Jobsub ID 47608.2@dunegpschedd01.fnal.gov
| Jobsub ID | 47608.2@dunegpschedd01.fnal.gov |
| Workflow ID | 2644 |
| Stage ID | 1 |
| User name | ykermaid@fnal.gov |
| HTCondor Group | group_dune.prod_mcsim |
| Requested | Processors | 1 |
| GPU | No |
| RSS bytes | 4193255424 (3999 MiB) |
| Wall seconds limit | 18000 (5 hours) |
| Submitted time | 2025-09-17 16:08:23 |
| Site | NL_NIKHEF |
| Entry | VIRGO_NL_NIKHEF_dissel |
| Last heartbeat | 2025-09-17 17:20:29 |
| From worker node | Hostname | wn-pep-010.farm.nikhef.nl |
| cpuinfo | Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 129600 (36 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | jobscript_error |
| Started | 2025-09-17 16:26:29 |
| Input files | vd-protodune:np02vd_raw_run039353_0984_df-s05-d2_dw_0_20250916T114433.hdf5
|
| Jobscript | Exit code | 1 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Max RSS bytes | 0 (0 MiB) |
| Outputting started | |
| Output files | |
| Finished | 2025-09-17 17:20:29 |
| Saved logs | justin-logs:47608.2-dunegpschedd01.fnal.gov.logs.tgz |
| List job events Cached HTCondor job logs |
Jobscript log (last 10,000 characters)
fsp> EOS at call=15 with 8
[18:59:54.964] D [ glue ] frame sink sees EOS
[18:59:54.964] D [ pgraph ] <Pgrapher:> graph execution complete
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::OmnibusSigProc : 9.57 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::OmnibusSigProc : 9.27 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::OmnibusSigProc : 9.27 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::OmnibusSigProc : 9.18 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::OmnibusSigProc : 8.74 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::OmnibusSigProc : 8.7 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::OmnibusSigProc : 8.65 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::OmnibusSigProc : 8.29 sec
[18:59:54.964] I [ timer ] Timer: WireCell::Aux::Resampler : 0.91 sec
[18:59:54.964] I [ timer ] Timer: WireCell::Aux::Resampler : 0.9 sec
[18:59:54.964] I [ timer ] Timer: WireCell::Aux::Resampler : 0.87 sec
[18:59:54.964] I [ timer ] Timer: WireCell::Aux::Resampler : 0.86 sec
[18:59:54.964] I [ timer ] Timer: WireCell::Gen::FrameFanin : 0.03 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::ChannelSelector : 0.02 sec
[18:59:54.964] I [ timer ] Timer: WireCell::Gen::Retagger : 0.01 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::ChannelSelector : 0 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::ChannelSelector : 0 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::ChannelSelector : 0 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::ChannelSelector : 0 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::ChannelSelector : 0 sec
[18:59:54.964] I [ timer ] Timer: WireCell::Gen::DumpFrames : 0 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::ChannelSelector : 0 sec
[18:59:54.964] I [ timer ] Timer: WireCell::SigProc::ChannelSelector : 0 sec
[18:59:54.964] I [ timer ] Timer: WireCell::Gen::FrameFanout : 0 sec
[18:59:54.964] I [ timer ] Timer: wcls::RawFrameSource : 0 sec
[18:59:54.964] I [ timer ] Timer: wcls::FrameSaver : 0 sec
[18:59:54.964] I [ timer ] Timer: Total node execution : 75.27000009641051 sec
wclsFrameSaver saving cooked to 10000 ticks
wclsFrameSaver: saving 42530 traces tagged "gauss"
FrameSaver: q=6.70232e+06 n=863956 tag=gauss
wclsFrameSaver: saving 51235 traces tagged "wiener"
FrameSaver: q=7.05348e+06 n=830212 tag=wiener
0 X, 0 U, 0 V bad channels
Finding XUV coincidences...
C:0 T:0 1835 XUs and 1958 XVs -> 75 XUVs
C:0 T:1 203 XUs and 312 XVs -> 2 XUVs
C:0 T:2 1557 XUs and 1782 XVs -> 116 XUVs
C:0 T:3 303 XUs and 282 XVs -> 6 XUVs
C:0 T:4 253 XUs and 281 XVs -> 5 XUVs
C:0 T:5 131 XUs and 189 XVs -> 2 XUVs
C:0 T:6 218 XUs and 252 XVs -> 8 XUVs
C:0 T:7 683 XUs and 652 XVs -> 34 XUVs
C:0 T:8 4051 XUs and 2959 XVs -> 136 XUVs
C:0 T:9 520 XUs and 888 XVs -> 38 XUVs
C:0 T:10 2265 XUs and 2301 XVs -> 109 XUVs
C:0 T:11 1072 XUs and 1006 XVs -> 63 XUVs
C:0 T:12 1787 XUs and 3473 XVs -> 112 XUVs
C:0 T:13 984 XUs and 1575 XVs -> 77 XUVs
C:0 T:14 959 XUs and 1351 XVs -> 48 XUVs
C:0 T:15 2368 XUs and 2499 XVs -> 114 XUVs
945 XUVs total
838 collection wire objects
945 potential space points
Neighbour search...
4641 tests to find 1994 neighbours
Iterating with no regularization...
Begin: 2.75055e+08
0 2.70336e+08
1 2.70268e+08
Now with regularization...
Begin: 2.6553e+08
0 2.65525e+08
RawFrameSource: got 12288 raw::RawDigit objects
input nticks=10000 keeping as is
[19:02:55.809] D [ main ] executing 1 apps, thread limit 0:
[19:02:55.809] D [ main ] executing 1 apps, thread limit 0:
[19:02:55.809] D [ main ] executing app: "Pgrapher"
[19:02:55.809] D [ pgraph ] <Pgrapher:> executing graph
[19:02:55.809] D [ pgraph ] executing with 26 nodes
[19:02:55.811] D [ glue ] <FrameFanout:nfsp> call=16: input: frame: ident=75910 time=32 tick=512 with 12288 traces. frame tags:[ "orig" ] 0 tagged trace sets:[ ] cmm:[ ] output 0: frame: ident=75910 time=32 tick=512 with 12288 traces. frame tags:[ "orig0" ] 0 tagged trace sets:[ ] cmm:[ ] output 1: frame: ident=75910 time=32 tick=512 with 12288 traces. frame tags:[ "orig1" ] 0 tagged trace sets:[ ] cmm:[ ] output 2: frame: ident=75910 time=32 tick=512 with 12288 traces. frame tags:[ "orig2" ] 0 tagged trace sets:[ ] cmm:[ ] output 3: frame: ident=75910 time=32 tick=512 with 12288 traces. frame tags:[ "orig3" ] 0 tagged trace sets:[ ] cmm:[ ] output 4: frame: ident=75910 time=32 tick=512 with 12288 traces. frame tags:[ "orig4" ] 0 tagged trace sets:[ ] cmm:[ ] output 5: frame: ident=75910 time=32 tick=512 with 12288 traces. frame tags:[ "orig5" ] 0 tagged trace sets:[ ] cmm:[ ] output 6: frame: ident=75910 time=32 tick=512 with 12288 traces. frame tags:[ "orig6" ] 0 tagged trace sets:[ ] cmm:[ ] output 7: frame: ident=75910 time=32 tick=512 with 12288 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[19:02:55.812] W [ glue ] <ChannelSelector:chsel7> Untagged summary not supported, summary will be dropped.
[19:02:55.812] D [ glue ] <ChannelSelector:chsel7> input frame: ident=75910 time=32 tick=512 with 12288 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ] output: frame: ident=75910 time=32 tick=512 with 1536 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[19:02:55.812] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=16 input frame: frame: ident=75910 time=32 tick=512 with 1536 traces. frame tags:[ "orig7" ] 0 tagged trace sets:[ ] cmm:[ ]
[19:02:55.813] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=16 init nticks=10048 tbinmin=0 tbinmax=10048
[19:02:55.858] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=16 load plane index: 0, ntraces=1536, input bad regions: 0
[19:02:58.730] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=16 load plane index: 1, ntraces=1536, input bad regions: 0
[19:03:01.525] D [sigproc ] <OmnibusSigProc:anode7sigproc7> call=16 load plane index: 2, ntraces=1536, input bad regions: 0
==================================================================================================================================
TimeTracker printout (sec) Min Avg Max Median RMS nEvts
==================================================================================================================================
Full event 5.9214e-05 226.8 331.188 244.271 85.4829 9
----------------------------------------------------------------------------------------------------------------------------------
source:HDF5RawInput3(read) 5.7645e-05 6.88518e-05 0.000134478 6.1986e-05 2.32786e-05 9
produce:tpcrawdecoder:PDVDTPCReader 85.8678 105.913 122.815 108.072 11.0957 9
produce:triggerrawdecoder:PDVDTriggerReader4 0.289443 0.360693 0.424097 0.367457 0.0438552 9
produce:pdvddaphne:DAPHNEReaderPDVD 0.000329868 0.000373005 0.000673498 0.000335249 0.000106344 9
produce:ophit:OpHitFinder 0.000110472 0.000195149 0.000744362 0.000116034 0.000195733 9
produce:opflash:OpFlashFinderVerticalDrift 4.2423e-05 7.50454e-05 0.000292107 4.6569e-05 7.68334e-05 9
produce:wclsdatavd:WireCellToolkit 74.2021 80.2036 88.2739 78.3196 4.90414 8
produce:gaushit:GausHitFinder 0.950877 1.32879 1.99192 1.30897 0.328072 8
produce:nhitsfilter:NumberOfHitsFilter 0.000321255 0.000410169 0.000566124 0.000375666 9.39612e-05 8
produce:reco3d:SpacePointSolver 8.25175 12.3863 21.2573 11.8639 3.94303 8
produce:hitpdune:DisambigFromSpacePoints 0.124486 0.190958 0.332027 0.17592 0.0627431 8
produce:pandora:StandardPandora 29.1215 49.4701 100.499 44.8018 20.5573 8
produce:pandoraTrack:LArPandoraTrackCreation 0.471154 1.10912 1.85755 1.0893 0.456436 8
produce:pandoraGnocalo:GnocchiCalorimetry 0.0187787 0.026657 0.0381779 0.0251767 0.00622834 8
[art]:TriggerResults:TriggerResultInserter 2.1097e-05 2.87699e-05 5.7986e-05 2.49235e-05 1.12432e-05 8
end_path:out1:RootOutput 3.957e-06 7.89838e-06 1.8893e-05 7.167e-06 4.37269e-06 8
end_path:out1:RootOutput(write) 4.55726 4.8053 5.03923 4.77163 0.171198 8
==================================================================================================================================
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 8589.81 MB
Peak resident set size usage (VmHWM): 6706.44 MB
Details saved in: 'mem.db'
====================================================================================================
%MSG-s ArtException: PostEndJob 17-Sep-2025 19:04:08 CEST ModuleEndJob
---- EventProcessorFailure BEGIN
EventProcessor: an exception occurred during current event processing
---- ScheduleExecutionFailure BEGIN
Path: ProcessingStopped.
---- BadAlloc BEGIN
A bad_alloc exception was thrown while processing module WireCellToolkit/wclsdatavd run: 39353 subRun: 1 event: 75910
The job has probably exhausted the virtual memory available to the process.
---- BadAlloc END
Exception going through path produce
---- ScheduleExecutionFailure END
---- EventProcessorFailure END
%MSG
Art has completed and will exit with status 1.
Error in reco1 