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Workflow 8928, Stage 1

Priority50
Processors1
Wall seconds80000
Image/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes8387559424 (7999 MiB)
Max distance for inputs100.0
Enabled input RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites BR_CBPF, CA_SFU, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scopeusertests
Events for this stage

Output patterns

 DestinationPatternLifetimeFor next stageRSE expression
1https://fndcadoor.fnal.gov:2880/dune/scratch/users/jjo/fnal/08928/1*_reco.root

Environment variables

NameValue
INPUT_TAR_DIR_LOCAL/cvmfs/fifeuser4.opensciencegrid.org/sw/dune/8b0e7165f7d07f75169666bfa371fcff00129ed0
NUM_EVENTS10
RECO_FCL/cvmfs/fifeuser4.opensciencegrid.org/sw/dune/8b0e7165f7d07f75169666bfa371fcff00129ed0/protodunevd_reco_nopds.fcl

File states

Total filesFindingUnallocatedAllocatedOutputtingProcessedNot foundFailed
50000500

Job states

TotalSubmittedStartedProcessingOutputtingFinishedNotusedAbortedStalledJobscript errorOutputting failedNone processed
800008000000
Files processed0011223344Oct-13 16:00Oct-13 17:00Oct-13 18:00Oct-13 19:00Files processedBin start timesNumber per binUS_WisconsinUS_FNAL-FermiG…US_FNAL-FermiGridUK_Sheffield

RSEs used

NameInputsOutputs
MONTECARLO50
None05

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

Jobscript

#!/bin/bash
#
# protodunevd_test.jobscript
# Simple testing jobscript to run a short ProtoDUNE-VD chain (20 events per file)
#

# ---- Setup environment ----
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh

# Use requested version and qualifier
setup dunesw v10_10_05d00 -q e26:prof
if [ $? -ne 0 ]; then
  echo "Error setting up dunesw v10_05_02d00"
  exit 1
fi

if [ -n "${INPUT_TAR_DIR_LOCAL:-}" ]; then
  export FCL_SEARCH_PATH="${INPUT_TAR_DIR_LOCAL}:${FCL_SEARCH_PATH}"
fi

# Choose which reco FHiCL to run
# Prefer explicit path in CVMFS if available; otherwise fall back to bare name
if [ -n "${INPUT_TAR_DIR_LOCAL:-}" ] && [ -f "${INPUT_TAR_DIR_LOCAL}/protodunevd_reco_nopds.fcl" ]; then
  RECO_FCL="${RECO_FCL:-${INPUT_TAR_DIR_LOCAL}/protodunevd_reco_nopds.fcl}"
else
  RECO_FCL="${RECO_FCL:-protodunevd_reco_nopds.fcl}"
fi
echo "Using RECO_FCL = ${RECO_FCL}"



# Parallelism
if [ -z "${JUSTIN_PROCESSORS}" ]; then
  JUSTIN_PROCESSORS=1
fi
export TF_NUM_THREADS=${JUSTIN_PROCESSORS}
export OPENBLAS_NUM_THREADS=${JUSTIN_PROCESSORS}
export JULIA_NUM_THREADS=${JUSTIN_PROCESSORS}
export MKL_NUM_THREADS=${JUSTIN_PROCESSORS}
export NUMEXPR_NUM_THREADS=${JUSTIN_PROCESSORS}
export OMP_NUM_THREADS=${JUSTIN_PROCESSORS}

# ---- Get one input file ----
did_pfn_rse=`$JUSTIN_PATH/justin-get-file`
if [ "${did_pfn_rse}" == "" ] ; then
  echo "No unprocessed files available, exiting."
  exit 0
fi

did=`echo $did_pfn_rse | cut -f1 -d' '`
pfn=`echo $did_pfn_rse | cut -f2 -d' '`
rse=`echo $did_pfn_rse | cut -f3 -d' '`
name_only=$(echo $did | cut -f2 -d':')

echo "Processing file: $pfn"
echo "RSE: $rse"
echo "DID: $did"

# ---- Set event count ----
nevents=20

# ---- Timestamp for unique output names ----
now=$(date -u +"%Y%m%dT%H%M%SZ")
jobid=`echo "${JUSTIN_JOBSUB_ID:-1}" | cut -f1 -d'@' | sed -e "s/\./_/"`
stageid=${JUSTIN_STAGE_ID:-1}

# ---- LArSoft chain ----
echo "Running ProtoDUNE-VD GEN --> G4 --> DETSIM --> RECO chain"

# 1. GEN
lar -n ${nevents} -c gen_protodunevd_cosmics.fcl \
    -o gen.root
if [ $? -ne 0 ]; then echo "GEN failed"; exit 1; fi

# 2. G4 stage 1
lar -c protodunevd_g4_stage1.fcl -o g4_stage1.root gen.root
if [ $? -ne 0 ]; then echo "G4 stage1 failed"; exit 1; fi

# 3. G4 stage 2
lar -c protodunevd_g4_stage2_nopds.fcl -o g4_stage2.root g4_stage1.root
if [ $? -ne 0 ]; then echo "G4 stage2 failed"; exit 1; fi

# 4. DETSIM
lar -c protodunevd_detsim_nopds.fcl -o detsim.root g4_stage2.root
if [ $? -ne 0 ]; then echo "Detsim failed"; exit 1; fi

# 5. RECO
outFile=${name_only}_${jobid}_${stageid}_${now}_reco.root
lar -c "${RECO_FCL}" -o "${outFile}" detsim.root
#lar -c protodunevd_reco_nopds.fcl -o ${outFile} detsim.root
if [ $? -ne 0 ]; then echo "Reco failed"; exit 1; fi

# ---- Mark as processed ----
echo "$pfn" > justin-processed-pfns.txt

echo "Job completed successfully."
ls -lh *.root

exit 0
justIN time: 2025-11-03 18:43:12 UTC       justIN version: 01.05.01