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Jobsub ID 36362.78@dunegpschedd02.fnal.gov

Jobsub ID36362.78@dunegpschedd02.fnal.gov
Workflow ID2330
Stage ID1
User nameykermaid@fnal.gov
HTCondor Groupgroup_dune.prod.mcsim
RequestedProcessors1
GPUNo
RSS bytes4193255424 (3999 MiB)
Wall seconds limit18000 (5 hours)
Submitted time2025-09-08 12:47:59
SiteUK_RAL-Tier1
EntryLIGO_UK_RAL_arc_ce04
Last heartbeat2025-09-08 15:52:41
From worker nodeHostnamedune001-7615921.0-lcg2606.gridpp.rl.ac.uk
cpuinfoAMD EPYC 7763 64-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit216000 (60 hours)
GPU
Inner Apptainer?True
Job stateoutputting_failed
Started2025-09-08 14:44:13
Input filesvd-protodune:np02vd_raw_run039327_0009_df-s04-d0_dw_0_20250908T104117.hdf5
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-09-08 15:52:41
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

Input3(read)                      8.2301e-05    0.000136614   0.000215304   0.000124572   4.07603e-05      20     
produce:tpcrawdecoder:PDVDTPCReader               11.775        17.4247       20.6621       17.5676       1.51461        20     
produce:triggerrawdecoder:PDVDTriggerReader4     0.685173      0.702897      0.746756      0.693604      0.0186805       20     
produce:pdvddaphne:DAPHNEReaderPDVD             0.000368816   0.000485299   0.00114183    0.000457933   0.000160231      20     
produce:ophit:OpHitFinder                       0.000160073   0.000275571   0.00122562    0.000215899   0.000232436      20     
produce:opflash:OpFlashFinderVerticalDrift       5.685e-05    0.00010294    0.000538849   7.74715e-05    0.0001014       20     
produce:wclsdatavd:WireCellToolkit                23.9128       85.2083       109.227       85.1601       17.0173        20     
produce:gaushit:GausHitFinder                     1.27903       1.90538       2.79629       1.81909      0.347531        20     
produce:nhitsfilter:NumberOfHitsFilter          0.000186674   0.000604969    0.0010909    0.000558225   0.000217241      20     
produce:reco3d:SpacePointSolver                   3.03032       17.3316       30.094        16.5068       5.36718        20     
produce:hitpdune:DisambigFromSpacePoints         0.0564704     0.262744       0.47027      0.268515      0.0903253       20     
produce:pandora:StandardPandora                   11.2089       63.5238       139.688       63.3625       25.8257        20     
produce:pandoraTrack:LArPandoraTrackCreation     0.261017       1.42033       3.50238       1.28904      0.659597        20     
produce:pandoraGnocalo:GnocchiCalorimetry        0.0129356     0.0451342     0.0735362     0.0445709     0.0133592       20     
[art]:TriggerResults:TriggerResultInserter      3.0481e-05    5.29651e-05   0.000116072   4.7801e-05    2.11362e-05      20     
end_path:out1:RootOutput                         4.51e-06     1.22468e-05    3.756e-05    1.06755e-05   7.49569e-06      20     
end_path:out1:RootOutput(write)                   1.89281       6.14784       7.41085       6.23795       1.09796        20     
==================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 4858.75 MB
  Peak resident set size usage (VmHWM): 2746.43 MB
  Details saved in: 'mem.db'
====================================================================================================
Art has completed and will exit with status 0.
Output files:
\tReco: np02vd_raw_run039327_0009_df-s04-d0_dw_0_20250908T104117_reco_stage1_20250908T154946_keepup.root
\tHists: np02vd_raw_run039327_0009_df-s04-d0_dw_0_20250908T104117_reco_stage1_20250908T154946_keepup_hists.root
Forming reco metadata
Successfully opened file np02vd_raw_run039327_0009_df-s04-d0_dw_0_20250908T104117_reco_stage1_20250908T154946_keepup.root
Traceback (most recent call last):
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 699, in urlopen
    httplib_response = self._make_request(
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 445, in _make_request
    six.raise_from(e, None)
  File "<string>", line 3, in raise_from
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 440, in _make_request
    httplib_response = conn.getresponse()
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/http/client.py", line 1377, in getresponse
    response.begin()
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/http/client.py", line 320, in begin
    version, status, reason = self._read_status()
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/http/client.py", line 289, in _read_status
    raise RemoteDisconnected("Remote end closed connection without"
http.client.RemoteDisconnected: Remote end closed connection without response

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/adapters.py", line 439, in send
    resp = conn.urlopen(
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 755, in urlopen
    retries = retries.increment(
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/util/retry.py", line 532, in increment
    raise six.reraise(type(error), error, _stacktrace)
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/packages/six.py", line 769, in reraise
    raise value.with_traceback(tb)
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 699, in urlopen
    httplib_response = self._make_request(
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 445, in _make_request
    six.raise_from(e, None)
  File "<string>", line 3, in raise_from
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 440, in _make_request
    httplib_response = conn.getresponse()
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/http/client.py", line 1377, in getresponse
    response.begin()
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/http/client.py", line 320, in begin
    version, status, reason = self._read_status()
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/http/client.py", line 289, in _read_status
    raise RemoteDisconnected("Remote end closed connection without"
urllib3.exceptions.ProtocolError: ('Connection aborted.', RemoteDisconnected('Remote end closed connection without response'))

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/runpy.py", line 197, in _run_module_as_main
    return _run_code(code, main_globals, None,
  File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/runpy.py", line 87, in _run_code
    exec(code, run_globals)
  File "/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/20943968d0063a8f11ac6a4062b5ad0c8392b138/meta_maker.py", line 48, in <module>
    results = inherit_metadata.inherit(args.parent)
  File "/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/20943968d0063a8f11ac6a4062b5ad0c8392b138/inherit_metadata.py", line 72, in inherit
    'metadata':get_parent_md(parent_name),
  File "/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/20943968d0063a8f11ac6a4062b5ad0c8392b138/inherit_metadata.py", line 27, in get_parent_md
    parent_file = mc.get_file(did=parent_name, with_metadata=True,
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 1259, in get_file
    return self.get_json(url)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 206, in get_json
    return self.unpack_json_data(self.send_request("get", uri_suffix, headers=headers, stream=True))
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 154, in send_request
    self.LastResponse = response = self.retry_request(method, url, headers=headers, **args)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 131, in retry_request
    response = requests.get(url, timeout=self.Timeout, **args)
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/api.py", line 75, in get
    return request('get', url, params=params, **kwargs)
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/api.py", line 61, in request
    return session.request(method=method, url=url, **kwargs)
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/sessions.py", line 542, in request
    resp = self.send(prep, **send_kwargs)
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/sessions.py", line 655, in send
    r = adapter.send(request, **kwargs)
  File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/adapters.py", line 498, in send
    raise ConnectionError(err, request=request)
requests.exceptions.ConnectionError: ('Connection aborted.', RemoteDisconnected('Remote end closed connection without response'))
Error in reco metadata
justIN time: 2025-09-18 23:27:56 UTC       justIN version: 01.05.00