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Workflow 8199, Stage 1

Priority50
Processors1
Wall seconds80000
Image/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes4194304000 (4000 MiB)
Max distance for inputs100.0
Enabled input RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites BR_CBPF, CA_SFU, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Glasgow, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scopefardet-hd
Events for this stage

Output patterns

 DestinationPatternLifetimeFor next stageRSE expression
1Rucio fardet-hd:fardet-hd-detsim_8199-fnal-w8199s1p1*detsim.root51840000False

Environment variables

NameValue
INPUT_DIR/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/d2443a4ed282614839d687453fa2503665500c79

File states

Total filesFindingUnallocatedAllocatedOutputtingProcessedNot foundFailed
100000886300113700

Job states

TotalSubmittedStartedProcessingOutputtingFinishedNotusedAbortedStalledJobscript errorOutputting failedNone processed
288000001114030313890173
Files processed00100100200200300300400400500500600600Sep-28 19:00Sep-28 20:00Sep-28 21:00Sep-28 22:00Sep-28 23:00Files processedBin start timesNumber per binUK_GlasgowUK_BristolNL_SURFsaraUK_DurhamUK_QMULUK_OxfordUK_ManchesterUK_RAL-Tier1UK_LancasterNL_NIKHEFUK_RAL-PPDFR_CCIN2P3US_UChicagoES_PICUS_WisconsinCZ_FZUUS_FNAL-FermiG…US_FNAL-FermiGridCERNIT_CNAFUS_UCSDUK_SheffieldBR_CBPF

RSEs used

NameInputsOutputs
MONTECARLO19060
DUNE_US_FNAL_DISK_STAGE01067
QMUL011
DUNE_US_BNL_SDCC04
DUNE_CERN_EOS02
SURFSARA01
DUNE_UK_MANCHESTER_CEPH01
NIKHEF01

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

SiteAllocatedOutputting
UK_Manchester59113
IT_CNAF1753
UK_RAL-PPD1384
ES_PIC957
UK_Bristol810
US_FNAL-FermiGrid747
UK_RAL-Tier1459
UK_QMUL454
CZ_FZU414
US_UChicago347
UK_Glasgow25
UK_Oxford214
BR_CBPF13
US_UCSD10
UK_Durham029
NL_SURFsara018
UK_Lancaster014
NL_NIKHEF07
CERN06
FR_CCIN2P301

Jobscript

#!/bin/bash
#
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
setup metacat
export METACAT_SERVER_URL=https://metacat.fnal.gov:9443/dune_meta_prod/app
export METACAT_AUTH_SERVER_URL=https://metacat.fnal.gov:8143/auth/dune

#Setup recent lar software suite
setup dunesw \
   "${DUNE_VERSION:-v10_06_00d01}" \
   -q "${DUNE_QUALIFIER:-e26:prof}"
echo "printing env"


if [ -z ${JUSTIN_PROCESSORS} ]; then
  JUSTIN_PROCESSORS=1
fi

echo "Justin processors: ${JUSTIN_PROCESSORS}"

export TF_NUM_THREADS=${JUSTIN_PROCESSORS}   
export OPENBLAS_NUM_THREADS=${JUSTIN_PROCESSORS} 
export JULIA_NUM_THREADS=${JUSTIN_PROCESSORS} 
export MKL_NUM_THREADS=${JUSTIN_PROCESSORS} 
export NUMEXPR_NUM_THREADS=${JUSTIN_PROCESSORS} 
export OMP_NUM_THREADS=${JUSTIN_PROCESSORS}  

#env
#echo "Will use justin-get-file"
DID_PFN_RSE=`$JUSTIN_PATH/justin-get-file`
if [ "${DID_PFN_RSE}" == "" ] ; then
  echo "Could not get file"
  exit 0
fi
pfn=`echo ${DID_PFN_RSE} | cut -f2 -d' '` 

if [ -z ${LINENUMBER} ] ; then
  LINENUMBER=$pfn
fi

# echo "linenumber " $LINENUMBER
ex_code=0
pstep=10
tstep=0

now=$(date -u +"%Y%m%dT%H%M%SZ")
namespace=${JUSTIN_SCOPE:-"usertests"} 

echo "===============JUSTIN_JOBSUB_ID"
runid=$JUSTIN_WORKFLOW_ID
CLUSTER=`echo $JUSTIN_JOBSUB_ID | awk '{split($0,a,"."); print a[1]}'`
echo $CLUSTER

# define run number and set number of events 
firstsubrun=0
#nevts=100
#nevts=50
nevts=10
e_pfn=$(echo "$pfn" | sed 's/^0*//')
start_e_pfn=$((e_pfn -1))
firstevent=$((start_e_pfn * nevts + 1)) 

echo "======checking===="
echo ${DID_PFN_RSE} 
echo ${pfn}
echo $runid 
echo $firstsubrun
echo $nevts
echo $firstevent


 
 


# Run Generator
echo "============generator=========================" 
prodname="prodbackground_radiological_decay0_dune10kt_1x2x6_lateralAPA_${now}_gen_${pfn}" 
istep=1
tstep=$((tstep+1))
nstep=$(($pstep*$tstep)) 
tcode=$((nstep+istep))
tcode=$((tcode*1000)) 

lar -c prodbackground_radiological_decay0_dune10kt_1x2x6_lateralAPA.fcl -o ${prodname}.root -n $nevts -e ${runid}:${firstsubrun}:${firstevent}
 
exit_code=$?  
ex_code=$((exit_code+tcode))
files=`ls *_${now}_*`  
if [ $exit_code -ne 0 ]; then
 echo "ERROR: lar (generation) exit code: $ex_code " 
 echo "output files size: "
     for f in $files 
      do
       size=`stat -c %s $f`
       echo   $f $size 
      done   
 return $ex_code 
fi
 
#  Stage 1 G4
echo "============G4 stage1=========================" 
g4_name="${prodname}_supernova_g4"
tstep=$((tstep+1))
nstep=$(($pstep*$tstep)) 
istep=1 
tcode=$((nstep+istep))
tcode=$((tcode*1000))
 
lar -c supernova_g4_halfActiveVol_dune10kt_1x2x6.fcl  ${prodname}.root -o ${g4_name}.root -n -1

exit_code=$?    
ex_code=$((exit_code+tcode))
files=`ls *_${now}_*`  
if [ $exit_code -ne 0 ]; then
  echo "ERROR: lar (geant4 step1) exit code: $ex_code " 
   echo "output files size: "
     for f in $files 
      do
       size=`stat -c %s $f`
       echo   $f $size 
      done   
  return $ex_code 
fi
#  Stage 2 G4 
tstep=$((tstep+1))
nstep=$(($pstep*$tstep)) 
istep=1 
tcode=$((nstep+istep))
tcode=$((tcode*1000))
 
# Detsim
echo "============detsim========================="  
detsim_name="${g4_name}_detsim"
tstep=$((tstep+1))
nstep=$(($pstep*$tstep)) 
istep=1  
tcode=$((nstep+istep))
tcode=$((tcode*1000))

lar -c   detsim_dune10kt_1x2x6_notpcsigproc.fcl  ${g4_name}.root  -o ${detsim_name}.root -n -1

exit_code=$?    
ex_code=$((exit_code+tcode))
files=`ls *_${now}_*`  
if [ $exit_code -ne 0 ]; then 
  echo "ERROR: lar (detsim) exit code: $ex_code " 
  echo "output files size: "
     for f in $files 
      do
       size=`stat -c %s $f`
       echo   $f $size 
      done   
  return $ex_code 
fi 
  
extractor_prod.py --infile ${detsim_name}.root --no_crc    --appfamily art --appname detsim --appversion  v10_06_00d01  --requestid ritm2469557  --strip_parents --input_json ${INPUT_DIR}/trg_input.json> ${detsim_name}.root.ext.json  && sed -i -e 's/stepfcl/detsim_dune10kt_1x2x6_notpcsigproc.fcl/g'  -e 's/physics/fardet-hd/g'  ${detsim_name}.root.ext.json 

exit_code=$?   
ex_code=$((exit_code+tcode))
files=`ls *_${now}_*`  
if [ $exit_code -gt 1 ]; then 
  echo "ERROR: metadata generation   $ex_code " 
   echo "output files size: "
     for f in $files 
      do
       size=`stat -c %s $f`
       echo   $f $size 
      done   
 return $ex_code 
fi 
 

rm -fr all-input-dids.txt
echo "noparents:noparents.root" > all-input-dids.txt 
python ${INPUT_DIR}/pdjson2metadata ${detsim_name}.root.ext.json  all-input-dids.txt usertests > ${detsim_name}.root.temp.json 
sed '/DUNE/ s/.*/\L&/' ${detsim_name}.root.temp.json > ${detsim_name}.root.json 
exit_code=$?    
ex_code=$((exit_code+tcode))
files=`ls *_${now}_*` 
if [ $exit_code -ne 0 ]; then
  echo "ERROR: metadata writing  $ex_code " 
   echo "output files size: "
     for f in $files 
      do
       size=`stat -c %s $f`
       echo   $f $size 
      done   
  return $ex_code 
fi  
 
if [ $? -ne 0 ]
then
  echo "Exiting with error"
  exit 1
else
  files=`ls *_${now}_*`
   for f in $files
      do
       size=`stat -c %s $f`
       echo "written output file: $f $size"
      done

  echo "$pfn" > justin-processed-pfns.txt
fi
justIN time: 2025-11-03 18:43:14 UTC       justIN version: 01.05.01