Jobsub ID 47052.2@dunegpschedd01.fnal.gov
| Jobsub ID | 47052.2@dunegpschedd01.fnal.gov |
| Workflow ID | 2332 |
| Stage ID | 1 |
| User name | ykermaid@fnal.gov |
| HTCondor Group | group_dune.prod.mcsim |
| Requested | Processors | 1 |
| GPU | No |
| RSS bytes | 4193255424 (3999 MiB) |
| Wall seconds limit | 18000 (5 hours) |
| Submitted time | 2025-09-16 16:42:07 |
| Site | NL_NIKHEF |
| Entry | VIRGO_NL_NIKHEF_juk |
| Last heartbeat | 2025-09-16 17:15:06 |
| From worker node | Hostname | wn-snel-022.farm.nikhef.nl |
| cpuinfo | AMD EPYC 7H12 64-Core Processor |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 129600 (36 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | jobscript_error |
| Started | 2025-09-16 16:42:58 |
| Input files | vd-protodune:np02vd_raw_run039343_0032_df-s02-d0_dw_0_20250908T125035.hdf5
|
| Jobscript | Exit code | 1 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Max RSS bytes | 0 (0 MiB) |
| Outputting started | |
| Output files | |
| Finished | 2025-09-16 17:15:06 |
| Saved logs | justin-logs:47052.2-dunegpschedd01.fnal.gov.logs.tgz |
| List job events Cached HTCondor job logs |
Jobscript log (last 10,000 characters)
OpHitFinder: OpHitFinder:ophit@BeginModule 16-Sep-2025 19:12:23 CEST run: 39343 subRun: 1 event: 17122
Error! unrecognized channel number -1. Ignoring pulse
%MSG
%MSG-e OpHitFinder: OpHitFinder:ophit@BeginModule 16-Sep-2025 19:12:23 CEST run: 39343 subRun: 1 event: 17122
Error! unrecognized channel number -1. Ignoring pulse
%MSG
%MSG-e OpHitFinder: OpHitFinder:ophit@BeginModule 16-Sep-2025 19:12:23 CEST run: 39343 subRun: 1 event: 17122
Error! unrecognized channel number -1. Ignoring pulse
%MSG
%MSG-e OpHitFinder: OpHitFinder:ophit@BeginModule 16-Sep-2025 19:12:23 CEST run: 39343 subRun: 1 event: 17122
Error! unrecognized channel number -1. Ignoring pulse
%MSG
%MSG-e OpHitFinder: OpHitFinder:ophit@BeginModule 16-Sep-2025 19:12:23 CEST run: 39343 subRun: 1 event: 17122
Error! unrecognized channel number -1. Ignoring pulse
%MSG
RawFrameSource: got 12288 raw::RawDigit objects
input nticks=6400 keeping as is
[19:12:23.671] D [ main ] executing 1 apps, thread limit 0:
[19:12:23.671] D [ main ] executing 1 apps, thread limit 0:
[19:12:23.671] D [ main ] executing app: "Pgrapher"
[19:12:23.671] D [ pgraph ] <Pgrapher:> executing graph
[19:12:23.671] D [ pgraph ] executing with 26 nodes
[19:12:23.673] D [ glue ] <FrameFanout:nfsp> call=10: input: frame: ident=17122 time=18 tick=512 with 12288 traces. frame tags:[ "orig" ] 0 tagged trace sets:[ ] cmm:[ ] output 0: frame: ident=17122 time=18 tick=512 with 12288 traces. frame tags:[ "orig0" ] 0 tagged trace sets:[ ] cmm:[ ] output 1: frame: ident=17122 time=18 tick=512 with 12288 traces. frame tags:[ "orig1" ] 0 tagged trace sets:[ ] cmm:[ ] output 2: frame: ident=17122 time=18 tick=512 with 12288 traces. frame tags:[ "orig2" ] 0 tagged trace sets:[ ] cmm:[ ] output 3: frame: ident=17122 time=18 tick=512 with 12288 traces. frame tags:[ "orig3" ] 0 tagged trace sets:[ ] cmm:[ ] output 4: frame: ident=17122 time=18 tick=512 with 12288 traces. frame tags:[ "orig4" ] 0 tagged trace sets:[ ] cmm:[ ] output 5: frame: ident=17122 time=18 tick=512 with 12288 traces. frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] output 6: frame: ident=17122 time=18 tick=512 with 12288 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output 7: frame: ident=17122 time=18 tick=512 with 12288 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[19:12:23.673] W [ glue ] <ChannelSelector:chsel7> Untagged summary not supported, summary will be dropped.
[19:12:23.673] D [ glue ] <ChannelSelector:chsel7> input frame: ident=17122 time=18 tick=512 with 12288 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=17122 time=18 tick=512 with 1536 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[19:12:23.674] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=10 input frame: frame: ident=17122 time=18 tick=512 with 1536 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[19:12:23.674] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=10 init nticks=6400 tbinmin=0 tbinmax=6400
[19:12:23.709] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=10 load plane index: 0, ntraces=1536, input bad regions: 0
[19:12:25.189] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=10 load plane index: 1, ntraces=1536, input bad regions: 0
[19:12:26.523] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=10 load plane index: 2, ntraces=1536, input bad regions: 0
[19:13:10.967] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=10 save plane index: 0, Qtot=74975412240 Qloss=-5726414939, 3893 indices spanning [14689,18581] "wiener"
[19:13:11.118] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=10 save plane index: 0, Qtot=73395012679 Qloss=-5797995178, 3673 indices spanning [18582,22254] "gauss"
[19:13:12.313] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=10 save plane index: 1, Qtot=90036031148 Qloss=-6709332296, 12679 indices spanning [22255,34933] "wiener"
[19:13:12.473] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=10 save plane index: 1, Qtot=82868001708 Qloss=-7339796876, 11764 indices spanning [34934,46697] "gauss"
[19:13:12.764] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=10 save plane index: 2, Qtot=2455891623 Qloss=-3909872311, 11266 indices spanning [46698,57963] "wiener"
[19:13:13.057] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=10 save plane index: 2, Qtot=1905327210 Qloss=-3361864078, 12632 indices spanning [57964,70595] "gauss"
[19:13:13.057] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=10 produce 70596 traces: 27838 wiener7, 0 decon_charge7, 28069 gauss7, frame tag: sigproc
[19:13:13.057] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=10 output frame: frame: ident=17122 time=18 tick=512 with 70596 traces. frame tags:[ "sigproc" ] 4 tagged trace sets:[ "gauss7":28069 [0] "mp2_roi7":10107 [0] "mp3_roi7":4582 [0] "wiener7":27838 [27838] ] cmm:[ ]
[19:13:22.391] W [ glue ] <ChannelSelector:chsel6> Untagged summary not supported, summary will be dropped.
[19:13:22.392] D [ glue ] <ChannelSelector:chsel6> input frame: ident=17122 time=18 tick=512 with 12288 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=17122 time=18 tick=512 with 1536 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ]
[19:13:22.392] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=10 input frame: frame: ident=17122 time=18 tick=512 with 1536 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ]
[19:13:22.392] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=10 init nticks=6400 tbinmin=0 tbinmax=6400
[19:13:22.416] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=10 load plane index: 0, ntraces=1536, input bad regions: 0
[19:13:23.799] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=10 load plane index: 1, ntraces=1536, input bad regions: 0
[19:13:25.196] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=10 load plane index: 2, ntraces=1536, input bad regions: 0
==================================================================================================================================
TimeTracker printout (sec) Min Avg Max Median RMS nEvts
==================================================================================================================================
Full event 6.6094e-05 277.165 766.22 218.798 235.523 6
----------------------------------------------------------------------------------------------------------------------------------
source:HDF5RawInput3(read) 5.6466e-05 8.7461e-05 0.000184917 7.178e-05 4.39683e-05 6
produce:tpcrawdecoder:PDVDTPCReader 52.5736 78.9213 114.102 72.2679 22.0561 6
produce:triggerrawdecoder:PDVDTriggerReader4 0.53859 0.570265 0.618803 0.571769 0.0273899 6
produce:pdvddaphne:DAPHNEReaderPDVD 7.13282 10.5441 12.1946 10.8842 1.62542 6
produce:ophit:OpHitFinder 0.0460958 0.060063 0.0690159 0.0620148 0.00768627 6
produce:opflash:OpFlashFinderVerticalDrift 0.00838749 0.015498 0.0202366 0.0160247 0.00365762 6
produce:wclsdatavd:WireCellToolkit 39.5392 58.9896 81.6108 65.0819 16.3233 5
produce:gaushit:GausHitFinder 0.882298 1.54264 3.36673 1.10783 0.926134 5
produce:nhitsfilter:NumberOfHitsFilter 0.000254859 0.000353069 0.000434926 0.000347282 7.04524e-05 5
produce:reco3d:SpacePointSolver 9.66409 14.1417 21.7052 12.3323 4.25707 5
produce:hitpdune:DisambigFromSpacePoints 0.116249 0.187863 0.305079 0.174586 0.0638942 5
produce:pandora:StandardPandora 30.708 158.583 589.916 65.1363 216.223 5
produce:pandoraTrack:LArPandoraTrackCreation 0.593109 0.722035 0.840849 0.744124 0.0986871 5
produce:pandoraGnocalo:GnocchiCalorimetry 0.0216386 0.0241154 0.0261906 0.0238574 0.00163406 5
[art]:TriggerResults:TriggerResultInserter 1.4247e-05 2.0831e-05 4.4413e-05 1.5549e-05 1.18064e-05 5
end_path:out1:RootOutput 3.306e-06 6.4382e-06 1.7503e-05 3.687e-06 5.53699e-06 5
end_path:out1:RootOutput(write) 3.20714 3.83185 4.67241 3.57903 0.611933 5
==================================================================================================================================
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 8589.91 MB
Peak resident set size usage (VmHWM): 6710.17 MB
Details saved in: 'mem.db'
====================================================================================================
%MSG-s ArtException: PostEndJob 16-Sep-2025 19:14:47 CEST ModuleEndJob
---- EventProcessorFailure BEGIN
EventProcessor: an exception occurred during current event processing
---- ScheduleExecutionFailure BEGIN
Path: ProcessingStopped.
---- BadAlloc BEGIN
A bad_alloc exception was thrown while processing module WireCellToolkit/wclsdatavd run: 39343 subRun: 1 event: 17122
The job has probably exhausted the virtual memory available to the process.
---- BadAlloc END
Exception going through path produce
---- ScheduleExecutionFailure END
---- EventProcessorFailure END
%MSG
Art has completed and will exit with status 1.
Error in reco1 