justIN           Dashboard       Workflows       Jobs       AWT       Sites       Storages       Docs       Login

Workflow 12199, Stage 1

Workflow12199
Campaign582
Priority50
Processors1
Wall seconds80000
Image/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes2097152000 (2000 MiB)
Max distance for inputs100.0
Enabled input RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites US_FNAL-FermiGrid
Scopeneardet-lar-tms-sand
Events for this stage

Output patterns

 DestinationPatternLifetimeFor next stageRSE expression
1Rucio neardet-lar-tms-sand:fnal-w12199s1p1MiniProdN5p1_NDComplex_FHC.genie.ndlarfid.sanddrift.gtrac_merged_0000000.0009000_l009999_20260121T200517*.tar604800False

Environment variables

NameValue
CONFIG_DIR/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/273880df74c806877f805e5de395fe2d17cef849
DUNE_QUALIFIERe26:prof
DUNE_VERSIONv10_12_01d01
MERGE_CONFIGpass1_US_FNAL-FermiGrid

File states

Total filesFindingUnallocatedAllocatedOutputtingProcessedNot foundFailed
10000001

Job states

TotalSubmittedStartedProcessingOutputtingFinishedNotusedAbortedStalledJobscript errorOutputting failedNone processed
1200006050010

RSEs used

NameInputsOutputs
MONTECARLO60

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

SiteAllocatedOutputting
US_FNAL-FermiGrid41

Jobscript

#!/bin/sh
: <<'EOF'

Hello World jobscript for justIN

Submit a workflow like this to run 10 jobs:

justin simple-workflow --monte-carlo 10 --jobscript hello-world.jobscript


Or like this to run jobs and put the output file into Rucio-managed storage:

justin simple-workflow \
     --monte-carlo 10 \
     --jobscript hello-world.jobscript \
     --description 'Hello World!!!' \
     --scope usertests \
     --output-pattern 'hello-world-*.txt:output-test-01'

EOF

# Try to get an unprocessed file from this stage
did_pfn_rse=`$JUSTIN_PATH/justin-get-file`
if [ "$did_pfn_rse" == "" ]; then
  echo "Nothing to process - exit jobscript"
  exit 0
fi
# extract job key from the did_pfn_rse string, which is of the form:
# monte-carlo-000001-000001 000001 MONTECARLO
jobkey=`echo $did_pfn_rse | cut -f2 -d' '`

# Get job configuration
while [ ! -d $CONFIG_DIR ]; do
  echo "Waiting for config directory $CONFIG_DIR to be created"
  sleep 5
done
config="${MERGE_CONFIG}_${jobkey}.json"
echo "Config file: $config"
cat $CONFIG_DIR/$config

# Setup DUNE environment
#DUNE_VERSION=`grep 'dune_version' $CONFIG_DIR/$config | cut -d'"' -f4`
#DUNE_QUALIFIER=`grep 'dune_qualifier' $CONFIG_DIR/$config | cut -d'"' -f4`
DUNE_VERSION=${DUNE_VERSION:-v10_12_01d00}
DUNE_QUALIFIER=${DUNE_QUALIFIER:-e26:prof}
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"

# Setup HDF5
pip install h5py

# Run the merge
export OUT_DIR=${PWD}
python3 $CONFIG_DIR/do_merge.py $CONFIG_DIR/$config $OUT_DIR

# Check for errors
exitcode=$?
if [ $exitcode -ne 0 ];
then
  echo "failed to merge $config (exit code $exitcode)"
  exit $exitcode
fi

echo -e "\n\nThe contents in the ${OUT_DIR} directory."
ls -lha *

echo "$jobkey" > justin-processed-pfns.txt

echo "merged $config"
echo "merged $config" >merge-`date +%s.%N.txt`

exit 0
justIN time: 2026-02-05 09:50:53 UTC       justIN version: 01.06.00