Workflow 8928, Stage 1
| Priority | 50 |
| Processors | 1 |
| Wall seconds | 80000 |
| Image | /cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest |
| RSS bytes | 8387559424 (7999 MiB) |
| Max distance for inputs | 100.0 |
| Enabled input RSEs |
CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC |
| Enabled output RSEs |
CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC |
| Enabled sites |
BR_CBPF, CA_SFU, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin |
| Scope | usertests |
| Events for this stage |
Output patterns
| | Destination | Pattern | Lifetime | For next stage | RSE expression |
|---|
| 1 | https://fndcadoor.fnal.gov:2880/dune/scratch/users/jjo/fnal/08928/1 | *_reco.root | | | |
Environment variables
| Name | Value |
|---|
| INPUT_TAR_DIR_LOCAL | /cvmfs/fifeuser4.opensciencegrid.org/sw/dune/8b0e7165f7d07f75169666bfa371fcff00129ed0 |
| NUM_EVENTS | 10 |
| RECO_FCL | /cvmfs/fifeuser4.opensciencegrid.org/sw/dune/8b0e7165f7d07f75169666bfa371fcff00129ed0/protodunevd_reco_nopds.fcl |
File states
| Total files | Finding | Unallocated | Allocated | Outputting | Processed | Not found | Failed |
|---|
|
| 5 | 0 | 0 | 0 | 0 | 5 | 0 | 0 |
Job states
| Total | Submitted | Started | Processing | Outputting | Finished | Notused | Aborted | Stalled | Jobscript error | Outputting failed | None processed |
|---|
| 8 | 0 | 0 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 0 |
RSEs used
| Name | Inputs | Outputs |
|---|
| MONTECARLO | 5 | 0 |
| None | 0 | 5 |
Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)
Jobscript
#!/bin/bash
#
# protodunevd_test.jobscript
# Simple testing jobscript to run a short ProtoDUNE-VD chain (20 events per file)
#
# ---- Setup environment ----
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
# Use requested version and qualifier
setup dunesw v10_10_05d00 -q e26:prof
if [ $? -ne 0 ]; then
echo "Error setting up dunesw v10_05_02d00"
exit 1
fi
if [ -n "${INPUT_TAR_DIR_LOCAL:-}" ]; then
export FCL_SEARCH_PATH="${INPUT_TAR_DIR_LOCAL}:${FCL_SEARCH_PATH}"
fi
# Choose which reco FHiCL to run
# Prefer explicit path in CVMFS if available; otherwise fall back to bare name
if [ -n "${INPUT_TAR_DIR_LOCAL:-}" ] && [ -f "${INPUT_TAR_DIR_LOCAL}/protodunevd_reco_nopds.fcl" ]; then
RECO_FCL="${RECO_FCL:-${INPUT_TAR_DIR_LOCAL}/protodunevd_reco_nopds.fcl}"
else
RECO_FCL="${RECO_FCL:-protodunevd_reco_nopds.fcl}"
fi
echo "Using RECO_FCL = ${RECO_FCL}"
# Parallelism
if [ -z "${JUSTIN_PROCESSORS}" ]; then
JUSTIN_PROCESSORS=1
fi
export TF_NUM_THREADS=${JUSTIN_PROCESSORS}
export OPENBLAS_NUM_THREADS=${JUSTIN_PROCESSORS}
export JULIA_NUM_THREADS=${JUSTIN_PROCESSORS}
export MKL_NUM_THREADS=${JUSTIN_PROCESSORS}
export NUMEXPR_NUM_THREADS=${JUSTIN_PROCESSORS}
export OMP_NUM_THREADS=${JUSTIN_PROCESSORS}
# ---- Get one input file ----
did_pfn_rse=`$JUSTIN_PATH/justin-get-file`
if [ "${did_pfn_rse}" == "" ] ; then
echo "No unprocessed files available, exiting."
exit 0
fi
did=`echo $did_pfn_rse | cut -f1 -d' '`
pfn=`echo $did_pfn_rse | cut -f2 -d' '`
rse=`echo $did_pfn_rse | cut -f3 -d' '`
name_only=$(echo $did | cut -f2 -d':')
echo "Processing file: $pfn"
echo "RSE: $rse"
echo "DID: $did"
# ---- Set event count ----
nevents=20
# ---- Timestamp for unique output names ----
now=$(date -u +"%Y%m%dT%H%M%SZ")
jobid=`echo "${JUSTIN_JOBSUB_ID:-1}" | cut -f1 -d'@' | sed -e "s/\./_/"`
stageid=${JUSTIN_STAGE_ID:-1}
# ---- LArSoft chain ----
echo "Running ProtoDUNE-VD GEN --> G4 --> DETSIM --> RECO chain"
# 1. GEN
lar -n ${nevents} -c gen_protodunevd_cosmics.fcl \
-o gen.root
if [ $? -ne 0 ]; then echo "GEN failed"; exit 1; fi
# 2. G4 stage 1
lar -c protodunevd_g4_stage1.fcl -o g4_stage1.root gen.root
if [ $? -ne 0 ]; then echo "G4 stage1 failed"; exit 1; fi
# 3. G4 stage 2
lar -c protodunevd_g4_stage2_nopds.fcl -o g4_stage2.root g4_stage1.root
if [ $? -ne 0 ]; then echo "G4 stage2 failed"; exit 1; fi
# 4. DETSIM
lar -c protodunevd_detsim_nopds.fcl -o detsim.root g4_stage2.root
if [ $? -ne 0 ]; then echo "Detsim failed"; exit 1; fi
# 5. RECO
outFile=${name_only}_${jobid}_${stageid}_${now}_reco.root
lar -c "${RECO_FCL}" -o "${outFile}" detsim.root
#lar -c protodunevd_reco_nopds.fcl -o ${outFile} detsim.root
if [ $? -ne 0 ]; then echo "Reco failed"; exit 1; fi
# ---- Mark as processed ----
echo "$pfn" > justin-processed-pfns.txt
echo "Job completed successfully."
ls -lh *.root
exit 0