justIN           Dashboard       Workflows       Jobs       AWT       Sites       Storages       Docs       Login

Jobsub ID 40761.0@dunegpschedd02.fnal.gov

Jobsub ID40761.0@dunegpschedd02.fnal.gov
Workflow ID2644
Stage ID1
User nameykermaid@fnal.gov
HTCondor Groupgroup_dune.prod_mcsim
RequestedProcessors1
GPUNo
RSS bytes4193255424 (3999 MiB)
Wall seconds limit18000 (5 hours)
Submitted time2025-09-17 02:48:41
SiteNL_NIKHEF
EntryVIRGO_NL_NIKHEF_klomp
Last heartbeat2025-09-17 02:58:33
From worker nodeHostnamewn-snel-010.farm.nikhef.nl
cpuinfoAMD EPYC 7H12 64-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit129600 (36 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-09-17 02:50:02
Input filesvd-protodune:np02vd_raw_run039353_1005_df-s05-d3_dw_0_20250916T120858.hdf5
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-09-17 02:58:33
Saved logsjustin-logs:40761.0-dunegpschedd02.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

ted, summary will be dropped. 
[04:56:42.427] D [  glue  ] <ChannelSelector:chsel7> input frame: ident=77367 time=4 tick=512 with 12288 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=77367 time=4 tick=512 with 1536 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] 
[04:56:42.427] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=2 input frame: frame: ident=77367 time=4 tick=512 with 1536 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] 
[04:56:42.427] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=2 init nticks=10000 tbinmin=0 tbinmax=10000 
[04:56:42.481] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=2 load plane index: 0, ntraces=1536, input bad regions: 0 
[04:56:45.217] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=2 load plane index: 1, ntraces=1536, input bad regions: 0 
[04:56:47.563] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=2 load plane index: 2, ntraces=1536, input bad regions: 0 
[04:56:51.222] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=2 save plane index: 0, Qtot=106024167 Qloss=-13861091, 3081 indices spanning [12995,16075] "wiener" 
[04:56:51.460] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=2 save plane index: 0, Qtot=100892865 Qloss=-10558875, 2544 indices spanning [16076,18619] "gauss" 
[04:56:51.912] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=2 save plane index: 1, Qtot=105257155 Qloss=-14760066, 3462 indices spanning [18620,22081] "wiener" 
[04:56:52.152] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=2 save plane index: 1, Qtot=97848788 Qloss=-11303747, 2798 indices spanning [22082,24879] "gauss" 
[04:56:52.551] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=2 save plane index: 2, Qtot=100136502 Qloss=-7988728, 3776 indices spanning [24880,28655] "wiener" 
[04:56:52.941] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=2 save plane index: 2, Qtot=96523520 Qloss=-4278502, 3164 indices spanning [28656,31819] "gauss" 
[04:56:52.943] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=2 produce 31820 traces: 10319 wiener7, 0 decon_charge7, 8506 gauss7, frame tag: sigproc 
[04:56:52.943] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=2 output frame: frame: ident=77367 time=4 tick=512 with 31820 traces.  frame tags:[ "sigproc" ] 4 tagged trace sets:[ "gauss7":8506 [0] "mp2_roi7":10595 [0] "mp3_roi7":2400 [0] "wiener7":10319 [10319] ] cmm:[ ] 
[04:56:53.019] W [  glue  ] <ChannelSelector:chsel6> Untagged summary not supported, summary will be dropped. 
[04:56:53.020] D [  glue  ] <ChannelSelector:chsel6> input frame: ident=77367 time=4 tick=512 with 12288 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=77367 time=4 tick=512 with 1536 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] 
[04:56:53.020] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=2 input frame: frame: ident=77367 time=4 tick=512 with 1536 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] 
[04:56:53.020] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=2 init nticks=10000 tbinmin=0 tbinmax=10000 
[04:56:53.058] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=2 load plane index: 0, ntraces=1536, input bad regions: 0 
[04:56:55.250] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=2 load plane index: 1, ntraces=1536, input bad regions: 0 
[04:56:57.483] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=2 load plane index: 2, ntraces=1536, input bad regions: 0 
[04:57:01.045] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=2 save plane index: 0, Qtot=116305841 Qloss=-14257486, 2960 indices spanning [17050,20009] "wiener" 
[04:57:01.289] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=2 save plane index: 0, Qtot=109298468 Qloss=-12008097, 2386 indices spanning [20010,22395] "gauss" 
[04:57:01.695] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=2 save plane index: 1, Qtot=114948793 Qloss=-14611353, 3579 indices spanning [22396,25974] "wiener" 
[04:57:01.948] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=2 save plane index: 1, Qtot=104821134 Qloss=-11427851, 2896 indices spanning [25975,28870] "gauss" 
[04:57:02.345] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=2 save plane index: 2, Qtot=116245827 Qloss=-9348207, 4480 indices spanning [28871,33350] "wiener" 
[04:57:02.745] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=2 save plane index: 2, Qtot=111386743 Qloss=-4332912, 3702 indices spanning [33351,37052] "gauss" 
[04:57:02.748] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=2 produce 37053 traces: 11019 wiener6, 0 decon_charge6, 8984 gauss6, frame tag: sigproc 
[04:57:02.748] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=2 output frame: frame: ident=77367 time=4 tick=512 with 37053 traces.  frame tags:[ "sigproc" ] 4 tagged trace sets:[ "gauss6":8984 [0] "mp2_roi6":14426 [0] "mp3_roi6":2624 [0] "wiener6":11019 [11019] ] cmm:[ ] 
[04:57:02.837] W [  glue  ] <ChannelSelector:chsel5> Untagged summary not supported, summary will be dropped. 
[04:57:02.838] D [  glue  ] <ChannelSelector:chsel5> input frame: ident=77367 time=4 tick=512 with 12288 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=77367 time=4 tick=512 with 1536 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] 
[04:57:02.838] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=2 input frame: frame: ident=77367 time=4 tick=512 with 1536 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] 
[04:57:02.838] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=2 init nticks=10000 tbinmin=0 tbinmax=10000 
[04:57:02.871] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=2 load plane index: 0, ntraces=1536, input bad regions: 0 
[04:57:05.018] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=2 load plane index: 1, ntraces=1536, input bad regions: 0 
[04:57:07.297] D [sigproc ] <OmnibusSigProc:anode5sigproc5> call=2 load plane index: 2, ntraces=1536, input bad regions: 0 

==================================================================================================================================
TimeTracker printout (sec)                          Min           Avg           Max         Median          RMS         nEvts   
==================================================================================================================================
Full event                                      9.3646e-05      112.113       224.225       112.113       112.113         2     
----------------------------------------------------------------------------------------------------------------------------------
source:HDF5RawInput3(read)                      9.3646e-05    0.00023692    0.000380194   0.00023692    0.000143274       2     
produce:tpcrawdecoder:PDVDTPCReader               95.439        113.922       132.405       113.922       18.483          2     
produce:triggerrawdecoder:PDVDTriggerReader4     0.339088      0.420313      0.501539      0.420313      0.0812255        2     
produce:pdvddaphne:DAPHNEReaderPDVD             0.000529223   0.000817179   0.00110514    0.000817179   0.000287957       2     
produce:ophit:OpHitFinder                       0.000385383   0.000854359   0.00132333    0.000854359   0.000468976       2     
produce:opflash:OpFlashFinderVerticalDrift      7.1274e-05    0.000306535   0.000541797   0.000306535   0.000235262       2     
produce:wclsdatavd:WireCellToolkit                72.9474       72.9474       72.9474       72.9474          0            1     
produce:gaushit:GausHitFinder                     1.08386       1.08386       1.08386       1.08386          0            1     
produce:nhitsfilter:NumberOfHitsFilter          0.00113352    0.00113352    0.00113352    0.00113352         0            1     
produce:reco3d:SpacePointSolver                   9.29132       9.29132       9.29132       9.29132          0            1     
produce:hitpdune:DisambigFromSpacePoints         0.144208      0.144208      0.144208      0.144208          0            1     
produce:pandora:StandardPandora                   39.4497       39.4497       39.4497       39.4497          0            1     
produce:pandoraTrack:LArPandoraTrackCreation     0.891339      0.891339      0.891339      0.891339          0            1     
produce:pandoraGnocalo:GnocchiCalorimetry        0.0349124     0.0349124     0.0349124     0.0349124         0            1     
[art]:TriggerResults:TriggerResultInserter      0.000171152   0.000171152   0.000171152   0.000171152        0            1     
end_path:out1:RootOutput                         4.237e-05     4.237e-05     4.237e-05     4.237e-05         0            1     
end_path:out1:RootOutput(write)                   4.56504       4.56504       4.56504       4.56504          0            1     
==================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 8589.81 MB
  Peak resident set size usage (VmHWM): 6709.94 MB
  Details saved in: 'mem.db'
====================================================================================================
%MSG-s ArtException:  PostEndJob 17-Sep-2025 04:58:11 CEST ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- ScheduleExecutionFailure BEGIN
    Path: ProcessingStopped.
    ---- BadAlloc BEGIN
      A bad_alloc exception was thrown while processing module WireCellToolkit/wclsdatavd run: 39353 subRun: 1 event: 77367
      The job has probably exhausted the virtual memory available to the process.
    ---- BadAlloc END
    Exception going through path produce
  ---- ScheduleExecutionFailure END
---- EventProcessorFailure END
%MSG
Art has completed and will exit with status 1.
Error in reco1
justIN time: 2025-09-18 21:54:10 UTC       justIN version: 01.05.00