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Workflow 643, Stage 1

Priority	50
Processors	1
Wall seconds	18000
Image	/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes	4194304000 (4000 MiB)
Max distance for inputs	100.0
Enabled input RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites	BR_CBPF, CA_SFU, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Glasgow, UK_Imperial, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scope	usertests
Events for this stage

Output patterns

	Destination	Pattern	Lifetime	For next stage	RSE expression
1	https://fndcadoor.fnal.gov:2880/dune/scratch/users/pgranger/fnal/00643/1	caf_fd*.root

Environment variables

Name	Value
CODE_TAR_DIR_LOCAL	/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/77bde15fa509d0f93131802e0d65821efa1ff0ff
DUNE_QUALIFIER
DUNE_VERSION
FCL_FILE
HAS_ART_OUTPUT	false

File states

Total files	Finding	Unallocated	Allocated	Outputting	Processed	Not found	Failed
1000	0	0	0	0	896	0	104

Job states

Total	Submitted	Started	Processing	Outputting	Finished	Notused	Aborted	Stalled	Jobscript error	Outputting failed	None processed
2264	0	0	0	0	2039	0	78	92	53	2	0

RSEs used

Name	Inputs	Outputs
PRAGUE	1266	0
RAL_ECHO	265	0
RAL-PP	246	0
QMUL	219	0
SURFSARA	176	0
NIKHEF	173	0
DUNE_FR_CCIN2P3_DISK	88	0
DUNE_ES_PIC	23	0
None	0	138

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

Site	Allocated	Outputting
UK_QMUL	302	0
UK_Manchester	188	0
NL_SURFsara	188	1
UK_RAL-Tier1	85	8
ES_PIC	81	0
US_FNAL-FermiGrid	62	0
UK_Imperial	50	0
NL_NIKHEF	45	0
US_Wisconsin	27	0
UK_RAL-PPD	19	0
CZ_FZU	14	0
US_UChicago	12	0
CERN	10	0
UK_Edinburgh	10	0
UK_Lancaster	8	0
FR_CCIN2P3	3	0

Jobscript

#!/bin/bash
#
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
setup metacat
export METACAT_SERVER_URL=https://metacat.fnal.gov:9443/dune_meta_prod/app
export METACAT_AUTH_SERVER_URL=https://metacat.fnal.gov:8143/auth/dune


##TODO -- write usage

#CAF_FCL="cafmaker_dunevd10kt_1x8x6_3view_30deg_runreco-nuenergy_geov3.fcl"
CAF_FCL="cafmaker_atmos_dune10kt_1x2x6_runreco-nuenergy-nuangular_geov5.fcl"
echo "Using CAF fcl: ${CAF_FCL}"

export INPUT_TAR_DIR_LOCAL=${CODE_TAR_DIR_LOCAL}

if [ ! -z "$CODE_TAR_DIR_LOCAL" ]; then
	echo "Using custom sources from $CODE_TAR_DIR_LOCAL"
	source ${CODE_TAR_DIR_LOCAL}/*/localProducts*/setup-grid
	mrbslp
fi

#Setup recent lar software suite
# setup dunesw \
#    "${DUNE_VERSION:-v09_91_01d00}" \
#    -q "${DUNE_QUALIFIER:-e26:prof}"
#echo "printing env"
#env
 

if [ -z ${JUSTIN_PROCESSORS} ]; then
  JUSTIN_PROCESSORS=1
fi

echo "Justin processors: ${JUSTIN_PROCESSORS}"

export TF_NUM_THREADS=${JUSTIN_PROCESSORS}   
export OPENBLAS_NUM_THREADS=${JUSTIN_PROCESSORS} 
export JULIA_NUM_THREADS=${JUSTIN_PROCESSORS} 
export MKL_NUM_THREADS=${JUSTIN_PROCESSORS} 
export NUMEXPR_NUM_THREADS=${JUSTIN_PROCESSORS} 
export OMP_NUM_THREADS=${JUSTIN_PROCESSORS}  

#
echo "Will use justin-get-file"

now=$(date -u +"%Y%m%dT%H%M%SZ")


for nf in {1..10}
  do
  DID_PFN_RSE=`$JUSTIN_PATH/justin-get-file` 
 ##Check that any file was returned
 if [ "${DID_PFN_RSE}" == "" ] ; then
   echo "Could not get file"
#   exit 0
   continue
 fi

FILE=`echo ${DID_PFN_RSE} | cut -f2 -d' '`
DID=`echo ${DID_PFN_RSE} | cut -f1 -d' '`
 echo ${DID} >> did.list
 echo ${FILE} >> file.list 
done

#Exit if file.list does not exist
if [ ! -f file.list ] ; then
  echo "Nothing to process - exit jobscript"
  exit 0
fi


now=$(date -u +"%Y%m%dT%H%M%SZ")
 
####Run cafmaker
 
echo "now run lar on these files"

cat file.list
cat did.list
 
# echo $FILE 
# lar -c  "${CAF_FCL}" "$FILE"  
lar -c  "${CAF_FCL}" -S file.list > caf_$now.log

larExit=$?
echo "lar exit code $larExit"

echo '=== Start last 100 lines of lar log file ==='
tail -100 ${fname}_reco_${now}.log
echo '=== End last 100 lines of lar log file ==='

if [ $larExit -eq 0 ] ; then
  # Success !
  echo "$pfn" > justin-processed-pfns.txt
  jobscriptExit=0
else
  # Oh :(
  jobscriptExit=1
fi

# echo "$FILE" > justin-processed-pfns.txt
  cat file.list > justin-processed-pfns.txt

  echo "processed files"
cat justin-processed-pfns.txt 

  cp justin-processed-pfns.txt caf_$now.pfns 
  cat did.list >> caf_$now.did
  cat file.list >> caf_$now.file
  cp caf.root caf_fd_hd_atmo_${JUSTIN_WORKFLOW_ID}_$now.root
#  cp caf.root.json caf_$now.root.json

ls -lRS

# Create compressed tar file with all log files 
tar zcf `echo "$JUSTIN_JOBSUB_ID.logs.tgz" | sed 's/@/_/g'` *.log
exit $jobscriptExit
 

justIN time: 2025-09-19 08:27:12 UTC       justIN version: 01.05.00