Workflow 307, Stage 1

Priority	50
Processors	1
Wall seconds	7200
Image	/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes	8388608000 (8000 MiB)
Max distance for inputs	100.0
Enabled input RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites	BR_CBPF, CA_SFU, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Glasgow, UK_Imperial, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scope	usertests
Events for this stage

Output patterns

	Destination	Pattern
1	https://fndcadoor.fnal.gov:2880/dune/scratch/users/chappell/pdhd_1gev/fnal/00307/1	hits*.root
2	https://fndcadoor.fnal.gov:2880/dune/scratch/users/chappell/pdhd_1gev/fnal/00307/1	mc*.root
3	https://fndcadoor.fnal.gov:2880/dune/scratch/users/chappell/pdhd_1gev/fnal/00307/1	events*.root

Environment variables

Name	Value
INPUT_TAR_DIR_LOCAL	/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/dd106ead2961314fadcc4940f74c557dc159220a
NUM_EVENTS	2

File states

Total files	Finding	Unallocated	Allocated	Outputting	Processed	Not found	Failed
1	0	0	0	0	1	0	0

Job states

Total	Submitted	Started	Processing	Outputting	Finished	Notused	Aborted	Stalled	Jobscript error	Outputting failed	None processed
2	0	0	0	0	2	0	0	0	0	0	0

RSEs used

Name	Inputs	Outputs
MONTECARLO	1	0

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

Jobscript

#!/bin/bash
# fcl file and DUNE software version/qualifier to be used
FCL_FILE=prod_beam_cosmics_1GeV_protodunehd.fcl
DUNE_VERSION=${DUNE_VERSION:-v09_85_00d00}
DUNE_QUALIFIER=${DUNE_QUALIFIER:-e26:prof}
export FW_SEARCH_PATH=$FW_SEARCH_PATH:$INPUT_TAR_DIR_LOCAL
export FHICL_FILE_PATH=.:$FHICL_FILE_PATH
echo $FW_SEARCH_PATH

cp $INPUT_TAR_DIR_LOCAL/*.fcl .
cp $INPUT_TAR_DIR_LOCAL/*.xml .
cp $INPUT_TAR_DIR_LOCAL/setup-grid .
cp -r $INPUT_TAR_DIR_LOCAL/localProducts* .

# number of events to process from the input file
if [ "$NUM_EVENTS" != "" ] ; then
 events_option="-n $NUM_EVENTS"
fi

# First get an unprocessed file from this stage
did_pfn_rse=`$JUSTIN_PATH/justin-get-file`

if [ "$did_pfn_rse" = "" ] ; then
  echo "Nothing to process - exit jobscript"
  exit 0
fi

# Keep a record of all input DIDs, for pdjson2meta file -> DID mapping
echo "$did_pfn_rse" | cut -f1 -d' ' >>all-input-dids.txt

# pfn is also needed when creating justin-processed-pfns.txt
pfn=`echo $did_pfn_rse | cut -f2 -d' '`
echo "Input PFN = $pfn"

# Setup DUNE environment
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh

# the xroot lib for streaming non-root files is in testproducts, 
# so add it to the start of the path
export PRODUCTS=/cvmfs/dune.opensciencegrid.org/products/dune/testproducts:${PRODUCTS}
setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"
export OMP_NUM_THREADS=${JUSTIN_PROCESSORS} 

source setup-grid
mrbslp


# Construct outFile from input $pfn 
now=$(date -u +"%Y-%m-%dT_%H%M%SZ")
Ffname=`echo $pfn | awk -F/ '{print $NF}'`
fname=`echo $Ffname | awk -F. '{print $1}'`

campaign="justIN.r${JUSTIN_WORKFLOW_ID}s${JUSTIN_STAGE_ID}"

(
# Do the scary preload stuff in a subshell!
export LD_PRELOAD=${XROOTD_LIB}/libXrdPosixPreload.so
echo "$LD_PRELOAD"

lar -c $FCL_FILE $events_option -o pdhd_gen.root > ${fname}_pdhd_${now}.log 2>&1 \
&& lar -c standard_g4_protodunehd.fcl -s pdhd_gen.root -o pdhd_g4.root > ${fname}_pdhd_g4_${now}.log 2>&1 \
&& lar -c standard_detsim_protodunehd.fcl -s pdhd_g4.root -o pdhd_detsim.root > ${fname}_pdhd_detsim_${now}.log 2>&1 \
&& lar -c standard_reco_protodunehd.fcl -s pdhd_detsim.root -o pdhd_reco.root > ${fname}_pdhd_reco_${now}.log 2>&1
)

# Subshell exits with exit code of last command
larExit=$?
echo "lar exit code $larExit"
echo "$pfn" > justin-processed-pfns.txt
#mv pdhd_gen.root pdhd_gen_${fname}.root
#mv pdhd_g4.root pdhd_g4_${fname}.root
#mv pdhd_detsim.root pdhd_detsim_${fname}.root
#mv pdhd_reco.root pdhd_reco_${fname}.root
#mv Pandora_Events.pndr Pandora_Events_${fname}.pndr
mv hits.root hits_${fname}.root
mv hits3D.root hits3D_${fname}.root
mv mc.root mc_${fname}.root
mv events.root events_${fname}.root

ls -lRS

# Create compressed tar file with all log files 
tar zcf `echo "$JUSTIN_JOBSUB_ID.logs.tgz" | sed 's/@/_/g'` *.log
exit $larExit