Jobsub ID 40660.0@dunegpschedd02.fnal.gov
| Jobsub ID | 40660.0@dunegpschedd02.fnal.gov |
| Workflow ID | 2332 |
| Stage ID | 1 |
| User name | ykermaid@fnal.gov |
| HTCondor Group | group_dune.prod.mcsim |
| Requested | Processors | 1 |
| GPU | No |
| RSS bytes | 4193255424 (3999 MiB) |
| Wall seconds limit | 18000 (5 hours) |
| Submitted time | 2025-09-16 22:52:25 |
| Site | NL_NIKHEF |
| Entry | VIRGO_NL_NIKHEF_brug |
| Last heartbeat | 2025-09-16 23:26:55 |
| From worker node | Hostname | wn-lot-023.farm.nikhef.nl |
| cpuinfo | AMD EPYC 7702P 64-Core Processor |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 129600 (36 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | jobscript_error |
| Started | 2025-09-16 22:53:22 |
| Input files | vd-protodune:np02vd_raw_run039343_0032_df-s05-d0_dw_0_20250908T125034.hdf5
|
| Jobscript | Exit code | 1 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Max RSS bytes | 0 (0 MiB) |
| Outputting started | |
| Output files | |
| Finished | 2025-09-16 23:26:55 |
| Saved logs | justin-logs:40660.0-dunegpschedd02.fnal.gov.logs.tgz |
| List job events Cached HTCondor job logs |
Jobscript log (last 10,000 characters)
Finder: OpHitFinder:ophit@BeginModule 17-Sep-2025 01:24:34 CEST run: 39343 subRun: 1 event: 17114
Error! unrecognized channel number -1. Ignoring pulse
%MSG
%MSG-e OpHitFinder: OpHitFinder:ophit@BeginModule 17-Sep-2025 01:24:34 CEST run: 39343 subRun: 1 event: 17114
Error! unrecognized channel number -1. Ignoring pulse
%MSG
%MSG-e OpHitFinder: OpHitFinder:ophit@BeginModule 17-Sep-2025 01:24:34 CEST run: 39343 subRun: 1 event: 17114
Error! unrecognized channel number -1. Ignoring pulse
%MSG
%MSG-e OpHitFinder: OpHitFinder:ophit@BeginModule 17-Sep-2025 01:24:34 CEST run: 39343 subRun: 1 event: 17114
Error! unrecognized channel number -1. Ignoring pulse
%MSG
%MSG-e OpHitFinder: OpHitFinder:ophit@BeginModule 17-Sep-2025 01:24:34 CEST run: 39343 subRun: 1 event: 17114
Error! unrecognized channel number -1. Ignoring pulse
%MSG
RawFrameSource: got 12288 raw::RawDigit objects
input nticks=6400 keeping as is
[01:24:35.071] D [ main ] executing 1 apps, thread limit 0:
[01:24:35.071] D [ main ] executing 1 apps, thread limit 0:
[01:24:35.071] D [ main ] executing app: "Pgrapher"
[01:24:35.071] D [ pgraph ] <Pgrapher:> executing graph
[01:24:35.071] D [ pgraph ] executing with 26 nodes
[01:24:35.072] D [ glue ] <FrameFanout:nfsp> call=12: input: frame: ident=17114 time=23 tick=512 with 12288 traces. frame tags:[ "orig" ] 0 tagged trace sets:[ ] cmm:[ ] output 0: frame: ident=17114 time=23 tick=512 with 12288 traces. frame tags:[ "orig0" ] 0 tagged trace sets:[ ] cmm:[ ] output 1: frame: ident=17114 time=23 tick=512 with 12288 traces. frame tags:[ "orig1" ] 0 tagged trace sets:[ ] cmm:[ ] output 2: frame: ident=17114 time=23 tick=512 with 12288 traces. frame tags:[ "orig2" ] 0 tagged trace sets:[ ] cmm:[ ] output 3: frame: ident=17114 time=23 tick=512 with 12288 traces. frame tags:[ "orig3" ] 0 tagged trace sets:[ ] cmm:[ ] output 4: frame: ident=17114 time=23 tick=512 with 12288 traces. frame tags:[ "orig4" ] 0 tagged trace sets:[ ] cmm:[ ] output 5: frame: ident=17114 time=23 tick=512 with 12288 traces. frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] output 6: frame: ident=17114 time=23 tick=512 with 12288 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output 7: frame: ident=17114 time=23 tick=512 with 12288 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[01:24:35.073] W [ glue ] <ChannelSelector:chsel7> Untagged summary not supported, summary will be dropped.
[01:24:35.073] D [ glue ] <ChannelSelector:chsel7> input frame: ident=17114 time=23 tick=512 with 12288 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=17114 time=23 tick=512 with 1536 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[01:24:35.073] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=12 input frame: frame: ident=17114 time=23 tick=512 with 1536 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[01:24:35.073] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=12 init nticks=6400 tbinmin=0 tbinmax=6400
[01:24:35.099] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=12 load plane index: 0, ntraces=1536, input bad regions: 0
[01:24:36.623] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=12 load plane index: 1, ntraces=1536, input bad regions: 0
[01:24:38.080] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=12 load plane index: 2, ntraces=1536, input bad regions: 0
[01:25:11.730] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=12 save plane index: 0, Qtot=144792177196 Qloss=-144091059758, 5252 indices spanning [19194,24445] "wiener"
[01:25:11.909] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=12 save plane index: 0, Qtot=143096839403 Qloss=-144430610518, 4660 indices spanning [24446,29105] "gauss"
[01:25:13.146] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=12 save plane index: 1, Qtot=64544152958 Qloss=-6033133613, 14546 indices spanning [29106,43651] "wiener"
[01:25:13.319] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=12 save plane index: 1, Qtot=58819028500 Qloss=-6360613048, 14289 indices spanning [43652,57940] "gauss"
[01:25:13.635] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=12 save plane index: 2, Qtot=1687450207 Qloss=-2151972274, 9626 indices spanning [57941,67566] "wiener"
[01:25:13.964] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=12 save plane index: 2, Qtot=1345392334 Qloss=-1812180253, 11207 indices spanning [67567,78773] "gauss"
[01:25:13.964] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=12 produce 78774 traces: 29424 wiener7, 0 decon_charge7, 30156 gauss7, frame tag: sigproc
[01:25:13.964] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=12 output frame: frame: ident=17114 time=23 tick=512 with 78774 traces. frame tags:[ "sigproc" ] 4 tagged trace sets:[ "gauss7":30156 [0] "mp2_roi7":13968 [0] "mp3_roi7":5226 [0] "wiener7":29424 [29424] ] cmm:[ ]
[01:25:18.200] W [ glue ] <ChannelSelector:chsel6> Untagged summary not supported, summary will be dropped.
[01:25:18.200] D [ glue ] <ChannelSelector:chsel6> input frame: ident=17114 time=23 tick=512 with 12288 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=17114 time=23 tick=512 with 1536 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ]
[01:25:18.201] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=12 input frame: frame: ident=17114 time=23 tick=512 with 1536 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ]
[01:25:18.201] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=12 init nticks=6400 tbinmin=0 tbinmax=6400
[01:25:18.226] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=12 load plane index: 0, ntraces=1536, input bad regions: 0
[01:25:19.905] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=12 load plane index: 1, ntraces=1536, input bad regions: 0
[01:25:21.533] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=12 load plane index: 2, ntraces=1536, input bad regions: 0
==================================================================================================================================
TimeTracker printout (sec) Min Avg Max Median RMS nEvts
==================================================================================================================================
Full event 7.9128e-05 260.2 988.178 185.293 304.497 7
----------------------------------------------------------------------------------------------------------------------------------
source:HDF5RawInput3(read) 6.2367e-05 9.60587e-05 0.000226114 7.7566e-05 5.34651e-05 7
produce:tpcrawdecoder:PDVDTPCReader 11.4395 12.0303 14.9154 11.527 1.18329 7
produce:triggerrawdecoder:PDVDTriggerReader4 0.520795 0.534968 0.558018 0.533338 0.0133687 7
produce:pdvddaphne:DAPHNEReaderPDVD 2.41204 2.6072 2.92314 2.62356 0.152858 7
produce:ophit:OpHitFinder 0.0403804 0.0440756 0.0492124 0.0438025 0.00268575 7
produce:opflash:OpFlashFinderVerticalDrift 0.00894995 0.0126993 0.0170426 0.0134737 0.0026667 7
produce:wclsdatavd:WireCellToolkit 47.031 66.7665 99.338 54.117 21.9998 6
produce:gaushit:GausHitFinder 0.946153 2.06207 5.80567 1.47577 1.69261 6
produce:nhitsfilter:NumberOfHitsFilter 0.000385092 0.000761797 0.00115949 0.000731392 0.000283468 6
produce:reco3d:SpacePointSolver 10.1946 16.6769 27.6899 16.1107 5.78351 6
produce:hitpdune:DisambigFromSpacePoints 0.136182 0.238822 0.466355 0.223083 0.108893 6
produce:pandora:StandardPandora 33.6903 197.141 833.935 82.3897 286.115 6
produce:pandoraTrack:LArPandoraTrackCreation 0.422359 0.86647 1.3122 0.875199 0.342162 6
produce:pandoraGnocalo:GnocchiCalorimetry 0.0242648 0.0330882 0.0454784 0.0314903 0.00779639 6
[art]:TriggerResults:TriggerResultInserter 1.9256e-05 2.9916e-05 6.415e-05 2.2537e-05 1.58793e-05 6
end_path:out1:RootOutput 4.458e-06 9.51767e-06 2.6209e-05 5.1095e-06 7.80782e-06 6
end_path:out1:RootOutput(write) 3.82153 4.46612 5.71658 4.22511 0.654875 6
==================================================================================================================================
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 8589.86 MB
Peak resident set size usage (VmHWM): 6707.93 MB
Details saved in: 'mem.db'
====================================================================================================
%MSG-s ArtException: PostEndJob 17-Sep-2025 01:26:36 CEST ModuleEndJob
---- EventProcessorFailure BEGIN
EventProcessor: an exception occurred during current event processing
---- ScheduleExecutionFailure BEGIN
Path: ProcessingStopped.
---- BadAlloc BEGIN
A bad_alloc exception was thrown while processing module WireCellToolkit/wclsdatavd run: 39343 subRun: 1 event: 17114
The job has probably exhausted the virtual memory available to the process.
---- BadAlloc END
Exception going through path produce
---- ScheduleExecutionFailure END
---- EventProcessorFailure END
%MSG
Art has completed and will exit with status 1.
Error in reco1 