Jobsub ID 43107.45@dunegpschedd01.fnal.gov
| Jobsub ID | 43107.45@dunegpschedd01.fnal.gov |
| Workflow ID | 2332 |
| Stage ID | 1 |
| User name | ykermaid@fnal.gov |
| HTCondor Group | group_dune.prod.mcsim |
| Requested | Processors | 1 |
| GPU | No |
| RSS bytes | 4193255424 (3999 MiB) |
| Wall seconds limit | 18000 (5 hours) |
| Submitted time | 2025-09-08 13:38:15 |
| Site | NL_NIKHEF |
| Entry | VIRGO_NL_NIKHEF_klomp |
| Last heartbeat | 2025-09-08 15:52:31 |
| From worker node | Hostname | wn-sate-050.farm.nikhef.nl |
| cpuinfo | AMD EPYC 7551P 32-Core Processor |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 129600 (36 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | outputting_failed |
| Started | 2025-09-08 15:45:35 |
| Input files | vd-protodune:np02vd_raw_run039338_0005_df-s05-d1_dw_0_20250908T113640.hdf5
|
| Jobscript | Exit code | 1 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Max RSS bytes | 0 (0 MiB) |
| Outputting started | |
| Output files | |
| Finished | 2025-09-08 15:52:31 |
| List job events Cached HTCondor job logs |
Jobscript log (last 10,000 characters)
reCell::IFrameFanin inputs:[ WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:4)
[17:46:10.763] D [ pgraph ] connect <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::Gen::FrameFanin cat:7 sig:WireCell::IFrameFanin inputs:[ WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:5)
[17:46:10.763] D [ pgraph ] connect <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::Gen::FrameFanin cat:7 sig:WireCell::IFrameFanin inputs:[ WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:6)
[17:46:10.763] D [ pgraph ] connect <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::Gen::FrameFanin cat:7 sig:WireCell::IFrameFanin inputs:[ WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:7)
[17:46:10.763] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[17:46:10.763] D [ pgraph ] connect <Node type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[17:46:10.763] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[17:46:10.763] D [ pgraph ] connect <Node type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[17:46:10.764] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[17:46:10.764] D [ pgraph ] connect <Node type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[17:46:10.764] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[17:46:10.764] D [ pgraph ] connect <Node type:WireCell::Aux::Resampler cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[17:46:10.764] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[17:46:10.764] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[17:46:10.764] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
[17:46:10.764] D [ pgraph ] connect <Node type:WireCell::SigProc::ChannelSelector cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ]:(WireCell::IFrame:0) -> <Node type:WireCell::SigProc::OmnibusSigProc cat:3 sig:WireCell::IFrameFilter inputs:[ WireCell::IFrame ] outputs:[ WireCell::IFrame ](WireCell::IFrame:0)
Inputer: "wclsRawFrameSource"
Outputer: "wclsFrameSaver:spsaver"
wclsFrameSaver: promising to produce recob::Wires named "gauss"
wclsFrameSaver: promising to produce recob::Wires named "wiener"
db: runtime1757331394
Scale HitLimit based on readout window size 10000
HitLimit = 33333
RawFrameSource: got 12288 raw::RawDigit objects
input nticks=6400 keeping as is
[17:46:28.364] D [ main ] executing 1 apps, thread limit 0:
[17:46:28.364] D [ main ] executing 1 apps, thread limit 0:
[17:46:28.364] D [ main ] executing app: "Pgrapher"
[17:46:28.364] D [ pgraph ] <Pgrapher:> executing graph
[17:46:28.364] D [ pgraph ] executing with 26 nodes
[17:46:28.366] D [ glue ] <FrameFanout:nfsp> call=0: input: frame: ident=3155 time=0 tick=512 with 12288 traces. frame tags:[ "orig" ] 0 tagged trace sets:[ ] cmm:[ ] output 0: frame: ident=3155 time=0 tick=512 with 12288 traces. frame tags:[ "orig0" ] 0 tagged trace sets:[ ] cmm:[ ] output 1: frame: ident=3155 time=0 tick=512 with 12288 traces. frame tags:[ "orig1" ] 0 tagged trace sets:[ ] cmm:[ ] output 2: frame: ident=3155 time=0 tick=512 with 12288 traces. frame tags:[ "orig2" ] 0 tagged trace sets:[ ] cmm:[ ] output 3: frame: ident=3155 time=0 tick=512 with 12288 traces. frame tags:[ "orig3" ] 0 tagged trace sets:[ ] cmm:[ ] output 4: frame: ident=3155 time=0 tick=512 with 12288 traces. frame tags:[ "orig4" ] 0 tagged trace sets:[ ] cmm:[ ] output 5: frame: ident=3155 time=0 tick=512 with 12288 traces. frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] output 6: frame: ident=3155 time=0 tick=512 with 12288 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output 7: frame: ident=3155 time=0 tick=512 with 12288 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[17:46:28.366] W [ glue ] <ChannelSelector:chsel7> Untagged summary not supported, summary will be dropped.
[17:46:28.367] D [ glue ] <ChannelSelector:chsel7> input frame: ident=3155 time=0 tick=512 with 12288 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=3155 time=0 tick=512 with 1536 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[17:46:28.367] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 input frame: frame: ident=3155 time=0 tick=512 with 1536 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[17:46:28.367] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 init nticks=6400 tbinmin=0 tbinmax=6400
[17:46:28.427] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 0, ntraces=1536, input bad regions: 0
[17:46:29.528] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 1, ntraces=1536, input bad regions: 0
[17:46:30.623] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=0 load plane index: 2, ntraces=1536, input bad regions: 0
08-Sep-2025 17:47:39 CEST Opened output file with pattern "%ifb_reco_stage1_%tc_keepup.root"
Malformed TimeTracker database. The TimeEvent table is empty, but
the TimeModule table is not. This can happen if an exception has
been thrown from a module while processing the first event. Any
saved database file is suspect and should not be used.
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 8589.83 MB
Peak resident set size usage (VmHWM): 6586.39 MB
Details saved in: 'mem.db'
====================================================================================================
%MSG-s ArtException: PostEndJob 08-Sep-2025 17:47:41 CEST ModuleEndJob
---- EventProcessorFailure BEGIN
EventProcessor: an exception occurred during current event processing
---- ScheduleExecutionFailure BEGIN
Path: ProcessingStopped.
---- BadAlloc BEGIN
A bad_alloc exception was thrown while processing module WireCellToolkit/wclsdatavd run: 39338 subRun: 1 event: 3155
The job has probably exhausted the virtual memory available to the process.
---- BadAlloc END
Exception going through path produce
---- ScheduleExecutionFailure END
---- EventProcessorFailure END
%MSG
Art has completed and will exit with status 1.
Error in reco1 