Jobsub ID 258790.2@dunegpschedd01.fnal.gov
| Jobsub ID | 258790.2@dunegpschedd01.fnal.gov |
| Workflow ID | 10792 |
| Stage ID | 1 |
| User name | imawby@fnal.gov |
| HTCondor Group | group_dune |
| Requested | Processors | 1 |
| GPU | No |
| RSS bytes | 1048576000 (1000 MiB) |
| Wall seconds limit | 7200 (2 hours) |
| Submitted time | 2025-11-26 14:22:32 |
| Site | US_Michigan |
| Entry | HCC_US_Michigan_gate02 |
| Last heartbeat | 2025-11-26 14:27:35 |
| From worker node | Hostname | c7-9-14.aglt2.org |
| cpuinfo | AMD EPYC 9354 32-Core Processor |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 1048576000 (1000 MiB) |
| Wall seconds limit | 36000 (10 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | jobscript_error |
| Started | 2025-11-26 14:23:56 |
| Input files | fardet-hd:nu_dune10kt_1x2x6_1100_789_20230826T035508Z_gen_g4_detsim_hitreco__20240224T092927Z_reco2.root
|
| Jobscript | Exit code | 1 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Max RSS bytes | 0 (0 MiB) |
| Outputting started | |
| Output files | |
| Finished | 2025-11-26 14:27:35 |
| Saved logs | justin-logs:258790.2-dunegpschedd01.fnal.gov.logs.tgz |
| List job events Cached HTCondor job logs |
Jobscript log (last 10,000 characters)
--------------------------------------------------------
Input PFN = root://fndcadoor.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-hd/23/26/nu_dune10kt_1x2x6_1100_789_20230826T035508Z_gen_g4_detsim_hitreco__20240224T092927Z_reco2.root
../justin-jobscript: line 64: 1307 Segmentation fault (core dumped) lar -c $FCL_FILE $events_option "$pfn" > ${fname}_reco_${now}.log 2>&1
lar exit code 139
=== Start last 100 lines of lar log file ===
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1149
Info in <TGeoManager::CloseGeometry>: 67545 nodes/ 5439 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
GeoApaChannelGroupService::ctor: Group 0 (apa00) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 1 (apa01) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 2 (apa02) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 3 (apa03) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 4 (apa04) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 5 (apa05) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 6 (apa06) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 7 (apa07) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 8 (apa08) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 9 (apa09) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 10 (apa10) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 11 (apa11) has 2560 channels from 4/4 readout planes.
DuneToolManager::fclFilename: Taking fcl name from command line: lar -c /cvmfs/fifeuser3.opensciencegrid.org/sw/dune/a0411fe586af02b8acadd6034a5179909d1beafe/kalmanTraining.fcl -n 100 root://fndcadoor.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-hd/23/26/nu_dune10kt_1x2x6_1100_789_20230826T035508Z_gen_g4_detsim_hitreco__20240224T092927Z_reco2.root
AcdDigitReader::ctor: LogLevel: 1
DuneToolManager::getPrivate: ERROR: Tool name is blank
StandardRawDigitExtractService::ctor: Retrieved digit read tool digitReader
StandardRawDigitExtractService::ctor: StandardRawDigitExtractService:
StandardRawDigitExtractService::ctor: LogLevel: 1
StandardRawDigitExtractService::ctor: DigitReadTool: digitReader
StandardRawDigitExtractService::ctor: PedestalOption: 1
StandardRawDigitExtractService::ctor: FlagStuckOff: 0
StandardRawDigitExtractService::ctor: FlagStuckOn: 0
StandardRawDigitPrepService::ctor: Fetching extract service.
StandardRawDigitPrepService::ctor: Fetching channel status provider.
StandardRawDigitPrepService::ctor: Channel status provider: @0xca91d90
StandardRawDigitPrepService::ctor: Extract service: @0xe3d0fc0
StandardRawDigitPrepService::ctor: Fetching deconvolution service.
StandardRawDigitPrepService::ctor: Deconvolution service: @0xc4f4c40
StandardRawDigitPrepService::ctor: Fetching ROI building service.
StandardRawDigitPrepService::ctor: ROI building service: @0x5110790
StandardRawDigitPrepService::ctor: Fetching wire building service.
StandardRawDigitPrepService::ctor: Wire building service: @0x5110760
StandardRawDigitPrepService::ctor: StandardRawDigitPrepService:
StandardRawDigitPrepService::ctor: LogLevel: 1
StandardRawDigitPrepService::ctor: SkipBad: 1
StandardRawDigitPrepService::ctor: SkipNoisy: 0
StandardRawDigitPrepService::ctor: ChannelStatusOnline: 0
StandardRawDigitPrepService::ctor: DoMitigation: 0
StandardRawDigitPrepService::ctor: DoEarlySignalFinding: 0
StandardRawDigitPrepService::ctor: DoNoiseRemoval: 0
StandardRawDigitPrepService::ctor: DoDeconvolution: 1
StandardRawDigitPrepService::ctor: DoPedestalAdjustment: 0
StandardRawDigitPrepService::ctor: DoROI: 1
StandardRawDigitPrepService::ctor: DoWires: 1
StandardRawDigitPrepService::ctor: DoDump: 0
StandardRawDigitPrepService::ctor: DoIntermediateStates: 0
StandardRawDigitPrepService::ctor: No display tools.
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
26-Nov-2025 09:24:34 EST Initiating request to open input file "root://fndcadoor.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-hd/23/26/nu_dune10kt_1x2x6_1100_789_20230826T035508Z_gen_g4_detsim_hitreco__20240224T092927Z_reco2.root"
26-Nov-2025 09:24:36 EST Opened input file "root://fndcadoor.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-hd/23/26/nu_dune10kt_1x2x6_1100_789_20230826T035508Z_gen_g4_detsim_hitreco__20240224T092927Z_reco2.root"
Begin processing the 1st record. run: 1100 subRun: 1 event: 78901 at 26-Nov-2025 09:24:37 EST
Loaded the TorchScript model '/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/a0411fe586af02b8acadd6034a5179909d1beafe/PandoraNet_Vertex_DUNEFD_HD_Accel_1_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/a0411fe586af02b8acadd6034a5179909d1beafe/PandoraNet_Vertex_DUNEFD_HD_Accel_1_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/a0411fe586af02b8acadd6034a5179909d1beafe/PandoraNet_Vertex_DUNEFD_HD_Accel_1_W_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/a0411fe586af02b8acadd6034a5179909d1beafe/PandoraNet_Vertex_DUNEFD_HD_Accel_2_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/a0411fe586af02b8acadd6034a5179909d1beafe/PandoraNet_Vertex_DUNEFD_HD_Accel_2_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/a0411fe586af02b8acadd6034a5179909d1beafe/PandoraNet_Vertex_DUNEFD_HD_Accel_2_W_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/a0411fe586af02b8acadd6034a5179909d1beafe/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_U_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/a0411fe586af02b8acadd6034a5179909d1beafe/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_V_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/a0411fe586af02b8acadd6034a5179909d1beafe/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_W_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/a0411fe586af02b8acadd6034a5179909d1beafe/WindowModel_U.pt'
Loaded the TorchScript model '/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/a0411fe586af02b8acadd6034a5179909d1beafe/SplitPosModel_U.pt'
26-Nov-2025 09:24:40 EST Opened output file with pattern "%ifb_reco2.root"
Begin processing the 2nd record. run: 1100 subRun: 1 event: 78902 at 26-Nov-2025 09:25:35 EST
PandoraMonitoring, only able to use default TApplication (limited functionality).
Begin processing the 3rd record. run: 1100 subRun: 1 event: 78903 at 26-Nov-2025 09:25:38 EST
Begin processing the 4th record. run: 1100 subRun: 1 event: 78904 at 26-Nov-2025 09:25:44 EST
Begin processing the 5th record. run: 1100 subRun: 1 event: 78905 at 26-Nov-2025 09:25:46 EST
Begin processing the 6th record. run: 1100 subRun: 1 event: 78906 at 26-Nov-2025 09:25:49 EST
Begin processing the 7th record. run: 1100 subRun: 1 event: 78907 at 26-Nov-2025 09:25:51 EST
Begin processing the 8th record. run: 1100 subRun: 1 event: 78908 at 26-Nov-2025 09:25:53 EST
Begin processing the 9th record. run: 1100 subRun: 1 event: 78909 at 26-Nov-2025 09:25:56 EST
Begin processing the 10th record. run: 1100 subRun: 1 event: 78910 at 26-Nov-2025 09:25:59 EST
Begin processing the 11th record. run: 1100 subRun: 1 event: 78911 at 26-Nov-2025 09:26:02 EST
Begin processing the 12th record. run: 1100 subRun: 1 event: 78912 at 26-Nov-2025 09:26:05 EST
Begin processing the 13th record. run: 1100 subRun: 1 event: 78913 at 26-Nov-2025 09:26:12 EST
Begin processing the 14th record. run: 1100 subRun: 1 event: 78914 at 26-Nov-2025 09:26:19 EST
Begin processing the 15th record. run: 1100 subRun: 1 event: 78915 at 26-Nov-2025 09:26:26 EST
Begin processing the 16th record. run: 1100 subRun: 1 event: 78916 at 26-Nov-2025 09:26:36 EST
Begin processing the 17th record. run: 1100 subRun: 1 event: 78917 at 26-Nov-2025 09:26:38 EST
Begin processing the 18th record. run: 1100 subRun: 1 event: 78918 at 26-Nov-2025 09:26:41 EST
Begin processing the 19th record. run: 1100 subRun: 1 event: 78919 at 26-Nov-2025 09:26:44 EST
Begin processing the 20th record. run: 1100 subRun: 1 event: 78920 at 26-Nov-2025 09:26:46 EST
Begin processing the 21st record. run: 1100 subRun: 1 event: 78921 at 26-Nov-2025 09:26:50 EST
Begin processing the 22nd record. run: 1100 subRun: 1 event: 78922 at 26-Nov-2025 09:26:52 EST
Begin processing the 23rd record. run: 1100 subRun: 1 event: 78923 at 26-Nov-2025 09:26:56 EST
Begin processing the 24th record. run: 1100 subRun: 1 event: 78924 at 26-Nov-2025 09:26:58 EST
Begin processing the 25th record. run: 1100 subRun: 1 event: 78925 at 26-Nov-2025 09:27:01 EST
Begin processing the 26th record. run: 1100 subRun: 1 event: 78926 at 26-Nov-2025 09:27:03 EST
Begin processing the 27th record. run: 1100 subRun: 1 event: 78927 at 26-Nov-2025 09:27:07 EST
Begin processing the 28th record. run: 1100 subRun: 1 event: 78928 at 26-Nov-2025 09:27:09 EST
=== End last 100 lines of lar log file ===
mv: cannot stat 'ClusterSplittingTraining.root': No such file or directory 