Workflow 1736, Stage 1

Priority	50
Processors	1
Wall seconds	80000
Image	/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes	2097152000 (2000 MiB)
Max distance for inputs	100.0
Enabled input RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites	BR_CBPF, CA_SFU, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Glasgow, UK_Imperial, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scope	usertests
Events for this stage

Output patterns

	Destination	Pattern	Lifetime	For next stage	RSE expression
1	https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/wirecell_sim_tracks/fnal/01736/1	apanpz

Environment variables

Name	Value
do_tracks	1
track_inputs	/pnfs/dune/resilient/users/calcuttj/test_tracks
WIRECELL_TAR	/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/a86f07c7506a23a276258783e58616bd3d366426/

File states

Total files	Finding	Unallocated	Allocated	Outputting	Processed	Not found	Failed
500	0	0	0	0	500	0	0

Job states

Total	Submitted	Started	Processing	Outputting	Finished	Notused	Aborted	Stalled	Jobscript error	Outputting failed	None processed
563	0	0	0	0	561	0	0	2	0	0	0

RSEs used

Name	Inputs	Outputs
MONTECARLO	502	0
None	0	500

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

Site	Allocated	Outputting
UK_RAL-Tier1	2	0

Jobscript

#!/bin/bash
#

#These must be defined
if [ -z ${WIRECELL_TAR} ]; then
  echo "Fatal must provide WIRECELL_TAR env var"
  exit 1
fi


source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
if [ -z ${JUSTIN_PROCESSORS} ]; then
  JUSTIN_PROCESSORS=1
fi

echo "Justin processors: ${JUSTIN_PROCESSORS}"

export TF_NUM_THREADS=${JUSTIN_PROCESSORS}   
export OPENBLAS_NUM_THREADS=${JUSTIN_PROCESSORS} 
export JULIA_NUM_THREADS=${JUSTIN_PROCESSORS} 
export MKL_NUM_THREADS=${JUSTIN_PROCESSORS} 
export NUMEXPR_NUM_THREADS=${JUSTIN_PROCESSORS} 
export OMP_NUM_THREADS=${JUSTIN_PROCESSORS}
echo "Will use justin-get-file"
DID_PFN_RSE=`$JUSTIN_PATH/justin-get-file`
if [ "${DID_PFN_RSE}" == "" ] ; then
  echo "Could not get file"
  exit 0
fi
export pfn=`echo ${DID_PFN_RSE} | cut -f2 -d' '`
echo "PFN: $pfn"

export pfn_number=$((10#$pfn - 1))
echo "PFN num: $pfn_number"

 WIRECELL_VERSION=${WIRECELL_VERSION:-v0_30_6}
 setup wirecell \
    "${WIRECELL_VERSION}" \
    -q "${WIRECELL_QUALIFIER:-e26:prof}"
 
 setup_exit=$?
 if [ $? -ne 0 ]; then
   echo "Failed to setup wirecell $WIRECELL_VERSION $WIRECELL_QUALIFIER"
   exit $setup_exit
 fi

WIRECELL_PATH=${WIRECELL_TAR}:${WIRECELL_PATH}
jobid=`echo "${JUSTIN_JOBSUB_ID:-1}" | cut -f1 -d'@' | sed -e "s/\./_/"`
 echo "jobsub_id: ${jobid}"
#  run=`echo $jobid | cut -f1 -d'_'`  ##TODO -- check order here
#  subrun=`echo $jobid | cut -f2 -d'_'`

do_tracks=${do_tracks:-0}
now=$(date +%N);
seed=$((10#${now}))
if [ $do_tracks -eq 0 ]; then
    nevents=${nevents:-10}
    wire-cell -l stdout -L trace -P $WIRECELL_DIR/source/*/cfg/ -C elecGain=7.8 \
            -C GoodAPA=false -A outname="just_noise_10events_${jobid}.npz" \
            --tla-code nevents=${nevents} --tla-code just_noise=true \
            --tla-code seeds="[${seed}]" ${WIRECELL_TAR}/wct-sim-framesink.jsonnet
else

    # if [ -z ${WIRECELLPY} ]; then
    #     echo "Fatal: need to provide WIRECELLPY when running with tracks"
    #     exit 1
    # fi

    # export PYTHONPATH=${WIRECELLPY}:${PYTHONPATH}
    # python ${WIRECELLPY}/wirecell/gen/__main__.py --seed ${seed} -o test_tracks.npz -c "-3.5*m,0,0" -d "3.5*m,6*m,2.32*m" -s 1 -t 100 --track-info omit

    start_num=${start_num:-0}

    good_apa=${good_apa:-0}
    if [ $good_apa -eq 0 ]; then
        good_apa_str="false"
        output_name="bad_apa_${jobid}.npz"
    else
        good_apa_str="true"
        output_name="good_apa_${jobid}.npz"
    fi
    
    if [ -z ${track_inputs} ]; then
        echo "Fatal must provide track_inputs env var"
        exit 1
    fi

    echo "Good apa: $good_apa_str $output_name"
    pfn_number=$(($pfn_number + $start_num))

    echo "Doing tracks"
    # ls ${track_inputs}/test_tracks_${pfn_number}.npz
    path=$(echo ${track_inputs} | sed -e "s/\/pnfs/root:\/\/fndca1.fnal.gov:1094\/\/pnfs\/fnal.gov\/usr/")
    echo $path
    xrdcp ${path}/test_tracks_${pfn_number}.npz  .
    wire-cell -l stdout -L trace -P $WIRECELL_DIR/source/*/cfg/ -C elecGain=7.8 \
              -C GoodAPA=${good_apa_str} -A outname="${output_name}" \
              -A inname="test_tracks_${pfn_number}.npz" wct-sim-framesink.jsonnet
fi

 exitcode=$?
 if [ $exitcode -ne 0 ]; then
   echo "Error running. Exiting with ${exitcode}"
   exit $exitcode
 fi


echo "$pfn" > justin-processed-pfns.txt