Jobsub ID 258823.1@dunegpschedd01.fnal.gov
Jobscript log (last 10,000 characters)
/a71907bf758a259ca1ad4e72189d866e7fd40930/localProducts_larsoft_v10_08_00_e26_prof
PRODUCTS=/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/localProducts_larsoft_v10_08_00_e26_prof:/cvmfs/dune.opensciencegrid.org/products/dune:/cvmfs/larsoft.opensciencegrid.org/products:/cvmfs/larsoft.opensciencegrid.org/packages:/cvmfs/fermilab.opensciencegrid.org/products/common/db/
CETPKG_INSTALL=/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/localProducts_larsoft_v10_08_00_e26_prof
local product directory is /cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/localProducts_larsoft_v10_08_00_e26_prof
----------- this block should be empty ------------------
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Input PFN = root://fndcadoor.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-hd/11/7b/nu_dune10kt_1x2x6_1123_626_20230828T123850Z_gen_g4_detsim_hitreco__20240223T215248Z_reco2.root
../justin-jobscript: line 64: 1314 Segmentation fault (core dumped) lar -c $FCL_FILE $events_option "$pfn" > ${fname}_reco_${now}.log 2>&1
lar exit code 139
=== Start last 100 lines of lar log file ===
spsolve
trajcluster
trkshowersplit
wclsmcnfsp
DuneDeconvolutionService::ctor: DuneDeconvolutionService:
DuneDeconvolutionService::ctor: LogLevel: 1
DuneRoiBuildingService::ctor: DuneRoiBuildingService:
DuneRoiBuildingService::ctor: LogLevel: 1
DuneRoiBuildingService::ctor: NSigmaStart: 3
DuneRoiBuildingService::ctor: NSigmaEnd: 1
DuneRoiBuildingService::ctor: PadLow: 50
DuneRoiBuildingService::ctor: PadHigh: 50
StandardAdcWireBuildingService::ctor: StandardAdcWireBuildingService:
StandardAdcWireBuildingService::ctor: LogLevel: 1
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_08_00d00/gdml/dune10kt_v6_refactored_1x2x6.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Error: Unsupported GDML Tag Used :gdml_simple_extension. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :extension. Please Check Geometry/Schema.
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1149
Info in <TGeoManager::CloseGeometry>: 67545 nodes/ 5439 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
GeoApaChannelGroupService::ctor: Group 0 (apa00) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 1 (apa01) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 2 (apa02) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 3 (apa03) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 4 (apa04) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 5 (apa05) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 6 (apa06) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 7 (apa07) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 8 (apa08) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 9 (apa09) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 10 (apa10) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 11 (apa11) has 2560 channels from 4/4 readout planes.
DuneToolManager::fclFilename: Taking fcl name from command line: lar -c /cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/kalmanTraining.fcl -n 100 root://fndcadoor.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-hd/11/7b/nu_dune10kt_1x2x6_1123_626_20230828T123850Z_gen_g4_detsim_hitreco__20240223T215248Z_reco2.root
AcdDigitReader::ctor: LogLevel: 1
DuneToolManager::getPrivate: ERROR: Tool name is blank
StandardRawDigitExtractService::ctor: Retrieved digit read tool digitReader
StandardRawDigitExtractService::ctor: StandardRawDigitExtractService:
StandardRawDigitExtractService::ctor: LogLevel: 1
StandardRawDigitExtractService::ctor: DigitReadTool: digitReader
StandardRawDigitExtractService::ctor: PedestalOption: 1
StandardRawDigitExtractService::ctor: FlagStuckOff: 0
StandardRawDigitExtractService::ctor: FlagStuckOn: 0
StandardRawDigitPrepService::ctor: Fetching extract service.
StandardRawDigitPrepService::ctor: Fetching channel status provider.
StandardRawDigitPrepService::ctor: Channel status provider: @0xaed6860
StandardRawDigitPrepService::ctor: Extract service: @0x4ee1e30
StandardRawDigitPrepService::ctor: Fetching deconvolution service.
StandardRawDigitPrepService::ctor: Deconvolution service: @0x5873d50
StandardRawDigitPrepService::ctor: Fetching ROI building service.
StandardRawDigitPrepService::ctor: ROI building service: @0xa93c3f0
StandardRawDigitPrepService::ctor: Fetching wire building service.
StandardRawDigitPrepService::ctor: Wire building service: @0x364ae90
StandardRawDigitPrepService::ctor: StandardRawDigitPrepService:
StandardRawDigitPrepService::ctor: LogLevel: 1
StandardRawDigitPrepService::ctor: SkipBad: 1
StandardRawDigitPrepService::ctor: SkipNoisy: 0
StandardRawDigitPrepService::ctor: ChannelStatusOnline: 0
StandardRawDigitPrepService::ctor: DoMitigation: 0
StandardRawDigitPrepService::ctor: DoEarlySignalFinding: 0
StandardRawDigitPrepService::ctor: DoNoiseRemoval: 0
StandardRawDigitPrepService::ctor: DoDeconvolution: 1
StandardRawDigitPrepService::ctor: DoPedestalAdjustment: 0
StandardRawDigitPrepService::ctor: DoROI: 1
StandardRawDigitPrepService::ctor: DoWires: 1
StandardRawDigitPrepService::ctor: DoDump: 0
StandardRawDigitPrepService::ctor: DoIntermediateStates: 0
StandardRawDigitPrepService::ctor: No display tools.
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
26-Nov-2025 09:11:41 CST Initiating request to open input file "root://fndcadoor.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-hd/11/7b/nu_dune10kt_1x2x6_1123_626_20230828T123850Z_gen_g4_detsim_hitreco__20240223T215248Z_reco2.root"
26-Nov-2025 09:11:43 CST Opened input file "root://fndcadoor.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-hd/11/7b/nu_dune10kt_1x2x6_1123_626_20230828T123850Z_gen_g4_detsim_hitreco__20240223T215248Z_reco2.root"
Begin processing the 1st record. run: 1123 subRun: 1 event: 62601 at 26-Nov-2025 09:11:45 CST
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_Vertex_DUNEFD_HD_Accel_1_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_Vertex_DUNEFD_HD_Accel_1_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_Vertex_DUNEFD_HD_Accel_1_W_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_Vertex_DUNEFD_HD_Accel_2_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_Vertex_DUNEFD_HD_Accel_2_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_Vertex_DUNEFD_HD_Accel_2_W_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_U_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_V_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_W_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/WindowModel_U.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a71907bf758a259ca1ad4e72189d866e7fd40930/SplitPosModel_U.pt'
PandoraMonitoring, only able to use default TApplication (limited functionality).
26-Nov-2025 09:11:49 CST Opened output file with pattern "%ifb_reco2.root"
Begin processing the 2nd record. run: 1123 subRun: 1 event: 62602 at 26-Nov-2025 09:14:27 CST
Begin processing the 3rd record. run: 1123 subRun: 1 event: 62603 at 26-Nov-2025 09:14:31 CST
Begin processing the 4th record. run: 1123 subRun: 1 event: 62604 at 26-Nov-2025 09:14:35 CST
Begin processing the 5th record. run: 1123 subRun: 1 event: 62605 at 26-Nov-2025 09:14:39 CST
Begin processing the 6th record. run: 1123 subRun: 1 event: 62606 at 26-Nov-2025 09:14:41 CST
Begin processing the 7th record. run: 1123 subRun: 1 event: 62607 at 26-Nov-2025 09:14:43 CST
=== End last 100 lines of lar log file ===
mv: cannot stat 'ClusterSplittingTraining.root': No such file or directory