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Jobsub ID 291840.13@dunegpschedd02.fnal.gov

Jobsub ID291840.13@dunegpschedd02.fnal.gov
Workflow ID12131
Stage ID1
User nameimawby@fnal.gov
RequestedProcessors1
GPUNo
RSS bytes1048576000 (1000 MiB)
Wall seconds limit7200 (2 hours)
Submitted time2026-01-21 02:52:15
SiteNL_SURFsara
EntryDUNE_SurfSARA_arc02
Last heartbeat2026-01-21 04:49:38
From worker nodeHostnamewn-db-04.gina.surf.nl
cpuinfoAMD EPYC 7702P 64-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes1048576000 (1000 MiB)
Wall seconds limit129600 (36 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2026-01-21 02:53:10
Input filesfardet-hd:nu_dune10kt_1x2x6_1111_894_20230827T034051Z_gen_g4_detsim_hitreco__20240229T175656Z_reco2.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2026-01-21 04:49:38
Saved logsjustin-logs:291840.13-dunegpschedd02.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

1094//dune/RSE/fardet-hd/5c/c7/nu_dune10kt_1x2x6_1111_894_20230827T034051Z_gen_g4_detsim_hitreco__20240229T175656Z_reco2.root
../justin-jobscript: line 64:  1306 Segmentation fault      (core dumped) lar -c $FCL_FILE $events_option "$pfn" > ${fname}_reco_${now}.log 2>&1
lar exit code 139
=== Start last 100 lines of lar log file ===
Error: Unsupported GDML Tag Used :extension. Please Check Geometry/Schema.
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1149
Info in <TGeoManager::CloseGeometry>: 67545 nodes/ 5439 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
GeoApaChannelGroupService::ctor: Group 0 (apa00) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 1 (apa01) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 2 (apa02) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 3 (apa03) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 4 (apa04) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 5 (apa05) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 6 (apa06) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 7 (apa07) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 8 (apa08) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 9 (apa09) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 10 (apa10) has 2560 channels from 4/4 readout planes.
GeoApaChannelGroupService::ctor: Group 11 (apa11) has 2560 channels from 4/4 readout planes.
DuneToolManager::fclFilename: Taking fcl name from command line: lar -c /cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/reco2.fcl -n 100 root://xrootd1.esc.qmul.ac.uk:1094//dune/RSE/fardet-hd/5c/c7/nu_dune10kt_1x2x6_1111_894_20230827T034051Z_gen_g4_detsim_hitreco__20240229T175656Z_reco2.root
AcdDigitReader::ctor:     LogLevel: 1
DuneToolManager::getPrivate: ERROR: Tool name is blank
StandardRawDigitExtractService::ctor: Retrieved digit read tool digitReader
StandardRawDigitExtractService::ctor: StandardRawDigitExtractService:
StandardRawDigitExtractService::ctor:         LogLevel: 1
StandardRawDigitExtractService::ctor:    DigitReadTool: digitReader
StandardRawDigitExtractService::ctor:   PedestalOption: 1
StandardRawDigitExtractService::ctor:     FlagStuckOff: 0
StandardRawDigitExtractService::ctor:      FlagStuckOn: 0
StandardRawDigitPrepService::ctor: Fetching extract service.
StandardRawDigitPrepService::ctor: Fetching channel status provider.
StandardRawDigitPrepService::ctor:   Channel status provider: @0xb342b50
StandardRawDigitPrepService::ctor:   Extract service: @0xcc99990
StandardRawDigitPrepService::ctor: Fetching deconvolution service.
StandardRawDigitPrepService::ctor:   Deconvolution service: @0xada8810
StandardRawDigitPrepService::ctor: Fetching ROI building service.
StandardRawDigitPrepService::ctor:   ROI building service: @0xada88a0
StandardRawDigitPrepService::ctor: Fetching wire building service.
StandardRawDigitPrepService::ctor:   Wire building service: @0x394f1e0
StandardRawDigitPrepService::ctor: StandardRawDigitPrepService:
StandardRawDigitPrepService::ctor:              LogLevel: 1
StandardRawDigitPrepService::ctor:               SkipBad: 1
StandardRawDigitPrepService::ctor:             SkipNoisy: 0
StandardRawDigitPrepService::ctor:   ChannelStatusOnline: 0
StandardRawDigitPrepService::ctor:          DoMitigation: 0
StandardRawDigitPrepService::ctor:  DoEarlySignalFinding: 0
StandardRawDigitPrepService::ctor:        DoNoiseRemoval: 0
StandardRawDigitPrepService::ctor:       DoDeconvolution: 1
StandardRawDigitPrepService::ctor:  DoPedestalAdjustment: 0
StandardRawDigitPrepService::ctor:                 DoROI: 1
StandardRawDigitPrepService::ctor:               DoWires: 1
StandardRawDigitPrepService::ctor:                DoDump: 0
StandardRawDigitPrepService::ctor:  DoIntermediateStates: 0
StandardRawDigitPrepService::ctor: No display tools.
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
21-Jan-2026 03:54:09 CET  Initiating request to open input file "root://xrootd1.esc.qmul.ac.uk:1094//dune/RSE/fardet-hd/5c/c7/nu_dune10kt_1x2x6_1111_894_20230827T034051Z_gen_g4_detsim_hitreco__20240229T175656Z_reco2.root"
21-Jan-2026 03:54:20 CET  Opened input file "root://xrootd1.esc.qmul.ac.uk:1094//dune/RSE/fardet-hd/5c/c7/nu_dune10kt_1x2x6_1111_894_20230827T034051Z_gen_g4_detsim_hitreco__20240229T175656Z_reco2.root"
Begin processing the 1st record. run: 1111 subRun: 1 event: 89401 at 21-Jan-2026 03:54:49 CET
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_Vertex_DUNEFD_HD_Accel_1_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_Vertex_DUNEFD_HD_Accel_1_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_Vertex_DUNEFD_HD_Accel_1_W_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_Vertex_DUNEFD_HD_Accel_2_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_Vertex_DUNEFD_HD_Accel_2_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_Vertex_DUNEFD_HD_Accel_2_W_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_U_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_V_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_SecVertex_DUNEFD_HD_Accel_1_W_v04_13_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_Hierarchy_DUNEFD_HD_T_Edge_v014_15_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_Hierarchy_DUNEFD_HD_T_Class_v014_15_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_Hierarchy_DUNEFD_HD_S_Class_v014_15_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_Hierarchy_DUNEFD_HD_TT_Edge_v014_15_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_Hierarchy_DUNEFD_HD_TT_Class_v014_15_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_Hierarchy_DUNEFD_HD_TS_Edge_v014_15_00.pt'
Loaded the TorchScript model '/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/6d59c39e4a7c3ff5018344c46a124ad7c3b4a8b5/PandoraNet_Hierarchy_DUNEFD_HD_TS_Class_v014_15_00.pt'
PandoraMonitoring, only able to use default TApplication (limited functionality).
21-Jan-2026 03:55:01 CET  Opened output file with pattern "%ifb_reco2.root"

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                        8.4           8.4           8.4           8.4            0            1     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                         0.0545048     0.0545048     0.0545048     0.0545048         0            1     
reco:pandora:StandardPandora                    8.34489       8.34489       8.34489       8.34489          0            1     
[art]:TriggerResults:TriggerResultInserter    5.3542e-05    5.3542e-05    5.3542e-05    5.3542e-05         0            1     
end_path:out1:RootOutput                      1.8506e-05    1.8506e-05    1.8506e-05    1.8506e-05         0            1     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 2084.75 MB
  Peak resident set size usage (VmHWM): 1031.76 MB
====================================================================================================
=== End last 100 lines of lar log file ===
justIN time: 2026-02-04 04:48:43 UTC       justIN version: 01.06.00