justIN           Dashboard       Workflows       Jobs       AWT       Sites       Storages       Docs       Login

Jobsub ID 297341.162@dunegpschedd01.fnal.gov

Jobsub ID297341.162@dunegpschedd01.fnal.gov
Workflow ID12134
Stage ID1
User namegalli@fnal.gov
RequestedProcessors1
GPUNo
RSS bytes4194304000 (4000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2026-01-21 01:34:12
SiteUK_Sheffield
EntryDUNE_UK_Sheffield_lcgce2
Last heartbeat2026-01-21 02:19:59
From worker nodeHostnamewn085.hep
cpuinfoIntel(R) Xeon(R) CPU E5-2650 v2 @ 2.60GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit257400 (71 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2026-01-21 01:36:22
Input filesfardet-hd:atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50542214_606_20231201T223206Z_gen_g4_detsim_hitreco__20240507T204140Z_reco2.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2026-01-21 02:19:59
Saved logsjustin-logs:297341.162-dunegpschedd01.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

Input PFN = root://xrootd1.esc.qmul.ac.uk:1094//dune/RSE/fardet-hd/66/5c/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50542214_606_20231201T223206Z_gen_g4_detsim_hitreco__20240507T204140Z_reco2.root
Setting up larsoft UPS area... /cvmfs/larsoft.opensciencegrid.org
Setting up DUNE UPS area... /cvmfs/dune.opensciencegrid.org/products/dune/
Using custom sources from /cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2

MRB_PROJECT=larsoft
MRB_PROJECT_VERSION=v09_91_04
MRB_QUALS=e26:prof
MRB_TOP=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft
MRB_SOURCE=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/srcs
MRB_BUILDDIR=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/build_slf7.x86_64
MRB_INSTALL=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof

PRODUCTS=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof:/cvmfs/dune.opensciencegrid.org/products/dune/testproducts:/cvmfs/dune.opensciencegrid.org/products/dune:/cvmfs/larsoft.opensciencegrid.org/products:/cvmfs/larsoft.opensciencegrid.org/packages:/cvmfs/fermilab.opensciencegrid.org/products/common/db/
CETPKG_INSTALL=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof

local product directory is /cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof
----------- this block should be empty ------------------
---------------------------------------------------------
/cvmfs/larsoft.opensciencegrid.org/products/xrootd/v5_5_5a/Linux64bit+3.10-2.17-e26-p3915-prof/lib/libXrdPosixPreload.so
../justin-jobscript: line 77:  1262 Segmentation fault      (core dumped) lar -c $FCL_FILE $events_option $OUTPUT_CMD "$pfn" > ${fname}_reco_${now}.log 2>&1
lar exit code 139
=== Start last 100 lines of lar log file ===
EndHit of sim_muon: 21
Vertex vector size = 4
Begin processing the 34th record. run: 50542214 subRun: 1 event: 60634 at 21-Jan-2026 02:08:55 GMT
/home

CCNC: 1
PDG: -14
N GENIE particles: 12
...............................................................

Begin processing the 35th record. run: 50542214 subRun: 1 event: 60635 at 21-Jan-2026 02:08:59 GMT
/home

CCNC: 0
PDG: 12
N GENIE particles: 9
...............................................................

Begin processing the 36th record. run: 50542214 subRun: 1 event: 60636 at 21-Jan-2026 02:13:17 GMT
/home

CCNC: 0
PDG: 12
N GENIE particles: 20
...............................................................

%MSG-e ana:  AtmSelection:atmselection@BeginModule 21-Jan-2026 02:15:15 GMT  run: 50542214 subRun: 1 event: 60636
... Filling Reco Tree ... 
%MSG
N PFParticles: 7
%MSG-e ana:  AtmSelection:atmselection@BeginModule 21-Jan-2026 02:15:17 GMT  run: 50542214 subRun: 1 event: 60636
------------------------ RECO ---------------------------------------
---> Module_Label: pandora;		 Instance_Name: ;	 Product_Type: recob::PFParticle; Output_Name: Reco
---> Module_Label: pandoraTrack;	 Instance_Name: ;	 Product_Type: recob::Track;	 Output_Name: Reco
---> Module_Label: pandora;		 Instance_Name: ;	 Product_Type: recob::Cluster;	 Output_Name: Reco
Number of PFParticles: 7
---------------------------------------------------------------------
%MSG
number: 0
EndHit of sim_muon: 0
EndHit of sim_muon: 0
EndHit of sim_muon: 0
EndHit of sim_muon: 0
EndHit of sim_muon: 0
Vertex vector size = 6
Begin processing the 37th record. run: 50542214 subRun: 1 event: 60637 at 21-Jan-2026 02:15:29 GMT
/home

CCNC: 0
PDG: -12
N GENIE particles: 9
...............................................................

Begin processing the 38th record. run: 50542214 subRun: 1 event: 60638 at 21-Jan-2026 02:17:31 GMT

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                      2.23927       41.0125       254.759       13.3961       54.1214        38     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                         0.0135921      3.06399       65.2439      0.106542       11.6637        38     
prod:emtrkmichelid:EmTrackMichelId              1.94759       26.1428       143.186       9.62422       35.3916        37     
[art]:TriggerResults:TriggerResultInserter    2.4921e-05    5.27454e-05   0.000148651   4.6918e-05    2.55968e-05      37     
end_path:atmselection:AtmSelection             0.0808791      12.8307       157.38        1.36758       31.1525        37     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 6766.67 MB
  Peak resident set size usage (VmHWM): 1107.27 MB
====================================================================================================
%MSG-s ArtException:  PostEndJob 21-Jan-2026 02:19:36 GMT ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- ScheduleExecutionFailure BEGIN
    Path: ProcessingStopped.
    ---- FileReadError BEGIN
      ---- FatalRootError BEGIN
        Fatal Root Error: TNetXNGFile::TNetXNGFile
        The remote file is not open
        ROOT severity: 3000
      ---- FatalRootError END
      
      The above exception was thrown while processing module EmTrackMichelId/emtrkmichelid run: 50542214 subRun: 1 event: 60638
    ---- FileReadError END
    Exception going through path prod
  ---- ScheduleExecutionFailure END
---- EventProcessorFailure END
---- FatalRootError BEGIN
  Fatal Root Error: TNetXNGFile::Close
  [FATAL] Hand shake failed
  ROOT severity: 3000
---- FatalRootError END
---- FatalRootError BEGIN
  Fatal Root Error: TNetXNGFile::Close
  [FATAL] Hand shake failed
  ROOT severity: 3000
---- FatalRootError END
%MSG
=== End last 100 lines of lar log file ===
.:
total 1328
-rw-r--r--. 1 dune004 dune 1278482 Jan 21 02:19 atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50542214_606_20231201T223206Z_gen_g4_detsim_hitreco__20240507T204140Z_reco2_ana_2026-01-21T_013628Z.root
-rw-r--r--. 1 dune004 dune   63006 Jan 21 02:19 atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50542214_606_20231201T223206Z_gen_g4_detsim_hitreco__20240507T204140Z_reco2_reco_2026-01-21T_013628Z.log
-rw-r--r--. 1 dune004 dune    6732 Jan 21 02:19 jobscript.log
-rw-r--r--. 1 dune004 dune     138 Jan 21 01:36 all-input-dids.txt
-rw-r--r--. 1 dune004 dune       0 Jan 21 01:36 debugprod.log
justIN time: 2026-02-04 04:52:59 UTC       justIN version: 01.06.00