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Workflow 1913, Stage 1

Priority50
Processors1
Wall seconds80000
Image/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes4194304000 (4000 MiB)
Max distance for inputs3000.0
Enabled input RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites BR_CBPF, CA_SFU, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Glasgow, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scopeusertests
Events for this stage

Output patterns

 DestinationPatternLifetimeFor next stageRSE expression
1https://fndcadoor.fnal.gov:2880/dune/scratch/users/ichong/fnal/01913/1*_caf.root

Environment variables

NameValue
CODE_TAR_DIR_LOCAL/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/2bb739fa8328d5424945e0da9e26ee51730d3245
DUNE_QUALIFIERe26:prof
DUNE_VERSIONv10_10_00d00
FCL_FILE/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/240fabb25ac9c9fd4d5f1b1a3e02a99c0623590d/atm-truth-vtx-reco.fcl
FCL_SECONDARYcafmaker_atmos_dune10kt_1x2x6_runreco-nuenergy-nuangular_geov5.fcl
NUM_EVENTS200
XML_MASTER/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/240fabb25ac9c9fd4d5f1b1a3e02a99c0623590d/PandoraSettings_Master_Atmos_DUNEFD_MC.xml
XML_NEUTRINO/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/240fabb25ac9c9fd4d5f1b1a3e02a99c0623590d/PandoraSettings_Neutrino_Atmos_DUNEFD_MC.xml

File states

Total filesFindingUnallocatedAllocatedOutputtingProcessedNot foundFailed
100050049700003

Job states

TotalSubmittedStartedProcessingOutputtingFinishedNotusedAbortedStalledJobscript errorOutputting failedNone processed
629000000809345060
Replicas per RSE500479.6502857789934199.97191536149958500321.97495955452996321.8702718858976453282.4548563687926194.3384953138852295.9780571447574170.5302976308353851314.77090771513053151.336492212754646336.3757715964156138.161507231217945358.960289493565130.8233525365094512373.7274838684542128.886986812386086378.4310001675403128.71168991988836Replicas per RSEFNAL_DCACHE (39%)PRAGUE (39%)RAL_ECHO (4%)RAL-PP (4%)NIKHEF (4%)SURFSARA (3%)QMUL (3%)DUNE_FR_CCIN2P3_DISK (0%)DUNE_ES_PIC (0%)

RSEs used

NameInputsOutputs
PRAGUE3410
SURFSARA710
RAL-PP600
NIKHEF580
RAL_ECHO400
QMUL350
DUNE_ES_PIC130
DUNE_FR_CCIN2P3_DISK110

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

SiteAllocatedOutputting
CERN20130
US_FNAL-FermiGrid18161
NL_SURFsara1167
UK_QMUL913
US_UChicago931
UK_Bristol711
CZ_FZU624
UK_Glasgow34
UK_Durham212
UK_Lancaster220
UK_RAL-Tier1215
BR_CBPF09
UK_RAL-PPD05
ES_PIC03
UK_Manchester01

Jobscript

#!/bin/bash
:<<'EOF'
This jobscript generates CaloHitList-based graph data 
from input reco2 ROOT files using your custom LArSoft setup.

Required environment variables:
  - FCL_FILE
  - CODE_TAR_DIR_LOCAL
  - DUNE_VERSION
  - DUNE_QUALIFIER
  - XML_MASTER
  - XML_NEUTRINO
  - NUM_EVENTS (optional)
  - FCL_SECONDARY (optional)
EOF

# === Setup FCL and version info ===

DUNE_VERSION=${DUNE_VERSION}
DUNE_QUALIFIER=${DUNE_QUALIFIER}

# === Number of events option ===
if [ -n "$NUM_EVENTS" ]; then
  events_option="-n $NUM_EVENTS"
fi

# === Get a file from justIN ===
did_pfn_rse=$($JUSTIN_PATH/justin-get-file)
if [ -z "$did_pfn_rse" ]; then
  echo "No file assigned. Exiting jobscript."
  exit 0
fi

# === Track input DID for MetaCat ===
echo "$did_pfn_rse" | cut -f1 -d' ' >> all-input-dids.txt

# === Parse PFN from DID ===
pfn=$(echo "$did_pfn_rse" | cut -d' ' -f2)
echo "Input PFN = $pfn"

# === Setup DUNE software ===
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"

# === Mirror CODE_TAR_DIR_LOCAL ===
INPUT_TAR_DIR_LOCAL="$CODE_TAR_DIR_LOCAL"
echo "INPUT_TAR_DIR_LOCAL = $INPUT_TAR_DIR_LOCAL"

# === Setup custom code ===
if [ -n "$CODE_TAR_DIR_LOCAL" ]; then
  echo "Using local products from $CODE_TAR_DIR_LOCAL"
  source "$CODE_TAR_DIR_LOCAL/larsoft_truth_vtx_1010/localProducts_larsoft_v10_10_00_e26_prof/setup-grid"
  mrbslp
fi

# === Generate common timestamp and random suffix for output renaming ===
timestamp=$(date -u +"%Y-%m-%dT_%H%M%SZ")
rand_suffix=$((1 + RANDOM % 10))

# === Output file naming ===
fname=$(basename "$pfn" .root)
outFile="${fname}_truthvtx_${timestamp}.root"
logFile="truthvtx_${timestamp}_vtx.log"

# === Set FW search path ===
XML_DIR_MASTER=$(dirname "$XML_MASTER")
XML_DIR_NEUTRINO=$(dirname "$XML_NEUTRINO")
export FW_SEARCH_PATH="$XML_DIR_MASTER:$XML_DIR_NEUTRINO:$FW_SEARCH_PATH"
echo $FW_SEARCH_PATH

# === Run lar (primary) ===
export LD_PRELOAD=${XROOTD_LIB}/libXrdPosixPreload.so
echo "Running LArSoft with FCL: $FCL_FILE"
lar -c "$FCL_FILE" $events_option -o "$outFile" -s "$pfn" > "$logFile" 2>&1
larExit=$?


###################run caf ###################

if [ -n "$FCL_SECONDARY" ]; then
  caf_timestamp=$(date -u +"%Y-%m-%dT_%H%M%SZ")
  secondary_out="caf_${fname}_truthvtx_${caf_timestamp}.root"
  secondary_log="caf_${fname}_truthvtx_${caf_timestamp}.log"
  echo "Running CAF step with FCL_SECONDARY: $FCL_SECONDARY using reco output: $outFile"
  lar -c "$FCL_SECONDARY" $events_option -o "$secondary_out" -s "$outFile" > "$secondary_log" 2>&1

  # === Rename CAF output root file to include timestamp if needed ===
  new_caf_out="caf_truthvtx_${caf_timestamp}_caf.root"
  mv caf.root "$new_caf_out"
  echo "Renamed caf.root -> $new_caf_out"

fi





# === Show lar log tail ===
echo '=== Start last 100 lines of lar log file ==='
tail -100 "$logFile"
echo '=== End last 100 lines of lar log file ==='



# === Show lar log tail ===
echo '=== Start last 100 lines of lar log file ==='
tail -100 "$secondary_log"
echo '=== End last  100 lines of lar log file ==='



# === Mark processed ===
if [ $larExit -eq 0 ]; then
  echo "$pfn" > justin-processed-pfns.txt
  jobscriptExit=0
else
  jobscriptExit=1
fi

# === Package logs ===
tar zcf "${JUSTIN_JOBSUB_ID//[@]/_}.logs.tgz" *.log

# === Display output summary ===
echo "=== Generated output files ==="
ls -1 *.* 2>/dev/null | grep -v 'all-input-dids.txt' || echo "No output files found."

exit $jobscriptExit
# === Package logs ===
tar zcf "${JUSTIN_JOBSUB_ID//[@]/_}.logs.tgz" *.log

# === Display output summary ===
echo "=== Generated output files ==="
ls -1 *.* 2>/dev/null | grep -v 'all-input-dids.txt' || echo "No output files found."

exit $jobscriptExit
justIN time: 2025-09-19 03:27:10 UTC       justIN version: 01.05.00