Jobsub ID 36365.157@dunegpschedd02.fnal.gov
| Jobsub ID | 36365.157@dunegpschedd02.fnal.gov |
| Workflow ID | 2326 |
| Stage ID | 1 |
| User name | ykermaid@fnal.gov |
| HTCondor Group | group_dune.prod.mcsim |
| Requested | Processors | 1 |
| GPU | No |
| RSS bytes | 4193255424 (3999 MiB) |
| Wall seconds limit | 18000 (5 hours) |
| Submitted time | 2025-09-08 12:59:55 |
| Site | NL_SURFsara |
| Entry | DUNE_SurfSARA_arc03 |
| Last heartbeat | 2025-09-08 15:52:58 |
| From worker node | Hostname | wn-la-17.gina.surf.nl |
| cpuinfo | AMD EPYC 9754 128-Core Processor |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 129600 (36 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | outputting_failed |
| Started | 2025-09-08 14:48:34 |
| Input files | vd-protodune:np02vd_raw_run039324_2281_df-s05-d2_dw_0_20250907T161033.hdf5
|
| Jobscript | Exit code | 1 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Max RSS bytes | 0 (0 MiB) |
| Outputting started | |
| Output files | |
| Finished | 2025-09-08 15:52:58 |
| List job events Cached HTCondor job logs |
Jobscript log (last 10,000 characters)
--------------------------------------------------------------------------------------------------------------------------
source:HDF5RawInput3(read) 7.9099e-05 0.00010177 0.000297785 8.7255e-05 4.62821e-05 20
produce:tpcrawdecoder:PDVDTPCReader 12.9982 16.1514 18.6858 16.5861 1.39937 20
produce:triggerrawdecoder:PDVDTriggerReader4 0.0376184 0.0407504 0.0454533 0.0405555 0.0020869 20
produce:pdvddaphne:DAPHNEReaderPDVD 4.00008 4.52992 5.62344 4.37331 0.396264 20
produce:ophit:OpHitFinder 0.0448134 0.0604518 0.127958 0.057961 0.016012 20
produce:opflash:OpFlashFinderVerticalDrift 0.00822748 0.01327 0.0200936 0.0124414 0.00326054 20
produce:wclsdatavd:WireCellToolkit 49.9423 82.7945 101.458 90.3644 16.141 20
produce:gaushit:GausHitFinder 0.760915 1.3633 2.14003 1.26544 0.347849 20
produce:nhitsfilter:NumberOfHitsFilter 0.000386576 0.0007683 0.0014102 0.000658608 0.000305155 20
produce:reco3d:SpacePointSolver 7.37252 16.8562 28.916 17.0082 5.79428 20
produce:hitpdune:DisambigFromSpacePoints 0.082748 0.223615 0.417065 0.234085 0.0789506 20
produce:pandora:StandardPandora 18.6873 56.6422 149.869 44.6705 32.2533 20
produce:pandoraTrack:LArPandoraTrackCreation 0.412222 2.11817 7.00389 1.53042 1.53263 20
produce:pandoraGnocalo:GnocchiCalorimetry 0.0154411 0.0375355 0.0678629 0.0384263 0.0127635 20
[art]:TriggerResults:TriggerResultInserter 2.7781e-05 5.45475e-05 0.00014199 4.8732e-05 2.60328e-05 20
end_path:out1:RootOutput 6.419e-06 1.10615e-05 3.1697e-05 8.838e-06 6.65472e-06 20
end_path:out1:RootOutput(write) 4.47168 6.03908 6.90415 6.41247 0.874206 20
==================================================================================================================================
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 4904.25 MB
Peak resident set size usage (VmHWM): 3017.49 MB
Details saved in: 'mem.db'
====================================================================================================
Art has completed and will exit with status 0.
Output files:
\tReco: np02vd_raw_run039324_2281_df-s05-d2_dw_0_20250907T161033_reco_stage1_20250908T155156_keepup.root
\tHists: np02vd_raw_run039324_2281_df-s05-d2_dw_0_20250907T161033_reco_stage1_20250908T155156_keepup_hists.root
Forming reco metadata
Successfully opened file np02vd_raw_run039324_2281_df-s05-d2_dw_0_20250907T161033_reco_stage1_20250908T155156_keepup.root
Traceback (most recent call last):
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connection.py", line 169, in _new_conn
conn = connection.create_connection(
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/util/connection.py", line 96, in create_connection
raise err
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/util/connection.py", line 86, in create_connection
sock.connect(sa)
ConnectionRefusedError: [Errno 111] Connection refused
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 699, in urlopen
httplib_response = self._make_request(
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 382, in _make_request
self._validate_conn(conn)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 1010, in _validate_conn
conn.connect()
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connection.py", line 353, in connect
conn = self._new_conn()
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connection.py", line 181, in _new_conn
raise NewConnectionError(
urllib3.exceptions.NewConnectionError: <urllib3.connection.HTTPSConnection object at 0x149fe0171b20>: Failed to establish a new connection: [Errno 111] Connection refused
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/adapters.py", line 439, in send
resp = conn.urlopen(
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 755, in urlopen
retries = retries.increment(
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/util/retry.py", line 574, in increment
raise MaxRetryError(_pool, url, error or ResponseError(cause))
urllib3.exceptions.MaxRetryError: HTTPSConnectionPool(host='metacat.fnal.gov', port=9443): Max retries exceeded with url: /dune_meta_prod/app/data/file?with_metadata=yes&with_provenance=no&with_datasets=no&name=np02vd_raw_run039324_2281_df-s05-d2_dw_0_20250907T161033.hdf5&namespace=vd-protodune (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x149fe0171b20>: Failed to establish a new connection: [Errno 111] Connection refused'))
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/runpy.py", line 197, in _run_module_as_main
return _run_code(code, main_globals, None,
File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/runpy.py", line 87, in _run_code
exec(code, run_globals)
File "/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/20943968d0063a8f11ac6a4062b5ad0c8392b138/meta_maker.py", line 48, in <module>
results = inherit_metadata.inherit(args.parent)
File "/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/20943968d0063a8f11ac6a4062b5ad0c8392b138/inherit_metadata.py", line 72, in inherit
'metadata':get_parent_md(parent_name),
File "/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/20943968d0063a8f11ac6a4062b5ad0c8392b138/inherit_metadata.py", line 27, in get_parent_md
parent_file = mc.get_file(did=parent_name, with_metadata=True,
File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 1259, in get_file
return self.get_json(url)
File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 206, in get_json
return self.unpack_json_data(self.send_request("get", uri_suffix, headers=headers, stream=True))
File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 154, in send_request
self.LastResponse = response = self.retry_request(method, url, headers=headers, **args)
File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 131, in retry_request
response = requests.get(url, timeout=self.Timeout, **args)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/api.py", line 75, in get
return request('get', url, params=params, **kwargs)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/api.py", line 61, in request
return session.request(method=method, url=url, **kwargs)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/sessions.py", line 542, in request
resp = self.send(prep, **send_kwargs)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/sessions.py", line 655, in send
r = adapter.send(request, **kwargs)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/adapters.py", line 516, in send
raise ConnectionError(e, request=request)
requests.exceptions.ConnectionError: HTTPSConnectionPool(host='metacat.fnal.gov', port=9443): Max retries exceeded with url: /dune_meta_prod/app/data/file?with_metadata=yes&with_provenance=no&with_datasets=no&name=np02vd_raw_run039324_2281_df-s05-d2_dw_0_20250907T161033.hdf5&namespace=vd-protodune (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x149fe0171b20>: Failed to establish a new connection: [Errno 111] Connection refused'))
Error in reco metadata 