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Jobsub ID 297261.66@dunegpschedd01.fnal.gov

Jobsub ID297261.66@dunegpschedd01.fnal.gov
Workflow ID12134
Stage ID1
User namegalli@fnal.gov
RequestedProcessors1
GPUNo
RSS bytes4194304000 (4000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2026-01-21 01:16:12
SiteUK_Brunel
EntryCMSHTPC_T2_UK_London_Brunel_dc2_22
Last heartbeat2026-01-21 02:19:01
From worker nodeHostnamewn-b8-26-00.brunel.ac.uk
cpuinfoIntel(R) Xeon(R) CPU E5-2630 v3 @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit171000 (47 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2026-01-21 01:18:10
Input filesfardet-hd:atmnu_max_weighted_randompolicy_dune10kt_1x2x6_6390196_674_20231201T210453Z_gen_g4_detsim_hitreco__20240507T222551Z_reco2.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2026-01-21 02:19:01
Saved logsjustin-logs:297261.66-dunegpschedd01.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

Input PFN = root://xrootd1.esc.qmul.ac.uk:1094//dune/RSE/fardet-hd/59/f4/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_6390196_674_20231201T210453Z_gen_g4_detsim_hitreco__20240507T222551Z_reco2.root
Setting up larsoft UPS area... /cvmfs/larsoft.opensciencegrid.org
Setting up DUNE UPS area... /cvmfs/dune.opensciencegrid.org/products/dune/
Using custom sources from /cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2

MRB_PROJECT=larsoft
MRB_PROJECT_VERSION=v09_91_04
MRB_QUALS=e26:prof
MRB_TOP=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft
MRB_SOURCE=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/srcs
MRB_BUILDDIR=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/build_slf7.x86_64
MRB_INSTALL=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof

PRODUCTS=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof:/cvmfs/dune.opensciencegrid.org/products/dune/testproducts:/cvmfs/dune.opensciencegrid.org/products/dune:/cvmfs/larsoft.opensciencegrid.org/products:/cvmfs/larsoft.opensciencegrid.org/packages:/cvmfs/fermilab.opensciencegrid.org/products/common/db/
CETPKG_INSTALL=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof

local product directory is /cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof
----------- this block should be empty ------------------
---------------------------------------------------------
/cvmfs/larsoft.opensciencegrid.org/products/xrootd/v5_5_5a/Linux64bit+3.10-2.17-e26-p3915-prof/lib/libXrdPosixPreload.so
../justin-jobscript: line 77:  1261 Segmentation fault      (core dumped) lar -c $FCL_FILE $events_option $OUTPUT_CMD "$pfn" > ${fname}_reco_${now}.log 2>&1
lar exit code 139
=== Start last 100 lines of lar log file ===
N GENIE particles: 13
...............................................................

%MSG-e ana:  AtmSelection:atmselection@BeginModule 21-Jan-2026 02:12:51 GMT  run: 6390196 subRun: 1 event: 67455
... Filling Reco Tree ... 
%MSG
N PFParticles: 11
%MSG-e ana:  AtmSelection:atmselection@BeginModule 21-Jan-2026 02:12:51 GMT  run: 6390196 subRun: 1 event: 67455
------------------------ RECO ---------------------------------------
---> Module_Label: pandora;		 Instance_Name: ;	 Product_Type: recob::PFParticle; Output_Name: Reco
---> Module_Label: pandoraTrack;	 Instance_Name: ;	 Product_Type: recob::Track;	 Output_Name: Reco
---> Module_Label: pandora;		 Instance_Name: ;	 Product_Type: recob::Cluster;	 Output_Name: Reco
Number of PFParticles: 11
---------------------------------------------------------------------
%MSG
number: 0
EndHit of sim_muon: 0
EndHit of sim_muon: 0
EndHit of sim_muon: 0
EndHit of sim_muon: 0
EndHit of sim_muon: 0
EndHit of sim_muon: 0
EndHit of sim_muon: 0
EndHit of sim_muon: 0
WARNING: look into dedx vector size
EndHit of sim_muon: 0
WARNING: look into dedx vector size
EndHit of sim_muon: 0
Vertex vector size = 11
Begin processing the 56th record. run: 6390196 subRun: 1 event: 67456 at 21-Jan-2026 02:13:17 GMT
/home

CCNC: 1
PDG: -12
N GENIE particles: 27
...............................................................

Begin processing the 57th record. run: 6390196 subRun: 1 event: 67457 at 21-Jan-2026 02:14:53 GMT
/home

CCNC: 0
PDG: -12
N GENIE particles: 10
...............................................................

Begin processing the 58th record. run: 6390196 subRun: 1 event: 67458 at 21-Jan-2026 02:15:33 GMT
/home

CCNC: 0
PDG: 12
N GENIE particles: 13
...............................................................

Begin processing the 59th record. run: 6390196 subRun: 1 event: 67459 at 21-Jan-2026 02:15:52 GMT

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                     0.0811261      29.7595       269.631       14.1953       47.669         59     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                         0.0236696     0.467938       4.44052      0.111432      0.816632        59     
prod:emtrkmichelid:EmTrackMichelId              1.67305       26.1428       268.412       9.49488       46.3705        58     
[art]:TriggerResults:TriggerResultInserter    1.3554e-05    2.33096e-05   7.7441e-05     2.139e-05    1.0152e-05       58     
end_path:atmselection:AtmSelection             0.115658       3.65352       24.015       0.738344       5.91663        58     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 6936.43 MB
  Peak resident set size usage (VmHWM): 1274.31 MB
====================================================================================================
%MSG-s ArtException:  PostEndJob 21-Jan-2026 02:18:43 GMT ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- ScheduleExecutionFailure BEGIN
    Path: ProcessingStopped.
    ---- FileReadError BEGIN
      ---- FatalRootError BEGIN
        Fatal Root Error: TNetXNGFile::TNetXNGFile
        The remote file is not open
        ROOT severity: 3000
      ---- FatalRootError END
      
      The above exception was thrown while processing module EmTrackMichelId/emtrkmichelid run: 6390196 subRun: 1 event: 67459
    ---- FileReadError END
    Exception going through path prod
  ---- ScheduleExecutionFailure END
---- EventProcessorFailure END
---- FatalRootError BEGIN
  Fatal Root Error: TNetXNGFile::Close
  [FATAL] Hand shake failed
  ROOT severity: 3000
---- FatalRootError END
---- FatalRootError BEGIN
  Fatal Root Error: TNetXNGFile::Close
  [FATAL] Hand shake failed
  ROOT severity: 3000
---- FatalRootError END
%MSG
=== End last 100 lines of lar log file ===
.:
total 1156
-rw-r--r--. 1 dune000 dune 1118476 Jan 21 02:18 atmnu_max_weighted_randompolicy_dune10kt_1x2x6_6390196_674_20231201T210453Z_gen_g4_detsim_hitreco__20240507T222551Z_reco2_ana_2026-01-21T_011815Z.root
-rw-r--r--. 1 dune000 dune   48962 Jan 21 02:18 atmnu_max_weighted_randompolicy_dune10kt_1x2x6_6390196_674_20231201T210453Z_gen_g4_detsim_hitreco__20240507T222551Z_reco2_reco_2026-01-21T_011815Z.log
-rw-r--r--. 1 dune000 dune    6743 Jan 21 02:18 jobscript.log
-rw-r--r--. 1 dune000 dune     137 Jan 21 01:18 all-input-dids.txt
-rw-r--r--. 1 dune000 dune       0 Jan 21 01:18 debugprod.log
justIN time: 2026-02-04 07:45:02 UTC       justIN version: 01.06.00