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Workflow 1761, Stage 1

Priority50
Processors1
Wall seconds80000
Image/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes4194304000 (4000 MiB)
Max distance for inputs3000.0
Enabled input RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites BR_CBPF, CA_SFU, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Glasgow, UK_Imperial, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scopeusertests
Events for this stage

Output patterns

 DestinationPatternLifetimeFor next stageRSE expression
1https://fndcadoor.fnal.gov:2880/dune/scratch/users/ichong/fnal/01761/1*_caf.root

Environment variables

NameValue
CODE_TAR_DIR_LOCAL/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/2bb739fa8328d5424945e0da9e26ee51730d3245
DUNE_QUALIFIERe26:prof
DUNE_VERSIONv10_10_00d00
FCL_FILE/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/dd6a1a1ed0e1b68fc7ec0a7c38cc58ce82f397ac/atm-truth-vtx-reco.fcl
FCL_SECONDARYcafmaker_atmos_dune10kt_1x2x6_runreco-nuenergy-nuangular_geov5.fcl
NUM_EVENTS200
XML_MASTER/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/dd6a1a1ed0e1b68fc7ec0a7c38cc58ce82f397ac/PandoraSettings_Master_Atmos_Production.xml
XML_NEUTRINO/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/dd6a1a1ed0e1b68fc7ec0a7c38cc58ce82f397ac/PandoraSettings_Neutrino_Atmos_Production.xml

File states

Total filesFindingUnallocatedAllocatedOutputtingProcessedNot foundFailed
10000000970030

Job states

TotalSubmittedStartedProcessingOutputtingFinishedNotusedAbortedStalledJobscript errorOutputting failedNone processed
191500001476021810611320
Files processed00100100200200300300400400500500600600700700Aug-21 16:00Aug-21 17:00Aug-21 18:00Aug-21 19:00Aug-21 20:00Files processedBin start timesNumber per binNL_SURFsaraUK_QMULUK_ManchesterUK_RAL-Tier1NL_NIKHEFUK_RAL-PPDFR_CCIN2P3CZ_FZUCERNUK_BristolUK_GlasgowBR_CBPFUS_UChicagoES_PICUS_FNAL-T1US_FNAL-FermiG…US_FNAL-FermiGridIT_CNAF
Replicas per RSE1000479.43227450338236199.340040578731021000323.65874038187235322.95927419129913127282.45005418055723194.3503080639486108297.88212219578315168.08532678582324106317.95896663138194148.9176858650752481339.08830253619817136.9725656804718680359.0664024042275130.8017708887489330373.2401590406821128.9172014542592711378.5690936794252128.70972263735962Replicas per RSEFNAL_DCACHE (39%)PRAGUE (39%)RAL_ECHO (4%)QMUL (4%)NIKHEF (4%)RAL-PP (3%)SURFSARA (3%)DUNE_FR_CCIN2P3_DISK (1%)DUNE_ES_PIC (0%)

RSEs used

NameInputsOutputs
PRAGUE7290
RAL_ECHO1590
QMUL1170
RAL-PP1160
SURFSARA1120
NIKHEF1100
DUNE_FR_CCIN2P3_DISK360
DUNE_ES_PIC280
None0970

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

SiteAllocatedOutputting
UK_RAL-Tier1930
UK_Manchester540
CERN340
NL_SURFsara340
US_FNAL-FermiGrid160
CZ_FZU150
FR_CCIN2P3150
UK_RAL-PPD140
ES_PIC80
NL_NIKHEF80
UK_QMUL70
IT_CNAF30
US_UChicago30
BR_CBPF10
UK_Lancaster10
US_FNAL-T110

Jobscript

#!/bin/bash
:<<'EOF'
This jobscript generates CaloHitList-based graph data 
from input reco2 ROOT files using your custom LArSoft setup.

Required environment variables:
  - FCL_FILE
  - CODE_TAR_DIR_LOCAL
  - DUNE_VERSION
  - DUNE_QUALIFIER
  - XML_MASTER
  - XML_NEUTRINO
  - NUM_EVENTS (optional)
  - FCL_SECONDARY (optional)
EOF

# === Setup FCL and version info ===

DUNE_VERSION=${DUNE_VERSION}
DUNE_QUALIFIER=${DUNE_QUALIFIER}

# === Number of events option ===
if [ -n "$NUM_EVENTS" ]; then
  events_option="-n $NUM_EVENTS"
fi

# === Get a file from justIN ===
did_pfn_rse=$($JUSTIN_PATH/justin-get-file)
if [ -z "$did_pfn_rse" ]; then
  echo "No file assigned. Exiting jobscript."
  exit 0
fi

# === Track input DID for MetaCat ===
echo "$did_pfn_rse" | cut -f1 -d' ' >> all-input-dids.txt

# === Parse PFN from DID ===
pfn=$(echo "$did_pfn_rse" | cut -d' ' -f2)
echo "Input PFN = $pfn"

# === Setup DUNE software ===
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"

# === Mirror CODE_TAR_DIR_LOCAL ===
INPUT_TAR_DIR_LOCAL="$CODE_TAR_DIR_LOCAL"
echo "INPUT_TAR_DIR_LOCAL = $INPUT_TAR_DIR_LOCAL"

# === Setup custom code ===
if [ -n "$CODE_TAR_DIR_LOCAL" ]; then
  echo "Using local products from $CODE_TAR_DIR_LOCAL"
  source "$CODE_TAR_DIR_LOCAL/larsoft_truth_vtx_1010/localProducts_larsoft_v10_10_00_e26_prof/setup-grid"
  mrbslp
fi

# === Generate common timestamp and random suffix for output renaming ===
timestamp=$(date -u +"%Y-%m-%dT_%H%M%SZ")
rand_suffix=$((1 + RANDOM % 10))

# === Output file naming ===
fname=$(basename "$pfn" .root)
outFile="${fname}_truthvtx_${timestamp}.root"
logFile="truthvtx_${timestamp}_vtx.log"

# === Set FW search path ===
XML_DIR_MASTER=$(dirname "$XML_MASTER")
XML_DIR_NEUTRINO=$(dirname "$XML_NEUTRINO")
export FW_SEARCH_PATH="$XML_DIR_MASTER:$XML_DIR_NEUTRINO:$FW_SEARCH_PATH"

# === Run lar (primary) ===
export LD_PRELOAD=${XROOTD_LIB}/libXrdPosixPreload.so
echo "Running LArSoft with FCL: $FCL_FILE"
lar -c "$FCL_FILE" $events_option -o "$outFile" -s "$pfn" > "$logFile" 2>&1
larExit=$?


###################run caf ###################

if [ -n "$FCL_SECONDARY" ]; then
  caf_timestamp=$(date -u +"%Y-%m-%dT_%H%M%SZ")
  secondary_out="caf_${fname}_truthvtx_${caf_timestamp}.root"
  secondary_log="caf_${fname}_truthvtx_${caf_timestamp}.log"
  echo "Running CAF step with FCL_SECONDARY: $FCL_SECONDARY using reco output: $outFile"
  lar -c "$FCL_SECONDARY" $events_option -o "$secondary_out" -s "$outFile" > "$secondary_log" 2>&1

  # === Rename CAF output root file to include timestamp if needed ===
  new_caf_out="caf_truthvtx_${caf_timestamp}_caf.root"
  mv caf.root "$new_caf_out"
  echo "Renamed caf.root -> $new_caf_out"

fi





# === Show lar log tail ===
echo '=== Start last 100 lines of lar log file ==='
tail -100 "$logFile"
echo '=== End last 100 lines of lar log file ==='



# === Show lar log tail ===
echo '=== Start last 100 lines of lar log file ==='
tail -100 "$secondary_log"
echo '=== End last  100 lines of lar log file ==='



# === Mark processed ===
if [ $larExit -eq 0 ]; then
  echo "$pfn" > justin-processed-pfns.txt
  jobscriptExit=0
else
  jobscriptExit=1
fi

# === Package logs ===
tar zcf "${JUSTIN_JOBSUB_ID//[@]/_}.logs.tgz" *.log

# === Display output summary ===
echo "=== Generated output files ==="
ls -1 *.* 2>/dev/null | grep -v 'all-input-dids.txt' || echo "No output files found."

exit $jobscriptExit
# === Package logs ===
tar zcf "${JUSTIN_JOBSUB_ID//[@]/_}.logs.tgz" *.log

# === Display output summary ===
echo "=== Generated output files ==="
ls -1 *.* 2>/dev/null | grep -v 'all-input-dids.txt' || echo "No output files found."

exit $jobscriptExit
justIN time: 2025-09-19 04:06:21 UTC       justIN version: 01.05.00