Jobsub ID 36348.117@dunegpschedd02.fnal.gov
| Jobsub ID | 36348.117@dunegpschedd02.fnal.gov |
| Workflow ID | 2330 |
| Stage ID | 1 |
| User name | ykermaid@fnal.gov |
| HTCondor Group | group_dune.prod.mcsim |
| Requested | Processors | 1 |
| GPU | No |
| RSS bytes | 4193255424 (3999 MiB) |
| Wall seconds limit | 18000 (5 hours) |
| Submitted time | 2025-09-08 12:17:56 |
| Site | UK_QMUL |
| Entry | DUNE_UK_London_QMUL_arcce02 |
| Last heartbeat | 2025-09-08 15:55:41 |
| From worker node | Hostname | cn036.htc.esc.qmul |
| cpuinfo | Intel(R) Xeon(R) Gold 6248R CPU @ 3.00GHz |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 171000 (47 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | jobscript_error |
| Started | 2025-09-08 14:27:26 |
| Input files | vd-protodune:np02vd_raw_run039324_3014_df-s04-d1_dw_0_20250908T085539.hdf5
|
| Jobscript | Exit code | 1 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Max RSS bytes | 0 (0 MiB) |
| Outputting started | |
| Output files | |
| Finished | 2025-09-08 15:55:41 |
| Saved logs | justin-logs:36348.117-dunegpschedd02.fnal.gov.logs.tgz |
| List job events Cached HTCondor job logs |
Jobscript log (last 10,000 characters)
---------------------------------------------------------------------------------------------------------------------------
source:HDF5RawInput3(read) 9.0452e-05 0.000130521 0.000265822 0.000128388 3.55226e-05 24
produce:tpcrawdecoder:PDVDTPCReader 12.5915 16.4455 57.6303 14.0538 8.75904 24
produce:triggerrawdecoder:PDVDTriggerReader4 0.0329315 0.0378994 0.102617 0.0333029 0.0145853 24
produce:pdvddaphne:DAPHNEReaderPDVD 4.30597 5.37818 6.61161 5.4698 0.693683 24
produce:ophit:OpHitFinder 0.0428998 0.062553 0.081768 0.0668643 0.01289 24
produce:opflash:OpFlashFinderVerticalDrift 0.00821849 0.0147404 0.0225809 0.0144505 0.00431214 24
produce:wclsdatavd:WireCellToolkit 50.568 74.371 115.395 66.8769 19.6787 24
produce:gaushit:GausHitFinder 0.747305 1.63903 2.41824 1.59205 0.451853 24
produce:nhitsfilter:NumberOfHitsFilter 0.000336313 0.000661446 0.00118786 0.000593934 0.000222643 24
produce:reco3d:SpacePointSolver 5.72141 13.7838 21.7475 13.8953 4.33113 24
produce:hitpdune:DisambigFromSpacePoints 0.116492 0.319155 0.57374 0.305275 0.112317 24
produce:pandora:StandardPandora 19.8975 89.521 344.64 78.7496 66.4501 24
produce:pandoraTrack:LArPandoraTrackCreation 0.578798 2.86715 7.48305 2.87793 1.79299 24
produce:pandoraGnocalo:GnocchiCalorimetry 0.0192994 0.0425427 0.0853545 0.0405241 0.0154853 24
[art]:TriggerResults:TriggerResultInserter 3.2018e-05 4.96352e-05 0.000114434 4.44475e-05 1.73248e-05 24
end_path:out1:RootOutput 6.252e-06 1.12482e-05 3.3626e-05 9.272e-06 5.65779e-06 24
end_path:out1:RootOutput(write) 3.02027 5.01258 7.46624 4.99375 1.3976 24
==================================================================================================================================
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 5115.23 MB
Peak resident set size usage (VmHWM): 3217.6 MB
Details saved in: 'mem.db'
====================================================================================================
Art has completed and will exit with status 0.
Output files:
\tReco: np02vd_raw_run039324_3014_df-s04-d1_dw_0_20250908T085539_reco_stage1_20250908T155226_keepup.root
\tHists: np02vd_raw_run039324_3014_df-s04-d1_dw_0_20250908T085539_reco_stage1_20250908T155229_keepup_hists.root
Forming reco metadata
Successfully opened file np02vd_raw_run039324_3014_df-s04-d1_dw_0_20250908T085539_reco_stage1_20250908T155226_keepup.root
Traceback (most recent call last):
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connection.py", line 169, in _new_conn
conn = connection.create_connection(
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/util/connection.py", line 96, in create_connection
raise err
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/util/connection.py", line 86, in create_connection
sock.connect(sa)
ConnectionRefusedError: [Errno 111] Connection refused
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 699, in urlopen
httplib_response = self._make_request(
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 382, in _make_request
self._validate_conn(conn)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 1010, in _validate_conn
conn.connect()
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connection.py", line 353, in connect
conn = self._new_conn()
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connection.py", line 181, in _new_conn
raise NewConnectionError(
urllib3.exceptions.NewConnectionError: <urllib3.connection.HTTPSConnection object at 0x14cc2f7b1520>: Failed to establish a new connection: [Errno 111] Connection refused
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/adapters.py", line 439, in send
resp = conn.urlopen(
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 755, in urlopen
retries = retries.increment(
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/util/retry.py", line 574, in increment
raise MaxRetryError(_pool, url, error or ResponseError(cause))
urllib3.exceptions.MaxRetryError: HTTPSConnectionPool(host='metacat.fnal.gov', port=9443): Max retries exceeded with url: /dune_meta_prod/app/data/file?with_metadata=yes&with_provenance=no&with_datasets=no&name=np02vd_raw_run039324_3014_df-s04-d1_dw_0_20250908T085539.hdf5&namespace=vd-protodune (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x14cc2f7b1520>: Failed to establish a new connection: [Errno 111] Connection refused'))
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/runpy.py", line 197, in _run_module_as_main
return _run_code(code, main_globals, None,
File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/runpy.py", line 87, in _run_code
exec(code, run_globals)
File "/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/20943968d0063a8f11ac6a4062b5ad0c8392b138/meta_maker.py", line 48, in <module>
results = inherit_metadata.inherit(args.parent)
File "/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/20943968d0063a8f11ac6a4062b5ad0c8392b138/inherit_metadata.py", line 72, in inherit
'metadata':get_parent_md(parent_name),
File "/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/20943968d0063a8f11ac6a4062b5ad0c8392b138/inherit_metadata.py", line 27, in get_parent_md
parent_file = mc.get_file(did=parent_name, with_metadata=True,
File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 1259, in get_file
return self.get_json(url)
File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 206, in get_json
return self.unpack_json_data(self.send_request("get", uri_suffix, headers=headers, stream=True))
File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 154, in send_request
self.LastResponse = response = self.retry_request(method, url, headers=headers, **args)
File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 131, in retry_request
response = requests.get(url, timeout=self.Timeout, **args)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/api.py", line 75, in get
return request('get', url, params=params, **kwargs)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/api.py", line 61, in request
return session.request(method=method, url=url, **kwargs)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/sessions.py", line 542, in request
resp = self.send(prep, **send_kwargs)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/sessions.py", line 655, in send
r = adapter.send(request, **kwargs)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/adapters.py", line 516, in send
raise ConnectionError(e, request=request)
requests.exceptions.ConnectionError: HTTPSConnectionPool(host='metacat.fnal.gov', port=9443): Max retries exceeded with url: /dune_meta_prod/app/data/file?with_metadata=yes&with_provenance=no&with_datasets=no&name=np02vd_raw_run039324_3014_df-s04-d1_dw_0_20250908T085539.hdf5&namespace=vd-protodune (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x14cc2f7b1520>: Failed to establish a new connection: [Errno 111] Connection refused'))
Error in reco metadata 