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Jobsub ID 14841.2@dunegpschedd02.fnal.gov

Jobsub ID14841.2@dunegpschedd02.fnal.gov
Workflow ID537
Stage ID1
User namecalcuttj@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes8387559424 (7999 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-08-06 14:34:34
SiteUK_Durham
EntryDUNE_UK_SGridDurham_ce3
Last heartbeat2025-08-06 16:42:00
From worker nodeHostnamen259.dur.scotgrid.ac.uk
cpuinfoAMD EPYC 7763 64-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes10485760000 (10000 MiB)
Wall seconds limit171000 (47 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2025-08-06 15:43:06
Input filesmonte-carlo-000537-000933
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-08-06 16:42:00
Saved logsjustin-logs:14841.2-dunegpschedd02.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

-Aug-2025 17:01:46 BST ModuleConstruction
Initializing Photon propagation time model.
%MSG
%MSG-i PropagationTimeModel:  PDFastSimPAR:PDFastSim@Construction  06-Aug-2025 17:01:46 BST ModuleConstruction
Using VUV timing parameterization
%MSG
%MSG-i PropagationTimeModel:  PDFastSimPAR:PDFastSim@Construction  06-Aug-2025 17:01:46 BST ModuleConstruction
Generating VUV parameters
%MSG
%MSG-i PropagationTimeModel:  PDFastSimPAR:PDFastSim@Construction  06-Aug-2025 17:07:29 BST ModuleConstruction
Photon propagation time model initalized.
%MSG
%MSG-i PDFastSimPAR:  PDFastSimPAR:PDFastSim@Construction  06-Aug-2025 17:07:29 BST ModuleConstruction
Using Lite Photons
%MSG
%MSG-i PDFastSimPAR:  PDFastSimPAR:PDFastSim@Construction  06-Aug-2025 17:07:29 BST ModuleConstruction
PDFastSimPAR Initialization finish.
Simulate using semi-analytic model for number of hits.
%MSG
06-Aug-2025 17:07:29 BST  Initiating request to open input file "pdhd_memtest_1_14841_2_1754495004_stage1_stage2_stage3.root"
%MSG-i Root_Information:  TriggerResultInserter:TriggerResults@Construction  TClass::Init() 06-Aug-2025 17:07:31 BST ModuleConstruction
no dictionary for class sim::IDE is available
ROOT severity: 2000
%MSG
06-Aug-2025 17:07:31 BST  Opened input file "pdhd_memtest_1_14841_2_1754495004_stage1_stage2_stage3.root"
Begin processing the 1st record. run: 1 subRun: 0 event: 1 at 06-Aug-2025 17:07:31 BST
%MSG-i NuRandomService:  PDFastSimPAR:PDFastSim@BeginModule  06-Aug-2025 17:07:31 BST run: 1 subRun: 0 event: 1
Random seed for this event, engine 'PDFastSim.photon': 797751327
%MSG
%MSG-i NuRandomService:  PDFastSimPAR:PDFastSim@BeginModule  06-Aug-2025 17:07:31 BST run: 1 subRun: 0 event: 1
Random seed for this event, engine 'PDFastSim.scinttime': 808747228
%MSG
06-Aug-2025 17:12:37 BST  Opened output file with pattern "pdhd_memtest_1_14841_2_1754495004_stage1_stage2_stage3_stage4.root"
%MSG-i FastCloning:  PostProcessEvent 06-Aug-2025 17:12:38 BST  run: 1 subRun: 0 event: 1
Fast cloning event data products from input file.
%MSG
Begin processing the 2nd record. run: 1 subRun: 0 event: 2 at 06-Aug-2025 17:13:48 BST
%MSG-i NuRandomService:  PDFastSimPAR:PDFastSim@BeginModule  06-Aug-2025 17:13:48 BST run: 1 subRun: 0 event: 2
Random seed for this event, engine 'PDFastSim.photon': 50999413
%MSG
%MSG-i NuRandomService:  PDFastSimPAR:PDFastSim@BeginModule  06-Aug-2025 17:13:48 BST run: 1 subRun: 0 event: 2
Random seed for this event, engine 'PDFastSim.scinttime': 386457413
%MSG
Begin processing the 3rd record. run: 1 subRun: 0 event: 3 at 06-Aug-2025 17:19:59 BST
%MSG-i NuRandomService:  PDFastSimPAR:PDFastSim@BeginModule  06-Aug-2025 17:19:59 BST run: 1 subRun: 0 event: 3
Random seed for this event, engine 'PDFastSim.photon': 43221785
%MSG
%MSG-i NuRandomService:  PDFastSimPAR:PDFastSim@BeginModule  06-Aug-2025 17:19:59 BST run: 1 subRun: 0 event: 3
Random seed for this event, engine 'PDFastSim.scinttime': 117767069
%MSG
Begin processing the 4th record. run: 1 subRun: 0 event: 4 at 06-Aug-2025 17:25:54 BST
%MSG-i NuRandomService:  PDFastSimPAR:PDFastSim@BeginModule  06-Aug-2025 17:25:54 BST run: 1 subRun: 0 event: 4
Random seed for this event, engine 'PDFastSim.photon': 222129713
%MSG
%MSG-i NuRandomService:  PDFastSimPAR:PDFastSim@BeginModule  06-Aug-2025 17:25:54 BST run: 1 subRun: 0 event: 4
Random seed for this event, engine 'PDFastSim.scinttime': 733631833
%MSG
06-Aug-2025 17:40:29 BST  Closed input file "pdhd_memtest_1_14841_2_1754495004_stage1_stage2_stage3.root"

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                      341.606       471.38        846.294       348.81        216.519         4     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                        0.00210674    0.00704453     0.0106498    0.00771078    0.00318359        4     
simulate:PDFastSim:PDFastSimPAR                 297.338       437.062       846.285       302.312       236.279         4     
[art]:TriggerResults:TriggerResultInserter    3.3453e-05    0.000116305   0.000282425   7.4672e-05    0.00010016        4     
end_path:out1:RootOutput                       5.491e-06    2.04965e-05   5.7419e-05     9.538e-06    2.1415e-05        4     
end_path:out1:RootOutput(write)                 42.7203       45.7474       50.2584       44.2636       3.2514          3     
================================================================================================================================
%MSG-i NuRandomService:  RootOutput:out1@EndJob 06-Aug-2025 17:40:30 BST  ModuleEndJob

Summary of seeds computed by the NuRandomService
Random policy: 'perEvent'
  algorithm version: EventTimestamp_v1
   Configured value          Last value   ModuleLabel.InstanceName
        (per event)           222129713   PDFastSim.photon
        (per event)           733631833   PDFastSim.scinttime

%MSG

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 10646.3 MB
  Peak resident set size usage (VmHWM): 9552.22 MB
====================================================================================================

TrigReport ---------- Event summary -------------
TrigReport Events total = 4 passed = 4 failed = 0

TrigReport ---------- Modules in End-path ----------
TrigReport        Run    Success      Error Name
TrigReport          4          4          0 out1

TimeReport ---------- Time summary [sec] -------
TimeReport CPU = 1954.431592 Real = 1979.215999

MemReport  ---------- Memory summary [base-10 MB] ------
MemReport  VmPeak = 10646.3 VmHWM = 9552.22

%MSG-s ArtException:  PostEndJob 06-Aug-2025 17:41:35 BST ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- FatalRootError BEGIN
    Fatal Root Error: TBufferFile::WriteByteCount
    bytecount too large (more than 1073741822)
    ROOT severity: 3000
  ---- FatalRootError END
---- EventProcessorFailure END
---- FatalRootError BEGIN
  Fatal Root Error: TTree::SetEntries
  Tree branches have different numbers of entries, eg EventAuxiliary has 3 entries while art::RNGsnapshots_rns__IonAndScintPDExt. has 10 entries.
  ROOT severity: 2000
---- FatalRootError END
%MSG
Art has completed and will exit with status 1.

Stderr:
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
  IonAndScint
  IonAndScintExternal
  PDFastSimExternal
  largeant
  rns
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_08_02d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25610 nodes/ 5537 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).

Error in processing stage4
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
  IonAndScint
  IonAndScintExternal
  PDFastSimExternal
  largeant
  rns
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_08_02d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25610 nodes/ 5537 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).

Error running. Exiting with 1
justIN time: 2025-08-17 05:51:49 UTC       justIN version: 01.04.01