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Jobsub ID 258822.1@dunegpschedd01.fnal.gov

Jobsub ID258822.1@dunegpschedd01.fnal.gov
Workflow ID10798
Stage ID1
User nameimawby@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes1048576000 (1000 MiB)
Wall seconds limit7200 (2 hours)
Submitted time2025-11-26 15:04:34
SiteUS_Michigan
EntryHCC_US_Michigan_gate02
Last heartbeat2025-11-26 15:08:37
From worker nodeHostnamec-212-15.aglt2.org
cpuinfoAMD EPYC 7443 24-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes1048576000 (1000 MiB)
Wall seconds limit36000 (10 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-11-26 15:05:14
Input filesfardet-hd:nu_dune10kt_1x2x6_1123_626_20230828T123850Z_gen_g4_detsim_hitreco__20240223T215248Z_reco2.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-11-26 15:08:37
Saved logsjustin-logs:258822.1-dunegpschedd01.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

/a71907bf758a259ca1ad4e72189d866e7fd40930/localProducts_larsoft_v10_08_00_e26_prof

PRODUCTS=/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/localProducts_larsoft_v10_08_00_e26_prof:/cvmfs/dune.opensciencegrid.org/products/dune:/cvmfs/larsoft.opensciencegrid.org/products:/cvmfs/larsoft.opensciencegrid.org/packages:/cvmfs/fermilab.opensciencegrid.org/products/common/db/
CETPKG_INSTALL=/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/localProducts_larsoft_v10_08_00_e26_prof

local product directory is /cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/localProducts_larsoft_v10_08_00_e26_prof
----------- this block should be empty ------------------
---------------------------------------------------------
Input PFN = root://fndcadoor.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-hd/11/7b/nu_dune10kt_1x2x6_1123_626_20230828T123850Z_gen_g4_detsim_hitreco__20240223T215248Z_reco2.root
../justin-jobscript: line 64:  1310 Segmentation fault      (core dumped) lar -c $FCL_FILE $events_option "$pfn" > ${fname}_reco_${now}.log 2>&1
lar exit code 139
=== Start last 100 lines of lar log file ===
  spsolve
  trajcluster
  trkshowersplit
  wclsmcnfsp
DuneDeconvolutionService::ctor: DuneDeconvolutionService:
DuneDeconvolutionService::ctor:                LogLevel: 1
DuneRoiBuildingService::ctor: DuneRoiBuildingService:
DuneRoiBuildingService::ctor:     LogLevel: 1
DuneRoiBuildingService::ctor:  NSigmaStart: 3
DuneRoiBuildingService::ctor:    NSigmaEnd: 1
DuneRoiBuildingService::ctor:       PadLow: 50
DuneRoiBuildingService::ctor:      PadHigh: 50
StandardAdcWireBuildingService::ctor: StandardAdcWireBuildingService:
StandardAdcWireBuildingService::ctor:     LogLevel: 1
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_08_00d00/gdml/dune10kt_v6_refactored_1x2x6.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Error: Unsupported GDML Tag Used :gdml_simple_extension. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :extension. Please Check Geometry/Schema.
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1149
Info in <TGeoManager::CloseGeometry>: 67545 nodes/ 5439 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
GeoApaChannelGroupService::ctor: Group 0 (apa00) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 1 (apa01) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 2 (apa02) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 3 (apa03) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 4 (apa04) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 5 (apa05) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 6 (apa06) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 7 (apa07) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 8 (apa08) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 9 (apa09) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 10 (apa10) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 11 (apa11) has 2560 channels from 4/4 readout planes.
DuneToolManager::fclFilename: Taking fcl name from command line: lar -c /cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/kalmanTraining.fcl -n 100 root://fndcadoor.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-hd/11/7b/nu_dune10kt_1x2x6_1123_626_20230828T123850Z_gen_g4_detsim_hitreco__20240223T215248Z_reco2.root
AcdDigitReader::ctor:     LogLevel: 1
DuneToolManager::getPrivate: ERROR: Tool name is blank
StandardRawDigitExtractService::ctor: Retrieved digit read tool digitReader
StandardRawDigitExtractService::ctor: StandardRawDigitExtractService:
StandardRawDigitExtractService::ctor:         LogLevel: 1
StandardRawDigitExtractService::ctor:    DigitReadTool: digitReader
StandardRawDigitExtractService::ctor:   PedestalOption: 1
StandardRawDigitExtractService::ctor:     FlagStuckOff: 0
StandardRawDigitExtractService::ctor:      FlagStuckOn: 0
StandardRawDigitPrepService::ctor: Fetching extract service.
StandardRawDigitPrepService::ctor: Fetching channel status provider.
StandardRawDigitPrepService::ctor:   Channel status provider: @0xbc09760
StandardRawDigitPrepService::ctor:   Extract service: @0xbc8df50
StandardRawDigitPrepService::ctor: Fetching deconvolution service.
StandardRawDigitPrepService::ctor:   Deconvolution service: @0xb66c2b0
StandardRawDigitPrepService::ctor: Fetching ROI building service.
StandardRawDigitPrepService::ctor:   ROI building service: @0xb66c460
StandardRawDigitPrepService::ctor: Fetching wire building service.
StandardRawDigitPrepService::ctor:   Wire building service: @0xb66c280
StandardRawDigitPrepService::ctor: StandardRawDigitPrepService:
StandardRawDigitPrepService::ctor:              LogLevel: 1
StandardRawDigitPrepService::ctor:               SkipBad: 1
StandardRawDigitPrepService::ctor:             SkipNoisy: 0
StandardRawDigitPrepService::ctor:   ChannelStatusOnline: 0
StandardRawDigitPrepService::ctor:          DoMitigation: 0
StandardRawDigitPrepService::ctor:  DoEarlySignalFinding: 0
StandardRawDigitPrepService::ctor:        DoNoiseRemoval: 0
StandardRawDigitPrepService::ctor:       DoDeconvolution: 1
StandardRawDigitPrepService::ctor:  DoPedestalAdjustment: 0
StandardRawDigitPrepService::ctor:                 DoROI: 1
StandardRawDigitPrepService::ctor:               DoWires: 1
StandardRawDigitPrepService::ctor:                DoDump: 0
StandardRawDigitPrepService::ctor:  DoIntermediateStates: 0
StandardRawDigitPrepService::ctor: No display tools.
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
26-Nov-2025 10:06:25 EST  Initiating request to open input file "root://fndcadoor.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-hd/11/7b/nu_dune10kt_1x2x6_1123_626_20230828T123850Z_gen_g4_detsim_hitreco__20240223T215248Z_reco2.root"
26-Nov-2025 10:06:28 EST  Opened input file "root://fndcadoor.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-hd/11/7b/nu_dune10kt_1x2x6_1123_626_20230828T123850Z_gen_g4_detsim_hitreco__20240223T215248Z_reco2.root"
Begin processing the 1st record. run: 1123 subRun: 1 event: 62601 at 26-Nov-2025 10:06:30 EST
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_Vertex_DUNEFD_HD_Accel_1_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_Vertex_DUNEFD_HD_Accel_1_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_Vertex_DUNEFD_HD_Accel_1_W_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_Vertex_DUNEFD_HD_Accel_2_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_Vertex_DUNEFD_HD_Accel_2_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_Vertex_DUNEFD_HD_Accel_2_W_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_U_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_V_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_W_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/WindowModel_U.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/SplitPosModel_U.pt'
PandoraMonitoring, only able to use default TApplication (limited functionality).
26-Nov-2025 10:06:36 EST  Opened output file with pattern "%ifb_reco2.root"
Begin processing the 2nd record. run: 1123 subRun: 1 event: 62602 at 26-Nov-2025 10:07:33 EST
Begin processing the 3rd record. run: 1123 subRun: 1 event: 62603 at 26-Nov-2025 10:07:37 EST
Begin processing the 4th record. run: 1123 subRun: 1 event: 62604 at 26-Nov-2025 10:07:41 EST
Begin processing the 5th record. run: 1123 subRun: 1 event: 62605 at 26-Nov-2025 10:07:45 EST
Begin processing the 6th record. run: 1123 subRun: 1 event: 62606 at 26-Nov-2025 10:07:48 EST
Begin processing the 7th record. run: 1123 subRun: 1 event: 62607 at 26-Nov-2025 10:07:51 EST
=== End last 100 lines of lar log file ===
mv: cannot stat 'ClusterSplittingTraining.root': No such file or directory
justIN time: 2025-12-19 12:14:25 UTC       justIN version: 01.05.03