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Workflow 1890, Stage 1

Priority	50
Processors	1
Wall seconds	80000
Image	/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes	4194304000 (4000 MiB)
Max distance for inputs	3000.0
Enabled input RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites	BR_CBPF, CA_SFU, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Glasgow, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scope	usertests
Events for this stage

Output patterns

	Destination	Pattern	Lifetime	For next stage	RSE expression
1	https://fndcadoor.fnal.gov:2880/dune/scratch/users/ichong/fnal/01890/1	*_caf.root

Environment variables

Name	Value
CODE_TAR_DIR_LOCAL	/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/2bb739fa8328d5424945e0da9e26ee51730d3245
DUNE_QUALIFIER	e26:prof
DUNE_VERSION	v10_10_00d00
FCL_FILE	/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/240fabb25ac9c9fd4d5f1b1a3e02a99c0623590d/atm-truth-vtx-reco.fcl
FCL_SECONDARY	cafmaker_atmos_dune10kt_1x2x6_runreco-nuenergy-nuangular_geov5.fcl
NUM_EVENTS	200
XML_MASTER	/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/240fabb25ac9c9fd4d5f1b1a3e02a99c0623590d/PandoraSettings_Master_Atmos_DUNEFD_MC.xml
XML_NEUTRINO	/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/240fabb25ac9c9fd4d5f1b1a3e02a99c0623590d/PandoraSettings_Neutrino_Atmos_DUNEFD_MC.xml

File states

Total files	Finding	Unallocated	Allocated	Outputting	Processed	Not found	Failed
1000	0	0	0	0	0	0	1000

Job states

Total	Submitted	Started	Processing	Outputting	Finished	Notused	Aborted	Stalled	Jobscript error	Outputting failed	None processed
7642	0	0	0	0	1640	0	912	107	156	4827	0

RSEs used

Name	Inputs	Outputs
PRAGUE	2834	0
RAL_ECHO	735	0
QMUL	567	0
RAL-PP	567	0
SURFSARA	524	0
NIKHEF	512	0
DUNE_FR_CCIN2P3_DISK	166	0
DUNE_ES_PIC	95	0

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

Site	Allocated	Outputting
UK_Manchester	261	820
CZ_FZU	113	380
UK_QMUL	94	286
UK_RAL-PPD	82	270
ES_PIC	62	496
CERN	62	361
US_FNAL-FermiGrid	45	443
UK_RAL-Tier1	27	115
NL_SURFsara	27	130
UK_Lancaster	22	157
US_UChicago	19	64
UK_Glasgow	15	92
UK_Oxford	15	154
FR_CCIN2P3	11	49
BR_CBPF	8	40
US_UCSD	8	26
US_FNAL-T1	3	10
US_PuertoRico	3	13
UK_Durham	3	46
US_Wisconsin	2	12
UK_Bristol	2	16
NL_NIKHEF	1	2

Jobscript

#!/bin/bash
:<<'EOF'
This jobscript generates CaloHitList-based graph data 
from input reco2 ROOT files using your custom LArSoft setup.

Required environment variables:
  - FCL_FILE
  - CODE_TAR_DIR_LOCAL
  - DUNE_VERSION
  - DUNE_QUALIFIER
  - XML_MASTER
  - XML_NEUTRINO
  - NUM_EVENTS (optional)
  - FCL_SECONDARY (optional)
EOF

# === Setup FCL and version info ===

DUNE_VERSION=${DUNE_VERSION}
DUNE_QUALIFIER=${DUNE_QUALIFIER}

# === Number of events option ===
if [ -n "$NUM_EVENTS" ]; then
  events_option="-n $NUM_EVENTS"
fi

# === Get a file from justIN ===
did_pfn_rse=$($JUSTIN_PATH/justin-get-file)
if [ -z "$did_pfn_rse" ]; then
  echo "No file assigned. Exiting jobscript."
  exit 0
fi

# === Track input DID for MetaCat ===
echo "$did_pfn_rse" | cut -f1 -d' ' >> all-input-dids.txt

# === Parse PFN from DID ===
pfn=$(echo "$did_pfn_rse" | cut -d' ' -f2)
echo "Input PFN = $pfn"

# === Setup DUNE software ===
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"

# === Mirror CODE_TAR_DIR_LOCAL ===
INPUT_TAR_DIR_LOCAL="$CODE_TAR_DIR_LOCAL"
echo "INPUT_TAR_DIR_LOCAL = $INPUT_TAR_DIR_LOCAL"

# === Setup custom code ===
if [ -n "$CODE_TAR_DIR_LOCAL" ]; then
  echo "Using local products from $CODE_TAR_DIR_LOCAL"
  source "$CODE_TAR_DIR_LOCAL/larsoft_truth_vtx_1010/localProducts_larsoft_v10_10_00_e26_prof/setup-grid"
  mrbslp
fi

# === Generate common timestamp and random suffix for output renaming ===
timestamp=$(date -u +"%Y-%m-%dT_%H%M%SZ")
rand_suffix=$((1 + RANDOM % 10))

# === Output file naming ===
fname=$(basename "$pfn" .root)
outFile="${fname}_truthvtx_${timestamp}.root"
logFile="truthvtx_${timestamp}_vtx.log"

# === Set FW search path ===
XML_DIR_MASTER=$(dirname "$XML_MASTER")
XML_DIR_NEUTRINO=$(dirname "$XML_NEUTRINO")
export FW_SEARCH_PATH="$XML_DIR_MASTER:$XML_DIR_NEUTRINO:$FW_SEARCH_PATH"
echo $FW_SEARCH_PATH

# === Run lar (primary) ===
export LD_PRELOAD=${XROOTD_LIB}/libXrdPosixPreload.so
echo "Running LArSoft with FCL: $FCL_FILE"
lar -c "$FCL_FILE" $events_option -o "$outFile" -s "$pfn" > "$logFile" 2>&1
larExit=$?


###################run caf ###################

if [ -n "$FCL_SECONDARY" ]; then
  caf_timestamp=$(date -u +"%Y-%m-%dT_%H%M%SZ")
  secondary_out="caf_${fname}_truthvtx_${caf_timestamp}.root"
  secondary_log="caf_${fname}_truthvtx_${caf_timestamp}.log"
  echo "Running CAF step with FCL_SECONDARY: $FCL_SECONDARY using reco output: $outFile"
  lar -c "$FCL_SECONDARY" $events_option -o "$secondary_out" -s "$outFile" > "$secondary_log" 2>&1

  # === Rename CAF output root file to include timestamp if needed ===
  new_caf_out="caf_truthvtx_${caf_timestamp}_caf.root"
  mv caf.root "$new_caf_out"
  echo "Renamed caf.root -> $new_caf_out"

fi





# === Show lar log tail ===
echo '=== Start last 100 lines of lar log file ==='
tail -100 "$logFile"
echo '=== End last 100 lines of lar log file ==='



# === Show lar log tail ===
echo '=== Start last 100 lines of lar log file ==='
tail -100 "$secondary_log"
echo '=== End last  100 lines of lar log file ==='



# === Mark processed ===
if [ $larExit -eq 0 ]; then
  echo "$pfn" > justin-processed-pfns.txt
  jobscriptExit=0
else
  jobscriptExit=1
fi

# === Package logs ===
tar zcf "${JUSTIN_JOBSUB_ID//[@]/_}.logs.tgz" *.log

# === Display output summary ===
echo "=== Generated output files ==="
ls -1 *.* 2>/dev/null | grep -v 'all-input-dids.txt' || echo "No output files found."

exit $jobscriptExit
# === Package logs ===
tar zcf "${JUSTIN_JOBSUB_ID//[@]/_}.logs.tgz" *.log

# === Display output summary ===
echo "=== Generated output files ==="
ls -1 *.* 2>/dev/null | grep -v 'all-input-dids.txt' || echo "No output files found."

exit $jobscriptExit

justIN time: 2025-09-19 02:23:32 UTC       justIN version: 01.05.00