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Jobsub ID 297646.147@dunegpschedd01.fnal.gov

Jobsub ID297646.147@dunegpschedd01.fnal.gov
Workflow ID12141
Stage ID1
User namegalli@fnal.gov
RequestedProcessors1
GPUNo
RSS bytes4194304000 (4000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2026-01-21 03:02:16
SiteUK_Brunel
EntryCMSHTPC_T2_UK_London_Brunel_dc2_22
Last heartbeat2026-01-21 04:56:29
From worker nodeHostnamewn-b8-26-01.brunel.ac.uk
cpuinfoIntel(R) Xeon(R) CPU E5-2630 v3 @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit171000 (47 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2026-01-21 03:04:16
Input filesfardet-hd:atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50258005_451_20231121T154550Z_gen_g4_detsim_hitreco__20240503T053854Z_reco2.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2026-01-21 04:56:29
Saved logsjustin-logs:297646.147-dunegpschedd01.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

Input PFN = root://xrootd1.esc.qmul.ac.uk:1094//dune/RSE/fardet-hd/00/b0/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50258005_451_20231121T154550Z_gen_g4_detsim_hitreco__20240503T053854Z_reco2.root
Setting up larsoft UPS area... /cvmfs/larsoft.opensciencegrid.org
Setting up DUNE UPS area... /cvmfs/dune.opensciencegrid.org/products/dune/
Using custom sources from /cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2

MRB_PROJECT=larsoft
MRB_PROJECT_VERSION=v09_91_04
MRB_QUALS=e26:prof
MRB_TOP=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft
MRB_SOURCE=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/srcs
MRB_BUILDDIR=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/build_slf7.x86_64
MRB_INSTALL=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof

PRODUCTS=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof:/cvmfs/dune.opensciencegrid.org/products/dune/testproducts:/cvmfs/dune.opensciencegrid.org/products/dune:/cvmfs/larsoft.opensciencegrid.org/products:/cvmfs/larsoft.opensciencegrid.org/packages:/cvmfs/fermilab.opensciencegrid.org/products/common/db/
CETPKG_INSTALL=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof

local product directory is /cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof
----------- this block should be empty ------------------
---------------------------------------------------------
/cvmfs/larsoft.opensciencegrid.org/products/xrootd/v5_5_5a/Linux64bit+3.10-2.17-e26-p3915-prof/lib/libXrdPosixPreload.so
../justin-jobscript: line 77:  1261 Segmentation fault      (core dumped) lar -c $FCL_FILE $events_option $OUTPUT_CMD "$pfn" > ${fname}_reco_${now}.log 2>&1
lar exit code 139
=== Start last 100 lines of lar log file ===
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 173
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 174
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 175
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 176
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 177
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 178
%MSG-e ana:  MyAnalysis:myanalysis@BeginModule 21-Jan-2026 04:45:31 GMT  run: 50258005 subRun: 1 event: 90297
... Filling Reco Tree ... 
%MSG
N PFParticles: 3
%MSG-e ana:  MyAnalysis:myanalysis@BeginModule 21-Jan-2026 04:45:32 GMT  run: 50258005 subRun: 1 event: 90297
------------------------ RECO ---------------------------------------
---> Module_Label: pandora;		 Instance_Name: ;	 Product_Type: recob::PFParticle; Output_Name: Reco
---> Module_Label: pandoraTrack;	 Instance_Name: ;	 Product_Type: recob::Track;	 Output_Name: Reco
---> Module_Label: pandora;		 Instance_Name: ;	 Product_Type: recob::Cluster;	 Output_Name: Reco
Number of PFParticles: 3
---------------------------------------------------------------------
%MSG
number: 0
EndHit of sim_muon: 17
EndHit of sim_muon: 0
Size Hits: 1165
Size Selected Hits: 1061
Size Difference: 104
Vertex vector size = 3
Begin processing the 98th record. run: 50258005 subRun: 1 event: 90298 at 21-Jan-2026 04:45:55 GMT
/home

Begin processing the 99th record. run: 50258005 subRun: 1 event: 90299 at 21-Jan-2026 04:46:52 GMT
/home

Begin processing the 100th record. run: 50258005 subRun: 1 event: 90300 at 21-Jan-2026 04:51:17 GMT
/home

Begin processing the 101st record. run: 50258005 subRun: 1 event: 90301 at 21-Jan-2026 04:51:32 GMT
/home

CCNC: 0
PDG: 14
N GENIE particles: 12
...............................................................

Begin processing the 102nd record. run: 50258005 subRun: 1 event: 90302 at 21-Jan-2026 04:51:56 GMT
/home

CCNC: 0
PDG: 14
N GENIE particles: 10
...............................................................

Begin processing the 103rd record. run: 50258005 subRun: 1 event: 90303 at 21-Jan-2026 04:53:31 GMT
/home

Begin processing the 104th record. run: 50258005 subRun: 1 event: 90304 at 21-Jan-2026 04:53:58 GMT
/home


================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                      1.53904       41.3844       368.254       19.4941       60.1303        104    
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                         0.0249158      1.37227       64.3141      0.141003       6.60524        104    
prod:emtrkmichelid:EmTrackMichelId              1.33629       31.7233       367.955       15.8609       52.0745        104    
[art]:TriggerResults:TriggerResultInserter     1.241e-05    2.15069e-05   0.000116035    2.067e-05    1.05573e-05      104    
end_path:myanalysis:MyAnalysis                0.00034944      8.28855       228.762      0.0373223      32.9137        104    
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 6962.44 MB
  Peak resident set size usage (VmHWM): 1298.77 MB
====================================================================================================
%MSG-s ArtException:  PostEndJob 21-Jan-2026 04:56:09 GMT ModuleEndJob
---- FileReadError BEGIN
  ---- FatalRootError BEGIN
    Fatal Root Error: TNetXNGFile::ReadBuffer
    [FATAL] Hand shake failed
    ROOT severity: 3000
  ---- FatalRootError END
  
---- FileReadError END
---- FatalRootError BEGIN
  Fatal Root Error: TNetXNGFile::Close
  [FATAL] Hand shake failed
  ROOT severity: 3000
---- FatalRootError END
---- FatalRootError BEGIN
  Fatal Root Error: TNetXNGFile::Close
  [FATAL] Hand shake failed
  ROOT severity: 3000
---- FatalRootError END
%MSG
=== End last 100 lines of lar log file ===
.:
total 1408
-rw-r--r--. 1 dune000 dune 1221920 Jan 21 04:56 atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50258005_451_20231121T154550Z_gen_g4_detsim_hitreco__20240503T053854Z_reco2_ana_2026-01-21T_030421Z.root
-rw-r--r--. 1 dune000 dune  204044 Jan 21 04:56 atmnu_max_weighted_randompolicy_dune10kt_1x2x6_50258005_451_20231121T154550Z_gen_g4_detsim_hitreco__20240503T053854Z_reco2_reco_2026-01-21T_030421Z.log
-rw-r--r--. 1 dune000 dune    6691 Jan 21 04:56 jobscript.log
-rw-r--r--. 1 dune000 dune     138 Jan 21 03:04 all-input-dids.txt
-rw-r--r--. 1 dune000 dune       0 Jan 21 03:04 debugprod.log
justIN time: 2026-02-04 04:29:49 UTC       justIN version: 01.06.00