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Jobsub ID 47405.0@dunegpschedd01.fnal.gov

Jobsub ID47405.0@dunegpschedd01.fnal.gov
Workflow ID2576
Stage ID1
User nameykermaid@fnal.gov
HTCondor Groupgroup_dune.prod_mcsim
RequestedProcessors1
GPUNo
RSS bytes4193255424 (3999 MiB)
Wall seconds limit18000 (5 hours)
Submitted time2025-09-17 08:00:56
SiteNL_NIKHEF
EntryVIRGO_NL_NIKHEF_dissel
Last heartbeat2025-09-17 08:43:38
From worker nodeHostnamewn-lot-027.farm.nikhef.nl
cpuinfoAMD EPYC 7702P 64-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit129600 (36 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-09-17 08:01:45
Input filesvd-protodune:np02vd_raw_run039275_0094_df-s03-d3_dw_0_20250901T181110.hdf5
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-09-17 08:43:38
Saved logsjustin-logs:47405.0-dunegpschedd01.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

lse
%MSG
%MSG-e OpHitFinder:  OpHitFinder:ophit@BeginModule 17-Sep-2025 10:33:30 CEST  run: 39275 subRun: 1 event: 33929
Error! unrecognized channel number -1. Ignoring pulse
%MSG
%MSG-e OpHitFinder:  OpHitFinder:ophit@BeginModule 17-Sep-2025 10:33:30 CEST  run: 39275 subRun: 1 event: 33929
Error! unrecognized channel number -1. Ignoring pulse
%MSG
%MSG-e OpHitFinder:  OpHitFinder:ophit@BeginModule 17-Sep-2025 10:33:30 CEST  run: 39275 subRun: 1 event: 33929
Error! unrecognized channel number -1. Ignoring pulse
%MSG
%MSG-e OpHitFinder:  OpHitFinder:ophit@BeginModule 17-Sep-2025 10:33:30 CEST  run: 39275 subRun: 1 event: 33929
Error! unrecognized channel number -1. Ignoring pulse
%MSG
%MSG-e OpHitFinder:  OpHitFinder:ophit@BeginModule 17-Sep-2025 10:33:30 CEST  run: 39275 subRun: 1 event: 33929
Error! unrecognized channel number -1. Ignoring pulse
%MSG
RawFrameSource: got 12288 raw::RawDigit objects
	input nticks=10000 keeping as is
[10:33:30.623] D [  main  ] executing 1 apps, thread limit 0:
[10:33:30.623] D [  main  ] executing 1 apps, thread limit 0:
[10:33:30.623] D [  main  ] executing app: "Pgrapher"
[10:33:30.623] D [ pgraph ] <Pgrapher:> executing graph 
[10:33:30.623] D [ pgraph ] executing with 26 nodes
[10:33:30.624] D [  glue  ] <FrameFanout:nfsp> call=8: input: frame: ident=33929 time=23 tick=512 with 12288 traces.  frame tags:[ "orig" ] 0 tagged trace sets:[ ] cmm:[ ] output 0: frame: ident=33929 time=23 tick=512 with 12288 traces.  frame tags:[ "orig0" ] 0 tagged trace sets:[ ] cmm:[ ] output 1: frame: ident=33929 time=23 tick=512 with 12288 traces.  frame tags:[ "orig1" ] 0 tagged trace sets:[ ] cmm:[ ] output 2: frame: ident=33929 time=23 tick=512 with 12288 traces.  frame tags:[ "orig2" ] 0 tagged trace sets:[ ] cmm:[ ] output 3: frame: ident=33929 time=23 tick=512 with 12288 traces.  frame tags:[ "orig3" ] 0 tagged trace sets:[ ] cmm:[ ] output 4: frame: ident=33929 time=23 tick=512 with 12288 traces.  frame tags:[ "orig4" ] 0 tagged trace sets:[ ] cmm:[ ] output 5: frame: ident=33929 time=23 tick=512 with 12288 traces.  frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] output 6: frame: ident=33929 time=23 tick=512 with 12288 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output 7: frame: ident=33929 time=23 tick=512 with 12288 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]  
[10:33:30.624] W [  glue  ] <ChannelSelector:chsel7> Untagged summary not supported, summary will be dropped. 
[10:33:30.625] D [  glue  ] <ChannelSelector:chsel7> input frame: ident=33929 time=23 tick=512 with 12288 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=33929 time=23 tick=512 with 1536 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] 
[10:33:30.625] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=8 input frame: frame: ident=33929 time=23 tick=512 with 1536 traces.  frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] 
[10:33:30.625] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=8 init nticks=10000 tbinmin=0 tbinmax=10000 
[10:33:30.655] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=8 load plane index: 0, ntraces=1536, input bad regions: 0 
[10:33:32.353] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=8 load plane index: 1, ntraces=1536, input bad regions: 0 
[10:33:34.290] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=8 load plane index: 2, ntraces=1536, input bad regions: 0 
[10:34:13.308] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=8 save plane index: 0, Qtot=99367238328 Qloss=-1913033995, 7431 indices spanning [50007,57437] "wiener" 
[10:34:13.506] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=8 save plane index: 0, Qtot=99266646181 Qloss=-1924521084, 5980 indices spanning [57438,63417] "gauss" 
[10:34:14.489] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=8 save plane index: 1, Qtot=2181966003 Qloss=-328915940, 17624 indices spanning [63418,81041] "wiener" 
[10:34:14.692] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=8 save plane index: 1, Qtot=1985145432 Qloss=-320987379, 14143 indices spanning [81042,95184] "gauss" 
[10:34:15.126] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=8 save plane index: 2, Qtot=1422127204 Qloss=-37860298, 13697 indices spanning [95185,108881] "wiener" 
[10:34:15.548] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=8 save plane index: 2, Qtot=1393566003 Qloss=-17321315, 10762 indices spanning [108882,119643] "gauss" 
[10:34:15.548] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=8 produce 119644 traces: 38752 wiener7, 0 decon_charge7, 30885 gauss7, frame tag: sigproc 
[10:34:15.549] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=8 output frame: frame: ident=33929 time=23 tick=512 with 119644 traces.  frame tags:[ "sigproc" ] 4 tagged trace sets:[ "gauss7":30885 [0] "mp2_roi7":34688 [0] "mp3_roi7":15319 [0] "wiener7":38752 [38752] ] cmm:[ ] 
[10:34:20.613] W [  glue  ] <ChannelSelector:chsel6> Untagged summary not supported, summary will be dropped. 
[10:34:20.613] D [  glue  ] <ChannelSelector:chsel6> input frame: ident=33929 time=23 tick=512 with 12288 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=33929 time=23 tick=512 with 1536 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] 
[10:34:20.614] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=8 input frame: frame: ident=33929 time=23 tick=512 with 1536 traces.  frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] 
[10:34:20.614] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=8 init nticks=10000 tbinmin=0 tbinmax=10000 
[10:34:20.644] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=8 load plane index: 0, ntraces=1536, input bad regions: 0 
[10:34:22.575] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=8 load plane index: 1, ntraces=1536, input bad regions: 0 
[10:34:24.632] D [sigproc ] <OmnibusSigProc:anode6sigproc6> call=8 load plane index: 2, ntraces=1536, input bad regions: 0 

==================================================================================================================================
TimeTracker printout (sec)                          Min           Avg           Max         Median          RMS         nEvts   
==================================================================================================================================
Full event                                      6.6705e-05      332.912       466.812       402.364       168.614         5     
----------------------------------------------------------------------------------------------------------------------------------
source:HDF5RawInput3(read)                      6.5082e-05     8.857e-05    0.00017657    6.6966e-05    4.40075e-05       5     
produce:tpcrawdecoder:PDVDTPCReader               187.615       198.303       213.784       195.583       10.1497         5     
produce:triggerrawdecoder:PDVDTriggerReader4     0.0344132     0.0374068     0.047863      0.0346841    0.00524294        5     
produce:pdvddaphne:DAPHNEReaderPDVD               18.5364       22.6764       25.6053       23.6775       2.41838         5     
produce:ophit:OpHitFinder                        0.0447573     0.0532068     0.0612806     0.0538694    0.00690628        5     
produce:opflash:OpFlashFinderVerticalDrift      0.00983058     0.0143773     0.0257295     0.0109901    0.00593897        5     
produce:wclsdatavd:WireCellToolkit                70.079        81.5737       89.9398       83.1381       7.57822         4     
produce:gaushit:GausHitFinder                     1.35989       1.49377       1.82948       1.39285      0.194343         4     
produce:nhitsfilter:NumberOfHitsFilter          0.000315911   0.000409566   0.000532046   0.000395154    8.228e-05        4     
produce:reco3d:SpacePointSolver                   16.5881       20.6633       27.0685       19.4983       3.96335         4     
produce:hitpdune:DisambigFromSpacePoints         0.255623      0.325431      0.502358      0.271871      0.102838         4     
produce:pandora:StandardPandora                   67.5799       80.1868       109.78        71.6939       17.2244         4     
produce:pandoraTrack:LArPandoraTrackCreation      1.04359       1.36714       1.7678        1.32858      0.273438         4     
produce:pandoraGnocalo:GnocchiCalorimetry        0.0327321     0.0402885     0.0457436     0.0413392     0.0055759        4     
[art]:TriggerResults:TriggerResultInserter       1.572e-05    2.52525e-05   5.2038e-05    1.6626e-05    1.54742e-05       4     
end_path:out1:RootOutput                         3.566e-06    7.72675e-06   1.9306e-05    4.0175e-06    6.68918e-06       4     
end_path:out1:RootOutput(write)                   5.75003       5.89625       6.10436       5.86531      0.131729         4     
==================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 8589.92 MB
  Peak resident set size usage (VmHWM): 6707.71 MB
  Details saved in: 'mem.db'
====================================================================================================
%MSG-s ArtException:  PostEndJob 17-Sep-2025 10:35:14 CEST ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- ScheduleExecutionFailure BEGIN
    Path: ProcessingStopped.
    ---- BadAlloc BEGIN
      A bad_alloc exception was thrown while processing module WireCellToolkit/wclsdatavd run: 39275 subRun: 1 event: 33929
      The job has probably exhausted the virtual memory available to the process.
    ---- BadAlloc END
    Exception going through path produce
  ---- ScheduleExecutionFailure END
---- EventProcessorFailure END
%MSG
Art has completed and will exit with status 1.
Error in reco1
justIN time: 2025-09-18 19:28:47 UTC       justIN version: 01.05.00