:0 T:4 31 XUs and 12 XVs -> 0 XUVs
C:0 T:5 49925 XUs and 52947 XVs -> 652 XUVs
C:0 T:6 20012 XUs and 21012 XVs -> 584 XUVs
5168 XUVs total
3254 collection wire objects
5168 potential space points
Neighbour search...
116242 tests to find 51412 neighbours
Iterating with no regularization...
Begin: 4.81674e+07
0 4.58512e+07
1 4.57138e+07
2 4.57057e+07
Now with regularization...
Begin: 4.38186e+07
0 4.38133e+07
BdtBeamParticleIdTool::SliceFeatures::GetLeadingCaloHits - empty calo hit list
26-Nov-2025 05:47:47 -03  Closed output file "pdhd_prod_beam__gen_g4_IonScintPDExt_PDInt_258334_18_1_20251126T045643Z_detsim_reco1.root"
26-Nov-2025 05:47:47 -03  Closed input file "temp_detsim.root"

======================================================================================================================================
TimeTracker printout (sec)                              Min           Avg           Max         Median          RMS         nEvts   
======================================================================================================================================
Full event                                            178.726       257.787       427.407       239.699       70.5554        10     
--------------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                              0.00150656     0.0110376     0.0199374     0.0108064    0.00581724       10     
reco:opdec:Deconvolution                              1.07041       1.42651       1.8227        1.47381      0.219505        10     
reco:ophitspe:OpHitFinderDeco                        0.179593      0.304502       0.3454       0.314538      0.0443156       10     
reco:opflash:OpFlashFinder                           0.0911914      0.16093      0.248943      0.154301      0.0465535       10     
reco:opslicer:OpSlicer                               0.329147       0.45562       0.65779      0.476057      0.0928933       10     
reco:wclsdatahd:WireCellToolkit                       66.0468       74.3816       79.5934       73.5559       4.1227         10     
reco:gaushit:GausHitFinder                            1.03709       1.62881       2.34095       1.63952      0.352804        10     
reco:nhitsfilter:NumberOfHitsFilter                 0.000422477   0.000659352   0.000907846   0.000672601   0.000142112      10     
reco:reco3d:SpacePointSolver                         0.660126       1.73063       4.12185       1.30791       1.0776         10     
reco:hitpdune:DisambigFromSpacePoints                0.426218       1.58616       3.52113       1.49186      0.814892        10     
reco:pandora:StandardPandora                          23.1305       52.8531       112.58        44.2043       27.9173        10     
reco:pandoraWriter:StandardPandora                   0.329641      0.475319      0.779895      0.425926      0.147619        10     
reco:pandoraTrack:LArPandoraTrackCreation             1.96083       3.83608       6.68186       3.58264       1.37919        10     
reco:pandoraShower:LArPandoraShowerCreation           2.06339       4.34102       10.4371       4.28639       2.36081        10     
reco:pandoracalo:Calorimetry                          1.11568       2.24771       4.14122       1.91219      0.923433        10     
reco:pandoracalonosce:Calorimetry                    0.864196       2.13469       3.69698       1.87208       0.85775        10     
reco:pandoraShowercalo:ShowerCalorimetry              1.81136       4.54965       11.0841       3.90375       2.63508        10     
reco:pandoraShowercalonosce:ShowerCalorimetry         1.93236       4.28542       10.4079       3.7537        2.40361        10     
reco:pandoraGnocchiCalo:GnocchiCalorimetry           0.0866115     0.116012      0.170537      0.115702      0.0240866       10     
reco:pandoraGnocchiCalonosce:GnocchiCalorimetry      0.0867149     0.117222      0.171655      0.116203      0.0224161       10     
reco:emtrkmichelid:EmTrackMichelId                    47.0682       62.0052       102.672       55.9411       16.7092        10     
reco:crttag:SingleCRTMatchingProducer               0.00743724     0.0120923     0.0155802     0.0127055    0.00269006       10     
reco:crtreco:TwoCRTMatchingProducer                 0.00649273    0.00964242     0.0132689    0.00924068    0.00202639       10     
reco:pandora2Track:LArPandoraTrackCreation            5.21155       10.9908       21.8928       10.4066       5.49495        10     
reco:pandora2calo:ShowerCalorimetry                   1.58095       4.01316       9.10918       3.58401       2.28511        10     
reco:pandora2calonosce:ShowerCalorimetry               1.604        3.93827       8.86341       3.47409       2.27269        10     
reco:pandora2GnocchiCalo:GnocchiCalorimetry          0.0510541     0.107891       0.16347      0.110882      0.0296781       10     
reco:pandora2GnocchiCalonosce:GnocchiCalorimetry      0.05193      0.108637      0.162828      0.116042      0.0291609       10     
reco:pandora2Shower:LArPandoraShowerCreation          1.66507       4.6408        9.36627       4.45402       2.46008        10     
reco:pandora2Showercalo:ShowerCalorimetry             1.69228       5.3478        11.0444       3.79768       3.12831        10     
reco:pandora2Showercalonosce:ShowerCalorimetry        1.8617        5.24969       10.9491       3.33978       3.23494        10     
[art]:TriggerResults:TriggerResultInserter          2.1661e-05    6.74287e-05   0.000395456   3.31265e-05   0.000109436      10     
end_path:out1:RootOutput                             4.85e-06     2.57641e-05   0.000196908   5.8105e-06    5.71412e-05      10     
end_path:out1:RootOutput(write)                       3.44907       4.5383        6.42486       4.18422      0.958836        10     
======================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 6289.42 MB
  Peak resident set size usage (VmHWM): 3920.27 MB
  Details saved in: 'mem.db'
====================================================================================================
Art has completed and will exit with status 0.
Reco returns 0
Traceback (most recent call last):
  File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v10_10_04d00/bin/extractor_prod.py", line 434, in <module>
    main()
  File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v10_10_04d00/bin/extractor_prod.py", line 379, in main
    arbjson = json.load(injson)
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/json/__init__.py", line 293, in load
    return loads(fp.read(),
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/json/__init__.py", line 346, in loads
    return _default_decoder.decode(s)
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/json/decoder.py", line 337, in decode
    obj, end = self.raw_decode(s, idx=_w(s, 0).end())
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/json/decoder.py", line 353, in raw_decode
    obj, end = self.scan_once(s, idx)
json.decoder.JSONDecodeError: Expecting ',' delimiter: line 12 column 1 (char 454)
Error reading metadata from file: Expecting value: line 1 column 1 (char 0)
==== Start pdhd_prod_beam__gen_g4_IonScintPDExt_PDInt_258334_18_1_20251126T045643Z_detsim_reco1.root.ext.json ====
Error loading input json file.
==== End pdhd_prod_beam__gen_g4_IonScintPDExt_PDInt_258334_18_1_20251126T045643Z_detsim_reco1.root.ext.json ====
==== Start pdhd_prod_beam__gen_g4_IonScintPDExt_PDInt_258334_18_1_20251126T045643Z_detsim_reco1.root.json ====
==== End pdhd_prod_beam__gen_g4_IonScintPDExt_PDInt_258334_18_1_20251126T045643Z_detsim_reco1.root.json ====
==== Start pdhd_prod_beam__gen_g4_IonScintPDExt_PDInt_258334_18_1_20251126T045643Z_detsim_reco1.root.temp.json ====
==== End pdhd_prod_beam__gen_g4_IonScintPDExt_PDInt_258334_18_1_20251126T045643Z_detsim_reco1.root.temp.json ====
.:
total 6679708
-rw-r--r-- 1 nobody nobody      40704 Nov 26 05:47 jobscript.log
-rw-r--r-- 1 nobody nobody        204 Nov 26 05:47 justin-processed-pfns.txt
-rw-r--r-- 1 nobody nobody          0 Nov 26 05:47 pdhd_prod_beam__gen_g4_IonScintPDExt_PDInt_258334_18_1_20251126T045643Z_detsim_reco1.root.json
-rw-r--r-- 1 nobody nobody          0 Nov 26 05:47 pdhd_prod_beam__gen_g4_IonScintPDExt_PDInt_258334_18_1_20251126T045643Z_detsim_reco1.root.temp.json
-rw-r--r-- 1 nobody nobody         31 Nov 26 05:47 pdhd_prod_beam__gen_g4_IonScintPDExt_PDInt_258334_18_1_20251126T045643Z_detsim_reco1.root.ext.json
-rw-r--r-- 1 nobody nobody         25 Nov 26 05:47 all-input-dids.txt
-rw-r--r-- 1 nobody nobody        519 Nov 26 05:47 reco_protodunehd_hist.root
-rw-r--r-- 1 nobody nobody       3574 Nov 26 05:47 Pandora_Geometry.xml
-rw-r--r-- 1 nobody nobody     204800 Nov 26 05:47 mem.db
-rw-r--r-- 1 nobody nobody      36864 Nov 26 05:47 time.db
-rw-r--r-- 1 nobody nobody 6780670611 Nov 26 05:47 pdhd_prod_beam__gen_g4_IonScintPDExt_PDInt_258334_18_1_20251126T045643Z_detsim_reco1.root
-rw-r--r-- 1 nobody nobody   59039330 Nov 26 05:44 Pandora_Events.pndr
-rw-r--r-- 1 nobody nobody          0 Nov 26 05:06 ProtoDUNE.log
-rw-r--r-- 1 nobody nobody          0 Nov 26 05:01 debugprod.log
-rw-r--r-- 1 nobody nobody        519 Nov 26 05:01 detsim_single_protodunehd_hist.root
justIN time: 2026-02-04 10:22:48 UTC       justIN version: 01.06.00