Workflow 11388, Stage 1
| Workflow | 11388 |
| Priority | 50 |
| Processors | 1 |
| Wall seconds | 80000 |
| Image | /cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest |
| RSS bytes | 4194304000 (4000 MiB) |
| Max distance for inputs | 100.0 |
| Enabled input RSEs |
CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC |
| Enabled output RSEs |
CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC |
| Enabled sites |
BR_CBPF, CA_SFU, CA_Victoria, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Glasgow, UK_Imperial, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_BNL, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_NotreDame, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin |
| Scope | usertests |
| Events for this stage |
Output patterns
| | Destination | Pattern | Lifetime | For next stage | RSE expression |
|---|
| 1 | https://fndcadoor.fnal.gov:2880/dune/persistent/physicsgroups/dunedaq/jierans/vd_radiologicals_with_pds/ntuple/fnal/11388/1 | triggerAna_*.ntuple.root | | | |
| 2 | https://fndcadoor.fnal.gov:2880/dune/persistent/physicsgroups/dunedaq/jierans/vd_radiologicals_with_pds/artroot/fnal/11388/1 | tpg*.root | | | |
Environment variables
| Name | Value |
|---|
| DUNE_VERSION | v10_14_01d00 |
| INPUT_TAR_DIR_LOCAL | /cvmfs/fifeuser1.opensciencegrid.org/sw/dune/fdeb0d994c9cd59b7d1e308c08f5a3a9fad4bc0e |
| NUM_EVENTS | 1 |
File states
| Total files | Finding | Unallocated | Allocated | Outputting | Processed | Not found | Failed |
|---|
|
| 5 | 0 | 0 | 0 | 0 | 0 | 0 | 5 |
Job states
| Total | Submitted | Started | Processing | Outputting | Finished | Notused | Aborted | Stalled | Jobscript error | Outputting failed | None processed |
|---|
| 59 | 0 | 0 | 0 | 0 | 29 | 0 | 21 | 3 | 1 | 5 | 0 |
RSEs used
| Name | Inputs | Outputs |
|---|
| MONTECARLO | 30 | 0 |
Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)
File reset events, by site
| Site | Allocated | Outputting |
|---|
| NL_NIKHEF | 7 | 0 |
| CA_SFU | 5 | 0 |
| UK_QMUL | 4 | 2 |
| UK_Oxford | 2 | 0 |
| BR_CBPF | 1 | 0 |
| US_UChicago | 0 | 3 |
Jobscript
#!/bin/bash
# fcl file and DUNE software version/qualifier to be used
# FCL_FILE=${FCL_FILE:-$INPUT_TAR_DIR_LOCAL/my_code/fcls/my_reco.fcl}
DUNE_VERSION=${DUNE_VERSION:-v10_14_01d00}
DUNE_QUALIFIER=${DUNE_QUALIFIER:-e26:prof}
echo "sw version: ${DUNE_VERSION} ${DUNE_QUALIFIER}"
echo "input tarball location:" ${INPUT_TAR_DIR_LOCAL}
# number of events to process from the input file
if [ "$NUM_EVENTS" != "" ]; then
events_option="-n $NUM_EVENTS"
fi
# First get an unprocessed file from this stage
did_pfn_rse=$($JUSTIN_PATH/justin-get-file)
did=`echo $did_pfn_rse | cut -f1 -d' '`
pfn=`echo $did_pfn_rse | cut -f2 -d' '`
rse=`echo $did_pfn_rse | cut -f3 -d' '`
echo "Input DID = $did"
echo "Input PFN = $pfn"
echo "Input RSE = $rse"
if [ "$did_pfn_rse" = "" ]; then
echo "Nothing to process - exit jobscript"
exit 0
fi
if [[ $did != monte-carlo-* ]]; then
echo "Error: did must start with 'monte-carlo-'. Got: $did" >&2
exit 1
fi
# Convert DID to a run:subrun:event triplet for larsoft
tmp=${did#monte-carlo-} # strip leading "monte-carlo-"
workflow_id=${tmp%-*} # everything before last '-'
mcnum=${tmp##*-} # everything after last '-'
runspec="${workflow_id}:${mcnum}:1"
echo "Run:SubRun:Event = $runspec"
# Setup DUNE environment
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
export PRODUCTS="$(echo ${INPUT_TAR_DIR_LOCAL}/dunesw-${DUNE_VERSION}/localProducts_larsoft*_prof/):$PRODUCTS"
# Then we can set up our local products
setup duneana "$DUNE_VERSION" -q "$DUNE_QUALIFIER"
setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"
# Construct outFile from input $pfn
now=$(date -u +"%Y-%m-%dT_%H%M%SZ")
Ffname=$(echo $pfn | awk -F/ '{print $NF}')
fname=$(echo $Ffname | awk -F. '{print $1}')
campaign="justIN.w${JUSTIN_WORKFLOW_ID}s${JUSTIN_STAGE_ID}"
outFile=tpg_${JUSTIN_WORKFLOW_ID}_${mcnum}.root
anaFile=triggerAna_${JUSTIN_WORKFLOW_ID}_${mcnum}.ntuple.root
# Here is where the LArSoft command is call it
(
# Do the scary preload stuff in a subshell!
export LD_PRELOAD=${XROOTD_LIB}/libXrdPosixPreload.so
echo "$LD_PRELOAD"
# Gen
lar -c prodbackground_radiological_decay0_dunevd10kt_1x8x6_patched_wall_gammas.fcl $events_option -e $runspec -o tmp_gen.root
# G4
lar -c standard_g4_dunevd10kt_1x8x6_3view_30deg.fcl $events_option -s tmp_gen.root -o tmp_g4.root
# Detsim
lar -c detsim_dunevd10kt_1x8x6_3view_30deg_notpcsigproc.fcl $events_option -s tmp_g4.root -o tmp_detsim.root
# TPG - tpc
lar -c triggersim_tpg_vd_1x8x6.fcl $events_option -s tmp_detsim.root -o tmp_tpg_tpc.root
# TPG - PDS + Ana
lar -c triggersim_triggerana_dunefdvd_1x8x6_pds.fcl $events_option -s tmp_tpg_tpc.root -o $outFile -T $anaFile
)
# Subshell exits with exit code of last command
larExit=$?
echo "lar exit code $larExit"
if [ $larExit -eq 0 ]; then
# Success !
echo "$pfn" >justin-processed-pfns.txt
jobscriptExit=0
else
# Oh :(
jobscriptExit=1
fi
# Create compressed tar file with all log files
tar zcf $(echo "$JUSTIN_JOBSUB_ID.logs.tgz" | sed 's/@/_/g') *.log
exit $jobscriptExit
