Workflow 9823, Stage 1

Workflow	9823
Priority	50
Processors	1
Wall seconds	80000
Image	/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes	8387559424 (7999 MiB)
Max distance for inputs	100.0
Enabled input RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites	BR_CBPF, CA_SFU, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scope	usertests
Events for this stage

Output patterns

	Destination	Pattern	Lifetime	For next stage	RSE expression
1	https://fndcadoor.fnal.gov:2880/dune/scratch/users/jjo/fnal/09823/1	*_reco.root

Environment variables

Name	Value
NUM_EVENTS	20

File states

Total files	Finding	Unallocated	Allocated	Outputting	Processed	Not found	Failed
5	0	2	0	0	0	0	3

Job states

Total	Submitted	Started	Processing	Outputting	Finished	Notused	Aborted	Stalled	Jobscript error	Outputting failed	None processed
19	0	0	0	0	0	0	0	0	19	0	0

RSEs used

Name	Inputs	Outputs
MONTECARLO	19	0

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

Jobscript

#!/bin/bash
#
# protodunehd_test.jobscript
# Simple testing jobscript to run a short ProtoDUNE-HD chain (20 events per file)
#

# ---- Setup environment ----
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh

# Use requested version and qualifier
setup dunesw v10_10_05d00 -q e26:prof
if [ $? -ne 0 ]; then
  echo "Error setting up dunesw v10_05_02d00"
  exit 1
fi

# Parallelism
if [ -z "${JUSTIN_PROCESSORS}" ]; then
  JUSTIN_PROCESSORS=1
fi
export TF_NUM_THREADS=${JUSTIN_PROCESSORS}
export OPENBLAS_NUM_THREADS=${JUSTIN_PROCESSORS}
export JULIA_NUM_THREADS=${JUSTIN_PROCESSORS}
export MKL_NUM_THREADS=${JUSTIN_PROCESSORS}
export NUMEXPR_NUM_THREADS=${JUSTIN_PROCESSORS}
export OMP_NUM_THREADS=${JUSTIN_PROCESSORS}

# ---- Get one input file ----
did_pfn_rse=`$JUSTIN_PATH/justin-get-file`
if [ "${did_pfn_rse}" == "" ] ; then
  echo "No unprocessed files available, exiting."
  exit 0
fi

did=`echo $did_pfn_rse | cut -f1 -d' '`
pfn=`echo $did_pfn_rse | cut -f2 -d' '`
rse=`echo $did_pfn_rse | cut -f3 -d' '`
name_only=$(echo $did | cut -f2 -d':')

echo "Processing file: $pfn"
echo "RSE: $rse"
echo "DID: $did"

# ---- Set event count ----
nevents=20

# ---- Timestamp for unique output names ----
now=$(date -u +"%Y%m%dT%H%M%SZ")
jobid=`echo "${JUSTIN_JOBSUB_ID:-1}" | cut -f1 -d'@' | sed -e "s/\./_/"`
stageid=${JUSTIN_STAGE_ID:-1}

# ---- LArSoft chain ----
echo "Running ProtoDUNE-HD GEN --> G4 --> DETSIM --> RECO chain"

# 1. GEN
lar -n ${nevents} -c /pnfs/dune/scratch/users/jjo/temp/pdhd_1GeV_h4input_cosmics.fcl \
    -o gen.root \
    /pnfs/dune/scratch/users/jjo/temp/H4_v34b_1GeV_-27.7_10M_710.root
if [ $? -ne 0 ]; then echo "GEN failed"; exit 1; fi

# 2. G4 stage 1
lar -c standard_g4_protodunehd_stage1.fcl -o g4_stage1.root gen.root
if [ $? -ne 0 ]; then echo "G4 stage1 failed"; exit 1; fi

# 3. G4 stage 2
lar -c standard_g4_protodunehd_stage2.fcl -o g4_stage2.root g4_stage1.root
if [ $? -ne 0 ]; then echo "G4 stage2 failed"; exit 1; fi

# 4. DETSIM
lar -c /pnfs/dune/scratch/users/jjo/temp/standard_detsim_protodunehd.fcl -o detsim.root g4_stage2.root
if [ $? -ne 0 ]; then echo "Detsim failed"; exit 1; fi

# 5. RECO
outFile=${name_only}_${jobid}_${stageid}_${now}_reco.root
lar -c /pnfs/dune/scratch/users/jjo/temp/standard_reco_protodunehd_MC.fcl -o ${outFile} detsim.root
if [ $? -ne 0 ]; then echo "Reco failed"; exit 1; fi

# ---- Mark as processed ----
echo "$pfn" > justin-processed-pfns.txt

echo "Job completed successfully."
ls -lh *.root

exit 0