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Workflow 12080, Stage 4

Workflow	12080
Campaign	479
Priority	50
Processors	1
Wall seconds	28800
Image	/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes	4194304000 (4000 MiB)
Max distance for inputs	30.0
Enabled input RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites	BR_CBPF, CA_SFU, CA_Victoria, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Glasgow, UK_Imperial, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_BNL, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_NotreDame, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scope	usertests
Events for this stage

Output patterns

	Destination	Pattern	Lifetime	For next stage	RSE expression
1	Rucio usertests:fnal-w12080s4p1	*_reco.root	7776000	False	DUNE_US_FNAL_DISK_STAGE
2	Rucio usertests:fnal-w12080s4p2	*_larcv.root	7776000	False	DUNE_US_FNAL_DISK_STAGE

Environment variables

Name	Value
JOB_FHICL_FILE	standard_mythical_supera_dune10kt_1x2x6.fcl

File states

Total files	Finding	Unallocated	Allocated	Outputting	Processed	Not found	Failed
6990	0	4	0	0	6960	0	26

Job states

Total	Submitted	Started	Processing	Outputting	Finished	Notused	Aborted	Stalled	Jobscript error	Outputting failed	None processed
19263	0	0	0	0	16752	3	2027	352	123	6	0

RSEs used

Name	Inputs	Outputs
DUNE_US_BNL_SDCC	2165	2634
DUNE_US_FNAL_DISK_STAGE	1367	3744
PRAGUE	768	860
NIKHEF	595	1968
DUNE_UK_MANCHESTER_CEPH	563	1013
DUNE_IT_INFN_CNAF	459	316
RAL-PP	396	534
DUNE_CA_SFU	346	516
RAL_ECHO	271	980
QMUL	251	815
DUNE_FR_CCIN2P3_DISK	145	378
DUNE_CERN_EOS	71	68
DUNE_UK_LANCASTER_CEPH	32	68
DUNE_ES_PIC	30	26

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

Site	Allocated	Outputting
CA_SFU	330	7
US_UCSD	7	0
US_FNAL-FermiGrid	7	0
NL_NIKHEF	6	0
US_UChicago	5	0
ES_PIC	3	0
UK_Imperial	1	0
UK_RAL-Tier1	1	0
US_BNL	1	0
UK_QMUL	1	0
CZ_FZU	1	0

Jobscript

#!/bin/bash
#set -euo pipefail

echo "=== RECO job starting ==="
echo "Host: $(hostname)"
echo "PWD(cmd): $(/bin/pwd -P || pwd || true)"
echo "PWD(var): ${PWD:-unset}"
echo "JUSTIN_PATH=${JUSTIN_PATH:-unset}"
echo "JUSTIN_INPUT_FILE=${JUSTIN_INPUT_FILE:-unset}"

# ----------------------------------------------------------------------
# Allocate the input file via justIN (robust)
# ----------------------------------------------------------------------
if [[ -z "${JUSTIN_PATH:-}" ]]; then
  echo "ERROR: JUSTIN_PATH is not set (not running under justIN wrapper?)"
  exit 2
fi

alloc="$("$JUSTIN_PATH/justin-get-file")"
if [[ -z "$alloc" ]]; then
  echo "No more inputs allocated for this stage; exiting cleanly."
  exit 0
fi

did="$(echo "$alloc" | awk '{print $1}')"
pfn="$(echo "$alloc" | awk '{print $2}')"
rse="$(echo "$alloc" | awk '{print $3}')"
echo "Allocated input: did=$did pfn=$pfn rse=$rse"

INPUT_DETSIM="${pfn:-}"
if [[ -z "${INPUT_DETSIM}" ]]; then
  echo "ERROR: allocator returned empty PFN"
  exit 3
fi

echo "G4 input file: ${INPUT_DETSIM}"

# Output value of expected input environment variables
echo "fhicl file: ${JOB_FHICL_FILE}"

# Work in the sandbox
cd $PWD

# ----------------------------------------------------------------------
# Grab the tarball that has our fhicl files we'll need
# ----------------------------------------------------------------------
FCL_TGZ_URL="https://raw.githubusercontent.com/SFBayLaser/dune-justin/main/bundles/fhicl_bundle.tgz"
curl -L -o fhicl_bundle.tgz "$FCL_TGZ_URL"
tar xzf fhicl_bundle.tgz

# ----------------------------------------------------------------------
# Environment setup
# ----------------------------------------------------------------------
echo "Sourcing DUNE setup..."
#set +u
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
#set -u

setup dunesw v10_16_00d00 -q e26:prof

ups active
lar --version

# ----------------------------------------------------------------------
# Point fhicl to our local files
# ----------------------------------------------------------------------
export FHICL_FILE_PATH="$PWD/fhicl:${FHICL_FILE_PATH:-.}"

# ----------------------------------------------------------------------
# Run Reco
# ----------------------------------------------------------------------
FCL=${JOB_FHICL_FILE}

# Output filename derived from input (your preferred convention)
INBASE="$(basename "${INPUT_DETSIM}" .root)"
OUTFILE="${INBASE}_reco.root"

echo "Running lar DETSIM:"
echo "  FCL:     ${FCL}"
echo "  Input:   ${INPUT_DETSIM}"
echo "  Output:  ${OUTFILE}"

lar -c "${FCL}" -s "${INPUT_DETSIM}" -o "${OUTFILE}" -n -1

# ----------------------------------------------------------------------
# rename larcv file
# ----------------------------------------------------------------------
LARCVNAME="${INBASE}_reco_larcv.root"
mv -v larcv.root "${LARCVNAME}"

# ----------------------------------------------------------------------
# Sanity checks
# ----------------------------------------------------------------------
test -f "${OUTFILE}" || { echo "ERROR: Output file ${OUTFILE} not produced!"; exit 1; }
test -f "${LARCVNAME}" || { echo "ERROR: Output file ${LARCVNAME} not produced!"; exit 1; }

echo "Sandbox folder contains:"
ls -lh $PWD

# ----------------------------------------------------------------------
# Tell justIN we successfully processed the allocated input
# ----------------------------------------------------------------------
echo "$did" >> justin-processed-dids.txt
echo "Wrote processed DID: $did"

echo "=== RECOjob completed successfully ==="

justIN time: 2026-02-04 04:26:00 UTC       justIN version: 01.06.00