justIN           Dashboard       Workflows       Jobs       AWT       Sites       Storages       Docs       Login

Jobsub ID 297238.181@dunegpschedd01.fnal.gov

Jobsub ID297238.181@dunegpschedd01.fnal.gov
Workflow ID12132
Stage ID1
User namegalli@fnal.gov
RequestedProcessors1
GPUNo
RSS bytes4194304000 (4000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2026-01-21 01:10:11
SiteUK_Durham
EntryDUNE_UK_SGridDurham_ce4
Last heartbeat2026-01-21 02:12:50
From worker nodeHostnamen180.dur.scotgrid.ac.uk
cpuinfoIntel(R) Xeon(R) Gold 5220 CPU @ 2.20GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit171000 (47 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Started2026-01-21 01:11:49
Input filesfardet-hd:atmnu_max_weighted_randompolicy_dune10kt_1x2x6_6435715_455_20231207T043604Z_gen_g4_detsim_hitreco__20240510T052840Z_reco2.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2026-01-21 02:12:50
Saved logsjustin-logs:297238.181-dunegpschedd01.fnal.gov.logs.tgz
List job events     Cached HTCondor job logs

Jobscript log (last 10,000 characters)

Input PFN = root://xrootd1.esc.qmul.ac.uk:1094//dune/RSE/fardet-hd/d3/fc/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_6435715_455_20231207T043604Z_gen_g4_detsim_hitreco__20240510T052840Z_reco2.root
Setting up larsoft UPS area... /cvmfs/larsoft.opensciencegrid.org
Setting up DUNE UPS area... /cvmfs/dune.opensciencegrid.org/products/dune/
Using custom sources from /cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2

MRB_PROJECT=larsoft
MRB_PROJECT_VERSION=v09_91_04
MRB_QUALS=e26:prof
MRB_TOP=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft
MRB_SOURCE=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/srcs
MRB_BUILDDIR=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/build_slf7.x86_64
MRB_INSTALL=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof

PRODUCTS=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof:/cvmfs/dune.opensciencegrid.org/products/dune/testproducts:/cvmfs/dune.opensciencegrid.org/products/dune:/cvmfs/larsoft.opensciencegrid.org/products:/cvmfs/larsoft.opensciencegrid.org/packages:/cvmfs/fermilab.opensciencegrid.org/products/common/db/
CETPKG_INSTALL=/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof

local product directory is /cvmfs/fifeuser3.opensciencegrid.org/sw/dune/f2aa0933d6b0302a87f8b92969147394234f3bf2/larsoft/localProducts_larsoft_v09_91_04_e26_prof
----------- this block should be empty ------------------
---------------------------------------------------------
/cvmfs/larsoft.opensciencegrid.org/products/xrootd/v5_5_5a/Linux64bit+3.10-2.17-e26-p3915-prof/lib/libXrdPosixPreload.so
../justin-jobscript: line 77:  1261 Segmentation fault      (core dumped) lar -c $FCL_FILE $events_option $OUTPUT_CMD "$pfn" > ${fname}_reco_${now}.log 2>&1
lar exit code 139
=== Start last 100 lines of lar log file ===
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 1440
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 1441
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 1442
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 1443
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 1444
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 1445
No muon's daughter PDG code: 2112
No muon's daughter Track ID: 1446
No muon's daughter PDG code: 22
No muon's daughter Track ID: 1447
No muon's daughter PDG code: 22
No muon's daughter Track ID: 1448
No muon's daughter PDG code: 22
No muon's daughter Track ID: 1449
No muon's daughter PDG code: 1000180360
No muon's daughter Track ID: 1450
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 1463
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 1464
No muon's daughter PDG code: 22
No muon's daughter Track ID: 1465
No muon's daughter PDG code: 2112
No muon's daughter Track ID: 1466
No muon's daughter PDG code: 22
No muon's daughter Track ID: 1467
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 1468
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 1473
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 1474
No muon's daughter PDG code: 1000180400
No muon's daughter Track ID: 1475
%MSG-e ana:  AtmSelection:atmselection@BeginModule 21-Jan-2026 02:09:02 GMT  run: 6435715 subRun: 1 event: 45576
... Filling Reco Tree ... 
%MSG
N PFParticles: 7
%MSG-e ana:  AtmSelection:atmselection@BeginModule 21-Jan-2026 02:09:02 GMT  run: 6435715 subRun: 1 event: 45576
------------------------ RECO ---------------------------------------
---> Module_Label: pandora;		 Instance_Name: ;	 Product_Type: recob::PFParticle; Output_Name: Reco
---> Module_Label: pandoraTrack;	 Instance_Name: ;	 Product_Type: recob::Track;	 Output_Name: Reco
---> Module_Label: pandora;		 Instance_Name: ;	 Product_Type: recob::Cluster;	 Output_Name: Reco
Number of PFParticles: 7
---------------------------------------------------------------------
%MSG
number: 0
EndHit of sim_muon: 0
EndHit of sim_muon: 4
EndHit of sim_muon: 0
EndHit of sim_muon: 0
WARNING: look into dedx vector size
EndHit of sim_muon: 0
WARNING: look into dedx vector size
EndHit of sim_muon: 0
Vertex vector size = 7

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                      1.84449       28.5616       182.333       17.5731       30.9128        76     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                         0.0369426     0.598562       18.1328      0.154623       2.08244        76     
prod:emtrkmichelid:EmTrackMichelId              1.6604        19.0797       159.748       10.6996       22.4926        76     
[art]:TriggerResults:TriggerResultInserter    1.1966e-05    1.50822e-05   4.3754e-05    1.34495e-05   4.33812e-06      76     
end_path:atmselection:AtmSelection             0.118091       8.88314       103.208       1.30929       15.9428        76     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 12115.8 MB
  Peak resident set size usage (VmHWM): 1077.71 MB
====================================================================================================
%MSG-s ArtException:  PostEndJob 21-Jan-2026 02:12:33 GMT ModuleEndJob
---- FileReadError BEGIN
  ---- FatalRootError BEGIN
    Fatal Root Error: TNetXNGFile::ReadBuffer
    [FATAL] Hand shake failed
    ROOT severity: 3000
  ---- FatalRootError END
  
---- FileReadError END
---- FatalRootError BEGIN
  Fatal Root Error: TNetXNGFile::Close
  [FATAL] Hand shake failed
  ROOT severity: 3000
---- FatalRootError END
---- FatalRootError BEGIN
  Fatal Root Error: TNetXNGFile::Close
  [FATAL] Hand shake failed
  ROOT severity: 3000
---- FatalRootError END
%MSG
=== End last 100 lines of lar log file ===
.:
total 2532
-rw-r--r--. 1 dune004 dune 2458816 Jan 21 02:12 atmnu_max_weighted_randompolicy_dune10kt_1x2x6_6435715_455_20231207T043604Z_gen_g4_detsim_hitreco__20240510T052840Z_reco2_ana_2026-01-21T_011156Z.root
-rw-r--r--. 1 dune004 dune  114488 Jan 21 02:12 atmnu_max_weighted_randompolicy_dune10kt_1x2x6_6435715_455_20231207T043604Z_gen_g4_detsim_hitreco__20240510T052840Z_reco2_reco_2026-01-21T_011156Z.log
-rw-r--r--. 1 dune004 dune    6830 Jan 21 02:12 jobscript.log
-rw-r--r--. 1 dune004 dune     137 Jan 21 01:11 all-input-dids.txt
-rw-r--r--. 1 dune004 dune       0 Jan 21 01:12 debugprod.log
justIN time: 2026-02-04 05:49:53 UTC       justIN version: 01.06.00