Jobsub ID 236359.37@dunegpschedd02.fnal.gov
| Jobsub ID | 236359.37@dunegpschedd02.fnal.gov |
| Workflow ID | 9524 |
| Stage ID | 1 |
| User name | ykermaid@fnal.gov |
| HTCondor Group | group_dune.prod_mcsim |
| Requested | Processors | 2 |
| GPU | No |
| RSS bytes | 4193255424 (3999 MiB) |
| Wall seconds limit | 18000 (5 hours) |
| Submitted time | 2025-11-02 15:49:42 |
| Site | CERN |
| Entry | CMSHTPC_T2_CH_CERN_ce515 |
| Last heartbeat | 2025-11-02 16:38:37 |
| From worker node | Hostname | b9p08p1817.cern.ch |
| cpuinfo | AMD EPYC 7543 32-Core Processor |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 2 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 343800 (95 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | jobscript_error |
| Started | 2025-11-02 15:50:56 |
| Input files | vd-protodune:np02vd_raw_run040346_1953_df-s04-d3_dw_0_20251102T152250.hdf5
|
| Jobscript | Exit code | 1 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Max RSS bytes | 0 (0 MiB) |
| Outputting started | |
| Output files | |
| Finished | 2025-11-02 16:38:37 |
| Saved logs | justin-logs:236359.37-dunegpschedd02.fnal.gov.logs.tgz |
| List job events Cached HTCondor job logs |
Jobscript log (last 10,000 characters)
0614693 23
produce:pandora:StandardPandora 11.843 23.9253 51.7434 20.7579 10.3416 23
produce:pandoraTrack:LArPandoraTrackCreation 0.431651 0.880949 1.63889 0.788429 0.333509 23
produce:pandoraGnocalo:GnocchiCalorimetry 0.0200707 0.0349089 0.052801 0.0330629 0.00955942 23
[art]:TriggerResults:TriggerResultInserter 1.698e-05 2.52732e-05 5.4521e-05 2.3481e-05 7.76222e-06 23
end_path:out1:RootOutput 5.76e-06 1.13757e-05 3.665e-05 8.89e-06 7.76326e-06 23
end_path:out1:RootOutput(write) 4.20726 5.13002 6.43172 5.04592 0.590061 23
==================================================================================================================================
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 5161.44 MB
Peak resident set size usage (VmHWM): 3100.32 MB
Details saved in: 'mem.db'
====================================================================================================
Art has completed and will exit with status 0.
Output files:
\tReco: np02vd_raw_run040346_1953_df-s04-d3_dw_0_20251102T152250_reco_stage1_20251102T163533_keepup.root
\tHists: np02vd_raw_run040346_1953_df-s04-d3_dw_0_20251102T152250_reco_stage1_20251102T163533_keepup_hists.root
Forming reco metadata
Successfully opened file np02vd_raw_run040346_1953_df-s04-d3_dw_0_20251102T152250_reco_stage1_20251102T163533_keepup.root
Ran successfully
{
"name": "np02vd_raw_run040346_1953_df-s04-d3_dw_0_20251102T152250_reco_stage1_20251102T163533_keepup.root",
"namespace": "vd-protodune-det-reco",
"metadata": {
"core.file_format": "artroot",
"core.application.name": "reco",
"core.application.family": "dunesw",
"core.application.version": "v10_11_00d00",
"core.data_tier": "full-reconstructed",
"dune.config_file": "standard_reco_stage1_protodunevd_keepup_all.fcl",
"dune.campaign": "vd-protodune-reco-keepup-v0",
"core.start_time": 1762101333.0,
"core.end_time": 1762101333.0,
"core.events": [
180307,
180311,
180315,
180319,
180323,
180327,
180331,
180335,
180339,
180343,
180347,
180351,
180355,
180359,
180363,
180367,
180371,
180375,
180379,
180383,
180387,
180391,
180395
],
"core.event_count": 23,
"core.first_event_number": 180307,
"core.last_event_number": 180395,
"core.data_stream": "cosmics",
"core.file_content_status": "good",
"core.file_type": "detector",
"core.run_type": "vd-protodune",
"core.runs": [
40346
],
"core.runs_subruns": [
4034600001
],
"dune.daq_test": false,
"retention.status": "active",
"retention.class": "physics"
},
"parents": [
{
"did": "vd-protodune:np02vd_raw_run040346_1953_df-s04-d3_dw_0_20251102T152250.hdf5"
}
]
}Forming hist metadata
Traceback (most recent call last):
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connection.py", line 169, in _new_conn
conn = connection.create_connection(
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/util/connection.py", line 96, in create_connection
raise err
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/util/connection.py", line 86, in create_connection
sock.connect(sa)
TimeoutError: [Errno 110] Connection timed out
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 699, in urlopen
httplib_response = self._make_request(
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 382, in _make_request
self._validate_conn(conn)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 1010, in _validate_conn
conn.connect()
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connection.py", line 353, in connect
conn = self._new_conn()
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connection.py", line 181, in _new_conn
raise NewConnectionError(
urllib3.exceptions.NewConnectionError: <urllib3.connection.HTTPSConnection object at 0x14895e5dab80>: Failed to establish a new connection: [Errno 110] Connection timed out
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/adapters.py", line 439, in send
resp = conn.urlopen(
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/connectionpool.py", line 755, in urlopen
retries = retries.increment(
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/urllib3/util/retry.py", line 574, in increment
raise MaxRetryError(_pool, url, error or ResponseError(cause))
urllib3.exceptions.MaxRetryError: HTTPSConnectionPool(host='metacat.fnal.gov', port=9443): Max retries exceeded with url: /dune_meta_prod/app/data/file?with_metadata=yes&with_provenance=no&with_datasets=no&name=np02vd_raw_run040346_1953_df-s04-d3_dw_0_20251102T152250.hdf5&namespace=vd-protodune (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x14895e5dab80>: Failed to establish a new connection: [Errno 110] Connection timed out'))
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/runpy.py", line 197, in _run_module_as_main
return _run_code(code, main_globals, None,
File "/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/lib/python3.9/runpy.py", line 87, in _run_code
exec(code, run_globals)
File "/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/ff18e11900bfcc2b467fc81eba35d7e7de647a80/meta_maker.py", line 48, in <module>
results = inherit_metadata.inherit(args.parent)
File "/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/ff18e11900bfcc2b467fc81eba35d7e7de647a80/inherit_metadata.py", line 72, in inherit
'metadata':get_parent_md(parent_name),
File "/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/ff18e11900bfcc2b467fc81eba35d7e7de647a80/inherit_metadata.py", line 27, in get_parent_md
parent_file = mc.get_file(did=parent_name, with_metadata=True,
File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 1259, in get_file
return self.get_json(url)
File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 206, in get_json
return self.unpack_json_data(self.send_request("get", uri_suffix, headers=headers, stream=True))
File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 154, in send_request
self.LastResponse = response = self.retry_request(method, url, headers=headers, **args)
File "/cvmfs/dune.opensciencegrid.org/products/dune/metacat/v4_0_2/NULL/lib/python3.9/site-packages/metacat/webapi/webapi.py", line 131, in retry_request
response = requests.get(url, timeout=self.Timeout, **args)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/api.py", line 75, in get
return request('get', url, params=params, **kwargs)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/api.py", line 61, in request
return session.request(method=method, url=url, **kwargs)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/sessions.py", line 542, in request
resp = self.send(prep, **send_kwargs)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/sessions.py", line 655, in send
r = adapter.send(request, **kwargs)
File "/cvmfs/fermilab.opensciencegrid.org/products/common/prd/python_future_six_request/v1_3_1/Linux64bit-3-10-2-17-python3-9/requests/adapters.py", line 516, in send
raise ConnectionError(e, request=request)
requests.exceptions.ConnectionError: HTTPSConnectionPool(host='metacat.fnal.gov', port=9443): Max retries exceeded with url: /dune_meta_prod/app/data/file?with_metadata=yes&with_provenance=no&with_datasets=no&name=np02vd_raw_run040346_1953_df-s04-d3_dw_0_20251102T152250.hdf5&namespace=vd-protodune (Caused by NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x14895e5dab80>: Failed to establish a new connection: [Errno 110] Connection timed out'))
Error in hist metadata 