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Jobsub ID 297681.0@dunegpschedd01.fnal.gov

Jobsub ID297681.0@dunegpschedd01.fnal.gov
Workflow TestingYes
Workflow ID1
Stage ID1
User nameamcnab@fnal.gov
RequestedProcessors1
GPUNo
RSS bytes1073741824 (1024 MiB)
Wall seconds limit3600 (1 hours)
Submitted time2026-01-21 03:14:15
SiteBR_CBPF
EntryDUNE_BR_CBPF_ce04
Last heartbeat2026-01-21 03:49:46
From worker nodeHostnamewn125
cpuinfoAMD EPYC 7713P 64-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes1310720000 (1250 MiB)
Wall seconds limit257400 (71 hours)
GPU
Inner Apptainer?True
Job statefinished
Started2026-01-21 03:27:46
Input files
JobscriptExit code0
Real time17m (1067s)
CPU time0m (44s = 4%)
Max RSS bytes65789952 (62 MiB)
Outputting started2026-01-21 03:45:34
Output files
Finished2026-01-21 03:49:46
Saved logsjustin-logs:297681.0-dunegpschedd01.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

eation lock <dogpile.cache.region.CacheRegion._LockWrapper object at 0x1513499ca970> acquired
DEBUG:dogpile.cache.region:No value present for key: "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Calling creation function for not-yet-present value
DEBUG:dogpile.cache.region:Cache value generated in 0.000 seconds for key(s): "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Released creation lock
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/?expression=T3_US_NERSC HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/T3_US_NERSC HTTP/1.1" 200 1240
DEBUG:root:Input validation done.
INFO:root:Preparing upload for file awt-1768966073-iUDk3w7ljy
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/T3_US_NERSC/attr/ HTTP/1.1" 200 139
DEBUG:root:wan domain is used for the upload
DEBUG:root:Registering file
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /accounts/dunepro/scopes/ HTTP/1.1" 200 870
DEBUG:root:Trying to create dataset: testpro:awt-uploads-202603
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202603 HTTP/1.1" 409 104
INFO:root:Dataset testpro:awt-uploads-202603 already exists - no rule will be created
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-1768966073-iUDk3w7ljy/meta?plugin=DID_COLUMN HTTP/1.1" 404 129
DEBUG:root:File DID does not exist
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas HTTP/1.1" 201 7
INFO:root:Successfully added replica in Rucio catalogue at T3_US_NERSC
DEBUG:root:gfal.NoRename: connecting to storage
DEBUG:root:Checking if davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/c8/c5/awt-1768966073-iUDk3w7ljy exists
DEBUG:root:gfal.NoRename: checking if file exists davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/c8/c5/awt-1768966073-iUDk3w7ljy
DEBUG:root:gfal.NoRename: closing protocol connection
DEBUG:root:[{'hostname': 'dtn14.nersc.gov', 'scheme': 'root', 'port': 1094, 'prefix': '//global/cfs/cdirs/m3249/dune/RSE', 'impl': 'rucio.rse.protocols.gfal.NoRename', 'domains': {'lan': {'read': 10, 'write': 10, 'delete': 10}, 'wan': {'read': 10, 'write': 10, 'delete': 10, 'third_party_copy_read': 0, 'third_party_copy_write': 0}}, 'extended_attributes': None}, {'hostname': 'dtn14.nersc.gov', 'scheme': 'davs', 'port': 1094, 'prefix': '/global/cfs/cdirs/m3249/dune/RSE', 'impl': 'rucio.rse.protocols.gfal.NoRename', 'domains': {'lan': {'read': 1, 'write': 1, 'delete': 1}, 'wan': {'read': 1, 'write': 1, 'delete': 1, 'third_party_copy_read': 1, 'third_party_copy_write': 1}}, 'extended_attributes': None}]
INFO:root:Trying upload with davs to T3_US_NERSC
DEBUG:root:Processing upload with the domain: wan
DEBUG:root:gfal.NoRename: connecting to storage
DEBUG:root:The PFN created from the LFN: davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/c8/c5/awt-1768966073-iUDk3w7ljy
DEBUG:root:gfal.NoRename: checking if file exists davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/c8/c5/awt-1768966073-iUDk3w7ljy
DEBUG:root:gfal.NoRename: checking if file exists davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/c8/c5/awt-1768966073-iUDk3w7ljy
DEBUG:root:put: Attempt 1
DEBUG:root:gfal.NoRename: uploading file from awt-1768966073-iUDk3w7ljy to davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/c8/c5/awt-1768966073-iUDk3w7ljy
INFO:root:Successful upload of temporary file. davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/c8/c5/awt-1768966073-iUDk3w7ljy
DEBUG:root:skip_upload_stat=False
DEBUG:root:stat: pfn=davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/c8/c5/awt-1768966073-iUDk3w7ljy
DEBUG:root:gfal.NoRename: getting stats of file davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/c8/c5/awt-1768966073-iUDk3w7ljy
DEBUG:root:Filesize: Expected=26 Found=26
DEBUG:root:Checksum: Expected=61d10763 Found=61d10763
DEBUG:root:gfal.NoRename: closing protocol connection
DEBUG:root:Upload done.
INFO:root:Successfully uploaded file awt-1768966073-iUDk3w7ljy
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v38_1_0/NULL/lib/python3.9/site-packages/urllib3/connectionpool.py:1061: InsecureRequestWarning: Unverified HTTPS request is being made to host 'dune-rucio.fnal.gov'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/1.26.x/advanced-usage.html#ssl-warnings
  warnings.warn(
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /traces/ HTTP/1.1" 404 207
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "PUT /replicas HTTP/1.1" 200 0
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202603/dids HTTP/1.1" 201 7
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas/list HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-1768966073-iUDk3w7ljy/parents HTTP/1.1" 200 None
--- Upload try 1/1
--- Rucio upload 1/1 returns 0
--- Replica check try 1/1
--- Dataset awt-uploads-202603 check try 1/1
--- Upload, replicas, and datasets checks passed
'justin-rucio-upload --rse T3_US_NERSC --protocol davs --scope testpro --dataset awt-uploads-202603 awt-1768966073-iUDk3w7ljy --timeout 1200' returns 0


subject   : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=3462494137/CN=176896606615
issuer    : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=3462494137
identity  : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=3462494137
type      : RFC compliant proxy
strength  : 2048 bits
path      : /home/awt-proxy.pem
timeleft  : 167:42:13
key usage : Digital Signature, Key Encipherment, Key Agreement
=== VO dune extension information ===
VO        : dune
subject   : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk
issuer    : /DC=org/DC=incommon/C=US/ST=Illinois/O=Fermi Research Alliance/CN=voms1.fnal.gov
attribute : /dune/Role=Production/Capability=NULL
attribute : /dune/Role=NULL/Capability=NULL
timeleft  : 167:37:28
uri       : voms1.fnal.gov:15042

===== Results =====

Download/upload commands:
xrdcp --force --nopbar --verbose $read_pfn downloaded.txt
echo '{"namespace":"testpro","name":"FILENAME","size":0}' >tmp.json
metacat file declare --json -f tmp.json "dune:all"
justin-rucio-upload --rse $rse_name --protocol $write_protocol --scope testpro --dataset awt-uploads-202603 --timeout 1200 FILENAME
Use the wrapper job link on the page for the job on the justIN Dashboard to find the full log file, with errors from these commands

Each line: $JUSTIN_SITE_NAME $rse_name $download_retval $upload_retval $read_pfn $write_protocol
==awt== BR_CBPF DUNE_CA_SFU 0 0 root://lcg-dunese1.sfu.computecanada.ca:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_CERN_EOS 0 0 root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_ES_PIC 0 0 root://xrootd.pic.es:1094/pnfs/pic.es/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_FR_CCIN2P3_DISK 0 0 root://ccxrootdegee.in2p3.fr:1094/pnfs/in2p3.fr/data/dune/disk/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_IT_INFN_CNAF 0 0 root://xrootd-archive.cr.cnaf.infn.it:1096//dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_UK_GLASGOW 0 0 root://cephc02.gla.scotgrid.ac.uk:1094//cephfs/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_UK_LANCASTER_CEPH 0 0 root://xgate.hec.lancs.ac.uk:1094//cephfs/grid/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_UK_MANCHESTER_CEPH 0 0 root://meitner.tier2.hep.manchester.ac.uk:1094//cephfs/experiments/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_US_BNL_SDCC 0 0 root://dcdndoor.sdcc.bnl.gov:1094//pnfs/sdcc.bnl.gov/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF DUNE_US_FNAL_DISK_STAGE 0 0 root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF FNAL_DCACHE 0 99 root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/tape_backed/dunepro//other/awt-staging/awt-download-2023-03-07-01.txt_1749841165 davs
==awt== BR_CBPF NIKHEF 0 0 root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF PRAGUE 0 0 root://se1.farm.particle.cz:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF QMUL 0 0 root://xrootd1.esc.qmul.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF RAL-PP 0 0 root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF RAL_ECHO 0 0 root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF SURFSARA 0 0 root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== BR_CBPF T3_US_NERSC 0 0 root://dtn14.nersc.gov:1094//global/cfs/cdirs/m3249/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
justIN time: 2026-02-04 09:14:52 UTC       justIN version: 01.06.00