Workflow 12039, Stage 1

Workflow	12039
Campaign	438
Priority	50
Processors	1
Wall seconds	80000
Image	/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes	4194304000 (4000 MiB)
Max distance for inputs	0.0
Enabled input RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites	BR_CBPF, CA_SFU, CA_Victoria, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Glasgow, UK_Imperial, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_BNL, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_NotreDame, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scope	usertests
Events for this stage

Output patterns

	Destination	Pattern	Lifetime	For next stage	RSE expression
1	https://fndcadoor.fnal.gov:2880/dune/scratch/users/jierans/vd_1x8x14_radiologicals_with_pds_20260118/ntuple/fnal/12039/1	triggerAna_*.ntuple.root

Environment variables

Name	Value
DUNE_VERSION	v10_14_01d00
INPUT_TAR_DIR_LOCAL	/cvmfs/fifeuser4.opensciencegrid.org/sw/dune/02ee0029a45e954a9b96a00f1f61b0693e0f0c49
NUM_EVENTS	100

File states

Total files	Finding	Unallocated	Allocated	Outputting	Processed	Not found	Failed
1000	0	993	0	0	7	0	0

Job states

Total	Submitted	Started	Processing	Outputting	Finished	Notused	Aborted	Stalled	Jobscript error	Outputting failed	None processed
2597	0	0	0	0	1109	1488	0	0	0	0	0

RSEs used

Name	Inputs	Outputs
DUNE_CERN_EOS	2	0
QMUL	2	0
PRAGUE	1	0
RAL_ECHO	1	0
RAL-PP	1	0
None	0	7

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

Jobscript

#!/bin/bash
# fcl file and DUNE software version/qualifier to be used
# FCL_FILE=${FCL_FILE:-$INPUT_TAR_DIR_LOCAL/my_code/fcls/my_reco.fcl}
DUNE_VERSION=${DUNE_VERSION:-v10_14_01d00}
DUNE_QUALIFIER=${DUNE_QUALIFIER:-e26:prof}
echo "sw version: ${DUNE_VERSION} ${DUNE_QUALIFIER}"
echo "input tarball location:" ${INPUT_TAR_DIR_LOCAL}

# number of events to process from the input file
if [ "$NUM_EVENTS" != "" ]; then
  events_option="-n $NUM_EVENTS"
fi

# First get an unprocessed file from this stage
did_pfn_rse=$($JUSTIN_PATH/justin-get-file)
did=`echo $did_pfn_rse | cut -f1 -d' '`
pfn=`echo $did_pfn_rse | cut -f2 -d' '`
rse=`echo $did_pfn_rse | cut -f3 -d' '`
echo "Input DID = $did"
echo "Input PFN = $pfn"
echo "Input RSE = $rse"

if [ "$did_pfn_rse" = "" ]; then
  echo "Nothing to process - exit jobscript"
  exit 0
fi

# Setup DUNE environment
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
export PRODUCTS="$(echo ${INPUT_TAR_DIR_LOCAL}/dunesw-${DUNE_VERSION}/localProducts_larsoft*_prof/):$PRODUCTS"
# Then we can set up our local products
setup duneana "$DUNE_VERSION" -q "$DUNE_QUALIFIER"
setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"

# Construct outFile from input $pfn
now=$(date -u +"%Y-%m-%dT_%H%M%SZ")
Ffname=$(echo $pfn | awk -F/ '{print $NF}')
fname=$(echo $Ffname | awk -F. '{print $1}')
campaign="justIN.w${JUSTIN_WORKFLOW_ID}s${JUSTIN_STAGE_ID}"

outFile=tpg_${JUSTIN_WORKFLOW_ID}_${now}.root
anaFile=triggerAna_${JUSTIN_WORKFLOW_ID}_${now}.ntuple.root

# Here is where the LArSoft command is call it
(
  # Do the scary preload stuff in a subshell!
  export LD_PRELOAD=${XROOTD_LIB}/libXrdPosixPreload.so
  echo "$LD_PRELOAD"
  # TPG - PDS + Ana
  lar -c triggersim_triggerana_dunefdvd_1x8x14_pds.fcl $events_option -s "$pfn" -o $outFile -T $anaFile 
)

# Subshell exits with exit code of last command
larExit=$?
echo "lar exit code $larExit"

if [ $larExit -eq 0 ]; then
  # Success !
  echo "$pfn" >justin-processed-pfns.txt
  jobscriptExit=0
else
  # Oh :(
  jobscriptExit=1
fi

# Create compressed tar file with all log files
tar zcf $(echo "$JUSTIN_JOBSUB_ID.logs.tgz" | sed 's/@/_/g') *.log
exit $jobscriptExit